RNA–Protein interactions for RNA: ENST00000295890.8

COX18-201, Transcript of cytochrome c oxidase assembly factor COX18, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COX18, Length 6,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX18-201ENST00000295890 LORP23490 312 aaPredicted RBP5.35□□□□□ -1.55
COX18-201ENST00000295890 KRTAP12-3P60328 96 aa5.34□□□□□ -1.56
COX18-201ENST00000295890 KRTAP3-2Q9BYR7 98 aa5.33□□□□□ -1.56
COX18-201ENST00000295890 KRTAP10-5P60370 271 aa5.32□□□□□ -1.56
COX18-201ENST00000295890 KRTAP8-1Q8IUC2 63 aa5.32□□□□□ -1.56
COX18-201ENST00000295890 FRAS1Q86XX4 4008 aa5.14□□□□□ -1.59
COX18-201ENST00000295890 DNAH9Q9NYC9 4486 aa5.11□□□□□ -1.59
COX18-201ENST00000295890 MT1HP80294 61 aa5.11□□□□□ -1.59
COX18-201ENST00000295890 DNAH10Q8IVF4 4471 aa5.08□□□□□ -1.6
COX18-201ENST00000295890 KRTAP4-1Q9BYQ7 146 aa5.07□□□□□ -1.6
COX18-201ENST00000295890 DNAH1Q9P2D7 4330 aa5.04□□□□□ -1.6
COX18-201ENST00000295890 DNAH5Q8TE73 4624 aa5.02□□□□□ -1.61
COX18-201ENST00000295890 KRTAP23-1A1A580 65 aa5.01□□□□□ -1.61
COX18-201ENST00000295890 SPRR2FQ96RM1 72 aa5□□□□□ -1.61
COX18-201ENST00000295890 MT2AP02795 61 aa4.97□□□□□ -1.61
COX18-201ENST00000295890 ANK2Q01484 3957 aa4.96□□□□□ -1.62
COX18-201ENST00000295890 LYSTQ99698 3801 aa4.94□□□□□ -1.62
COX18-201ENST00000295890 PLECQ15149 4684 aaKnown RBP4.92□□□□□ -1.62
COX18-201ENST00000295890 KMT2AQ03164 3969 aa4.89□□□□□ -1.63
COX18-201ENST00000295890 DNAH11Q96DT5 4516 aa4.89□□□□□ -1.63
COX18-201ENST00000295890 KRTAP10-7P60409 375 aaPredicted RBP4.89□□□□□ -1.63
COX18-201ENST00000295890 DNAH2Q9P225 4427 aa4.89□□□□□ -1.63
COX18-201ENST00000295890 CMYA5Q8N3K9 4069 aa4.87□□□□□ -1.63
COX18-201ENST00000295890 MT1FP04733 61 aa4.87□□□□□ -1.63
COX18-201ENST00000295890 SPRR2GQ9BYE4 73 aa4.8□□□□□ -1.64
COX18-201ENST00000295890 DNHD1Q96M86 4753 aa4.78□□□□□ -1.64
COX18-201ENST00000295890 KRTAP19-5Q3LI72 72 aa4.78□□□□□ -1.64
COX18-201ENST00000295890 FAT2Q9NYQ8 4349 aa4.77□□□□□ -1.65
COX18-201ENST00000295890 VPS13BQ7Z7G8 4022 aa4.76□□□□□ -1.65
COX18-201ENST00000295890 DNAH3Q8TD57 4116 aa4.76□□□□□ -1.65
COX18-201ENST00000295890 SPRR2EP22531 72 aa4.76□□□□□ -1.65
COX18-201ENST00000295890 SPRR2BP35325 72 aa4.76□□□□□ -1.65
COX18-201ENST00000295890 SPRR2AP35326 72 aa4.76□□□□□ -1.65
COX18-201ENST00000295890 VPS13DQ5THJ4 4388 aa4.74□□□□□ -1.65
COX18-201ENST00000295890 LRP1BQ9NZR2 4599 aa4.74□□□□□ -1.65
COX18-201ENST00000295890 DYNC1H1Q14204 4646 aaKnown RBP4.74□□□□□ -1.65
COX18-201ENST00000295890 DNAH17Q9UFH2 4485 aa4.74□□□□□ -1.65
COX18-201ENST00000295890 DNAH8Q96JB1 4490 aa4.72□□□□□ -1.65
COX18-201ENST00000295890 FAT1Q14517 4588 aa4.68□□□□□ -1.66
COX18-201ENST00000295890 RYR1P21817 5038 aa4.67□□□□□ -1.66
COX18-201ENST00000295890 DYNC2H1Q8NCM8 4307 aaKnown RBP4.65□□□□□ -1.66
COX18-201ENST00000295890 STARD9Q9P2P6 4700 aa4.64□□□□□ -1.67
COX18-201ENST00000295890 DNAH7Q8WXX0 4024 aa4.63□□□□□ -1.67
COX18-201ENST00000295890 SACSQ9NZJ4 4579 aa4.62□□□□□ -1.67
COX18-201ENST00000295890 LCE3CQ5T5A8 94 aa4.61□□□□□ -1.67
COX18-201ENST00000295890 SPRR2DP22532 72 aa4.6□□□□□ -1.67
COX18-201ENST00000295890 LCE3BQ5TA77 95 aa4.59□□□□□ -1.67
COX18-201ENST00000295890 DNAH6Q9C0G6 4158 aa4.58□□□□□ -1.68
COX18-201ENST00000295890 PRKDCP78527 4128 aaKnown RBP4.53□□□□□ -1.68
COX18-201ENST00000295890 KRTAP17-1Q9BYP8 105 aa4.52□□□□□ -1.69
COX18-201ENST00000295890 LCE2BO14633 110 aa4.51□□□□□ -1.69
COX18-201ENST00000295890 APOBP04114 4563 aaKnown RBP4.49□□□□□ -1.69
COX18-201ENST00000295890 RYR3Q15413 4870 aa4.47□□□□□ -1.69
COX18-201ENST00000295890 MT1GP13640 62 aa4.44□□□□□ -1.7
COX18-201ENST00000295890 FAT3Q8TDW7 4589 aa4.44□□□□□ -1.7
COX18-201ENST00000295890 KRTAP19-8Q3LI54 63 aa4.43□□□□□ -1.7
COX18-201ENST00000295890 HECTD4Q9Y4D8 3996 aa4.41□□□□□ -1.7
COX18-201ENST00000295890 KRTAP19-1Q8IUB9 90 aa4.41□□□□□ -1.7
COX18-201ENST00000295890 KRTAP12-4P60329 112 aa4.38□□□□□ -1.71
COX18-201ENST00000295890 LPAP08519 4548 aa4.38□□□□□ -1.71
COX18-201ENST00000295890 MT1XP80297 61 aa4.37□□□□□ -1.71
COX18-201ENST00000295890 KRTAP19-4Q3LI73 84 aa4.36□□□□□ -1.71
COX18-201ENST00000295890 KRTAP9-8Q9BYQ0 159 aa4.34□□□□□ -1.72
COX18-201ENST00000295890 KRTAP4-8A0A0G2JLE6 195 aa4.34□□□□□ -1.72
COX18-201ENST00000295890 KRTAP4-8Q9BYQ9 185 aa4.34□□□□□ -1.72
COX18-201ENST00000295890 MT1BP07438 61 aa4.33□□□□□ -1.72
COX18-201ENST00000295890 LRP1Q07954 4544 aaKnown RBP4.31□□□□□ -1.72
COX18-201ENST00000295890 KRTAP9-3Q9BYQ3 159 aa4.26□□□□□ -1.73
COX18-201ENST00000295890 LCE2CQ5TA81 110 aa4.23□□□□□ -1.73
COX18-201ENST00000295890 PKHD1L1Q86WI1 4243 aa4.23□□□□□ -1.73
COX18-201ENST00000295890 HERC1Q15751 4861 aa4.23□□□□□ -1.73
COX18-201ENST00000295890 MYCBP2O75592 4640 aa4.22□□□□□ -1.73
COX18-201ENST00000295890 LCE2DQ5TA82 110 aaPredicted RBP4.21□□□□□ -1.74
COX18-201ENST00000295890 RYR2Q92736 4967 aa4.2□□□□□ -1.74
COX18-201ENST00000295890 HSPG2P98160 4391 aa4.19□□□□□ -1.74
COX18-201ENST00000295890 KIAA1109Q2LD37 5005 aa4.18□□□□□ -1.74
COX18-201ENST00000295890 PKHD1P08F94 4074 aa4.17□□□□□ -1.74
COX18-201ENST00000295890 KRTAP9-2Q9BYQ4 174 aa4.16□□□□□ -1.74
COX18-201ENST00000295890 PKD1P98161 4303 aa4.15□□□□□ -1.75
COX18-201ENST00000295890 BIRC6Q9NR09 4857 aa4.14□□□□□ -1.75
COX18-201ENST00000295890 LCE3DQ9BYE3 92 aa4.14□□□□□ -1.75
COX18-201ENST00000295890 KRTAP4-7Q9BYR0 210 aa4.12□□□□□ -1.75
COX18-201ENST00000295890 MT4P47944 62 aa4.12□□□□□ -1.75
COX18-201ENST00000295890 KRTAP19-3Q7Z4W3 81 aa4.11□□□□□ -1.75
COX18-201ENST00000295890 HERC2O95714 4834 aa4.09□□□□□ -1.75
COX18-201ENST00000295890 PCLOQ9Y6V0 5065 aa4.03□□□□□ -1.76
COX18-201ENST00000295890 LCE3EQ5T5B0 92 aa4.02□□□□□ -1.77
COX18-201ENST00000295890 KRTAP9-6A0A140TA67 174 aa3.99□□□□□ -1.77
COX18-201ENST00000295890 MT1LQ93083 61 aa3.98□□□□□ -1.77
COX18-201ENST00000295890 TNXBP22105 4242 aa3.97□□□□□ -1.77
COX18-201ENST00000295890 MT1EP04732 61 aa3.97□□□□□ -1.77
COX18-201ENST00000295890 HYDINQ4G0P3 5121 aa3.96□□□□□ -1.77
COX18-201ENST00000295890 SPRR5A0A1B0GTR4 108 aa3.96□□□□□ -1.78
COX18-201ENST00000295890 LRP2P98164 4655 aa3.96□□□□□ -1.78
COX18-201ENST00000295890 LOC100996750A0A140TA64 210 aa3.94□□□□□ -1.78
COX18-201ENST00000295890 LCE1BQ5T7P3 118 aa3.92□□□□□ -1.78
COX18-201ENST00000295890 KRTAP19-6Q3LI70 58 aa3.91□□□□□ -1.78
COX18-201ENST00000295890 PRM1P04553 51 aa3.9□□□□□ -1.78
COX18-201ENST00000295890 KRTAP19-2Q3LHN2 52 aa3.89□□□□□ -1.79
COX18-201ENST00000295890 MT1MQ8N339 61 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms