RNA–Protein interactions for RNA: ENST00000294304.11

LRP5-201, Transcript of LDL receptor related protein 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP5, Length 5,159 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP5-201ENST00000294304 DNAH1Q9P2D7 4330 aa9.62□□□□□ -0.87
LRP5-201ENST00000294304 DNAH11Q96DT5 4516 aa9.52□□□□□ -0.89
LRP5-201ENST00000294304 VPS13DQ5THJ4 4388 aa9.47□□□□□ -0.89
LRP5-201ENST00000294304 KRTAP15-1Q3LI76 137 aa9.4□□□□□ -0.9
LRP5-201ENST00000294304 DNAH10Q8IVF4 4471 aa9.4□□□□□ -0.91
LRP5-201ENST00000294304 DNAH17Q9UFH2 4485 aa9.39□□□□□ -0.91
LRP5-201ENST00000294304 DYNC1H1Q14204 4646 aaKnown RBP9.33□□□□□ -0.92
LRP5-201ENST00000294304 STARD9Q9P2P6 4700 aa9.32□□□□□ -0.92
LRP5-201ENST00000294304 KRTAP10-12P60413 245 aa9.25□□□□□ -0.93
LRP5-201ENST00000294304 LRP1BQ9NZR2 4599 aa9.25□□□□□ -0.93
LRP5-201ENST00000294304 LORP23490 312 aaPredicted RBP9.24□□□□□ -0.93
LRP5-201ENST00000294304 FAT1Q14517 4588 aa9.21□□□□□ -0.94
LRP5-201ENST00000294304 PRKDCP78527 4128 aaKnown RBP9.15□□□□□ -0.94
LRP5-201ENST00000294304 KRTAP4-1Q9BYQ7 146 aa9.15□□□□□ -0.94
LRP5-201ENST00000294304 DNAH2Q9P225 4427 aa9.14□□□□□ -0.95
LRP5-201ENST00000294304 RYR1P21817 5038 aa9.1□□□□□ -0.95
LRP5-201ENST00000294304 ANK2Q01484 3957 aa9.08□□□□□ -0.96
LRP5-201ENST00000294304 DYNC2H1Q8NCM8 4307 aaKnown RBP9.06□□□□□ -0.96
LRP5-201ENST00000294304 DNAH3Q8TD57 4116 aa9.05□□□□□ -0.96
LRP5-201ENST00000294304 FAT2Q9NYQ8 4349 aa9.04□□□□□ -0.96
LRP5-201ENST00000294304 SACSQ9NZJ4 4579 aa9□□□□□ -0.97
LRP5-201ENST00000294304 KRTAP12-3P60328 96 aa8.97□□□□□ -0.97
LRP5-201ENST00000294304 KRTAP23-1A1A580 65 aa8.94□□□□□ -0.98
LRP5-201ENST00000294304 LCE3AQ5TA76 89 aa8.93□□□□□ -0.98
LRP5-201ENST00000294304 MT1HP80294 61 aa8.91□□□□□ -0.98
LRP5-201ENST00000294304 DNAH8Q96JB1 4490 aa8.91□□□□□ -0.98
LRP5-201ENST00000294304 KMT2AQ03164 3969 aa8.9□□□□□ -0.98
LRP5-201ENST00000294304 KIAA1109Q2LD37 5005 aa8.79□□□□□ -1
LRP5-201ENST00000294304 CRCT1Q9UGL9 99 aa8.77□□□□□ -1.01
LRP5-201ENST00000294304 MT2AP02795 61 aa8.76□□□□□ -1.01
LRP5-201ENST00000294304 APOBP04114 4563 aaKnown RBP8.76□□□□□ -1.01
LRP5-201ENST00000294304 VPS13BQ7Z7G8 4022 aa8.71□□□□□ -1.01
LRP5-201ENST00000294304 RYR3Q15413 4870 aa8.71□□□□□ -1.02
LRP5-201ENST00000294304 KRTAP17-1Q9BYP8 105 aa8.71□□□□□ -1.02
LRP5-201ENST00000294304 LYSTQ99698 3801 aa8.7□□□□□ -1.02
LRP5-201ENST00000294304 CMYA5Q8N3K9 4069 aa8.67□□□□□ -1.02
LRP5-201ENST00000294304 SPRR2GQ9BYE4 73 aa8.67□□□□□ -1.02
LRP5-201ENST00000294304 MT1FP04733 61 aa8.6□□□□□ -1.03
LRP5-201ENST00000294304 KRTAP8-1Q8IUC2 63 aa8.6□□□□□ -1.03
LRP5-201ENST00000294304 DNAH6Q9C0G6 4158 aa8.59□□□□□ -1.03
LRP5-201ENST00000294304 MYCBP2O75592 4640 aa8.56□□□□□ -1.04
LRP5-201ENST00000294304 RYR2Q92736 4967 aa8.52□□□□□ -1.05
LRP5-201ENST00000294304 INE1O15225 51 aa8.47□□□□□ -1.05
LRP5-201ENST00000294304 LRP1Q07954 4544 aaKnown RBP8.46□□□□□ -1.05
LRP5-201ENST00000294304 DNAH7Q8WXX0 4024 aa8.43□□□□□ -1.06
LRP5-201ENST00000294304 HECTD4Q9Y4D8 3996 aa8.39□□□□□ -1.07
LRP5-201ENST00000294304 FAT3Q8TDW7 4589 aa8.38□□□□□ -1.07
LRP5-201ENST00000294304 FRAS1Q86XX4 4008 aa8.35□□□□□ -1.07
LRP5-201ENST00000294304 HYDINQ4G0P3 5121 aa8.3□□□□□ -1.08
LRP5-201ENST00000294304 HERC2O95714 4834 aa8.29□□□□□ -1.08
LRP5-201ENST00000294304 BIRC6Q9NR09 4857 aa8.21□□□□□ -1.1
LRP5-201ENST00000294304 KRTAP19-1Q8IUB9 90 aa8.18□□□□□ -1.1
LRP5-201ENST00000294304 HSPG2P98160 4391 aa8.16□□□□□ -1.1
LRP5-201ENST00000294304 KRTAP19-8Q3LI54 63 aa8.13□□□□□ -1.11
LRP5-201ENST00000294304 KRTAP19-5Q3LI72 72 aa8.12□□□□□ -1.11
LRP5-201ENST00000294304 PKHD1P08F94 4074 aa8.06□□□□□ -1.12
LRP5-201ENST00000294304 LRP2P98164 4655 aa8.06□□□□□ -1.12
LRP5-201ENST00000294304 KRTAP10-5P60370 271 aa8.06□□□□□ -1.12
LRP5-201ENST00000294304 SPRR2FQ96RM1 72 aa8.05□□□□□ -1.12
LRP5-201ENST00000294304 KRTAP9-8Q9BYQ0 159 aa7.98□□□□□ -1.13
LRP5-201ENST00000294304 LCE2CQ5TA81 110 aa7.97□□□□□ -1.13
LRP5-201ENST00000294304 KRTAP10-7P60409 375 aaPredicted RBP7.95□□□□□ -1.14
LRP5-201ENST00000294304 HERC1Q15751 4861 aa7.93□□□□□ -1.14
LRP5-201ENST00000294304 PCLOQ9Y6V0 5065 aa7.93□□□□□ -1.14
LRP5-201ENST00000294304 PKD1P98161 4303 aa7.92□□□□□ -1.14
LRP5-201ENST00000294304 LCE3CQ5T5A8 94 aa7.91□□□□□ -1.14
LRP5-201ENST00000294304 MT1BP07438 61 aa7.89□□□□□ -1.15
LRP5-201ENST00000294304 MT1XP80297 61 aa7.88□□□□□ -1.15
LRP5-201ENST00000294304 KMT2CQ8NEZ4 4911 aaKnown RBP7.85□□□□□ -1.15
LRP5-201ENST00000294304 KRTAP19-4Q3LI73 84 aa7.8□□□□□ -1.16
LRP5-201ENST00000294304 KRTAP9-3Q9BYQ3 159 aa7.78□□□□□ -1.16
LRP5-201ENST00000294304 LPAP08519 4548 aa7.76□□□□□ -1.17
LRP5-201ENST00000294304 PKHD1L1Q86WI1 4243 aa7.74□□□□□ -1.17
LRP5-201ENST00000294304 KRTAP19-2Q3LHN2 52 aa7.68□□□□□ -1.18
LRP5-201ENST00000294304 TNXBP22105 4242 aa7.62□□□□□ -1.19
LRP5-201ENST00000294304 EPPK1P58107 5090 aaKnown RBP7.59□□□□□ -1.19
LRP5-201ENST00000294304 ABCA13Q86UQ4 5058 aa7.56□□□□□ -1.2
LRP5-201ENST00000294304 KRTAP4-8A0A0G2JLE6 195 aa7.55□□□□□ -1.2
LRP5-201ENST00000294304 KRTAP4-8Q9BYQ9 185 aa7.55□□□□□ -1.2
LRP5-201ENST00000294304 SPRR2EP22531 72 aa7.52□□□□□ -1.2
LRP5-201ENST00000294304 SPRR2BP35325 72 aa7.52□□□□□ -1.2
LRP5-201ENST00000294304 SPRR2AP35326 72 aa7.52□□□□□ -1.2
LRP5-201ENST00000294304 MUC17Q685J3 4493 aa7.46□□□□□ -1.22
LRP5-201ENST00000294304 LCE2BO14633 110 aa7.45□□□□□ -1.22
LRP5-201ENST00000294304 FLGP20930 4061 aaPredicted RBP7.38□□□□□ -1.23
LRP5-201ENST00000294304 MT1GP13640 62 aa7.35□□□□□ -1.23
LRP5-201ENST00000294304 SPRR2DP22532 72 aa7.27□□□□□ -1.25
LRP5-201ENST00000294304 SPRR5A0A1B0GTR4 108 aa7.24□□□□□ -1.25
LRP5-201ENST00000294304 LCE3BQ5TA77 95 aa7.2□□□□□ -1.26
LRP5-201ENST00000294304 FAT4Q6V0I7 4981 aa7.17□□□□□ -1.26
LRP5-201ENST00000294304 RNF213Q63HN8 5207 aa7.17□□□□□ -1.26
LRP5-201ENST00000294304 KRTAP19-3Q7Z4W3 81 aa7.12□□□□□ -1.27
LRP5-201ENST00000294304 UBR4Q5T4S7 5183 aa7.1□□□□□ -1.27
LRP5-201ENST00000294304 MT1LQ93083 61 aa7.09□□□□□ -1.27
LRP5-201ENST00000294304 MT1EP04732 61 aa7.08□□□□□ -1.28
LRP5-201ENST00000294304 LCE2AQ5TA79 106 aaPredicted RBP7.07□□□□□ -1.28
LRP5-201ENST00000294304 KRTAP19-6Q3LI70 58 aa7.06□□□□□ -1.28
LRP5-201ENST00000294304 KRTAP4-7Q9BYR0 210 aa7.03□□□□□ -1.28
LRP5-201ENST00000294304 KRTAP12-4P60329 112 aa7.03□□□□□ -1.28
LRP5-201ENST00000294304 KRTAP9-2Q9BYQ4 174 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms