RNA–Protein interactions for RNA: ENST00000290037.10

SEC16A-202, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 8,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-202ENST00000290037 DNAH7Q8WXX0 4024 aa6.13□□□□□ -1.43
SEC16A-202ENST00000290037 CMYA5Q8N3K9 4069 aa6.09□□□□□ -1.43
SEC16A-202ENST00000290037 LCE3AQ5TA76 89 aa6.08□□□□□ -1.44
SEC16A-202ENST00000290037 KRTAP8-1Q8IUC2 63 aa5.93□□□□□ -1.46
SEC16A-202ENST00000290037 SVEP1Q4LDE5 3571 aa5.91□□□□□ -1.46
SEC16A-202ENST00000290037 ZNF469Q96JG9 3925 aaPredicted RBP5.87□□□□□ -1.47
SEC16A-202ENST00000290037 HECTD4Q9Y4D8 3996 aa5.87□□□□□ -1.47
SEC16A-202ENST00000290037 ANK2Q01484 3957 aa5.87□□□□□ -1.47
SEC16A-202ENST00000290037 MUC3AQ02505 3323 aa5.83□□□□□ -1.48
SEC16A-202ENST00000290037 DNAH10Q8IVF4 4471 aa5.82□□□□□ -1.48
SEC16A-202ENST00000290037 DNAH2Q9P225 4427 aa5.82□□□□□ -1.48
SEC16A-202ENST00000290037 MT1HP80294 61 aa5.75□□□□□ -1.49
SEC16A-202ENST00000290037 LCE3CQ5T5A8 94 aa5.72□□□□□ -1.49
SEC16A-202ENST00000290037 KRTAP4-5Q9BYR2 181 aa5.71□□□□□ -1.5
SEC16A-202ENST00000290037 FRAS1Q86XX4 4008 aa5.71□□□□□ -1.5
SEC16A-202ENST00000290037 KRTAP19-8Q3LI54 63 aa5.7□□□□□ -1.5
SEC16A-202ENST00000290037 DYNC2H1Q8NCM8 4307 aaKnown RBP5.7□□□□□ -1.5
SEC16A-202ENST00000290037 LORP23490 312 aaPredicted RBP5.69□□□□□ -1.5
SEC16A-202ENST00000290037 MT2AP02795 61 aa5.69□□□□□ -1.5
SEC16A-202ENST00000290037 DNAH9Q9NYC9 4486 aa5.68□□□□□ -1.5
SEC16A-202ENST00000290037 VPS13BQ7Z7G8 4022 aa5.67□□□□□ -1.5
SEC16A-202ENST00000290037 KRTAP10-7P60409 375 aaPredicted RBP5.65□□□□□ -1.51
SEC16A-202ENST00000290037 DNAH11Q96DT5 4516 aa5.63□□□□□ -1.51
SEC16A-202ENST00000290037 VPS13DQ5THJ4 4388 aa5.63□□□□□ -1.51
SEC16A-202ENST00000290037 FAT2Q9NYQ8 4349 aa5.61□□□□□ -1.51
SEC16A-202ENST00000290037 KRTAP10-5P60370 271 aa5.6□□□□□ -1.51
SEC16A-202ENST00000290037 LYSTQ99698 3801 aa5.59□□□□□ -1.52
SEC16A-202ENST00000290037 PRKDCP78527 4128 aaKnown RBP5.58□□□□□ -1.52
SEC16A-202ENST00000290037 DYNC1H1Q14204 4646 aaKnown RBP5.56□□□□□ -1.52
SEC16A-202ENST00000290037 SPRR5A0A1B0GTR4 108 aa5.53□□□□□ -1.52
SEC16A-202ENST00000290037 CRCT1Q9UGL9 99 aa5.53□□□□□ -1.52
SEC16A-202ENST00000290037 CSMD2Q7Z408 3487 aa5.52□□□□□ -1.53
SEC16A-202ENST00000290037 DNAH17Q9UFH2 4485 aa5.49□□□□□ -1.53
SEC16A-202ENST00000290037 KRTAP4-1Q9BYQ7 146 aa5.49□□□□□ -1.53
SEC16A-202ENST00000290037 CSMD3Q7Z407 3707 aa5.48□□□□□ -1.53
SEC16A-202ENST00000290037 KRTAP19-5Q3LI72 72 aa5.46□□□□□ -1.54
SEC16A-202ENST00000290037 MT1FP04733 61 aa5.44□□□□□ -1.54
SEC16A-202ENST00000290037 DNAH5Q8TE73 4624 aa5.44□□□□□ -1.54
SEC16A-202ENST00000290037 KMT2AQ03164 3969 aa5.4□□□□□ -1.54
SEC16A-202ENST00000290037 DNAH8Q96JB1 4490 aa5.4□□□□□ -1.55
SEC16A-202ENST00000290037 FLGP20930 4061 aaPredicted RBP5.4□□□□□ -1.55
SEC16A-202ENST00000290037 LRP1Q07954 4544 aaKnown RBP5.38□□□□□ -1.55
SEC16A-202ENST00000290037 KRTAP19-1Q8IUB9 90 aa5.33□□□□□ -1.56
SEC16A-202ENST00000290037 SPRR2FQ96RM1 72 aa5.28□□□□□ -1.56
SEC16A-202ENST00000290037 PKHD1P08F94 4074 aa5.27□□□□□ -1.57
SEC16A-202ENST00000290037 PLECQ15149 4684 aaKnown RBP5.27□□□□□ -1.57
SEC16A-202ENST00000290037 MT1GP13640 62 aa5.27□□□□□ -1.57
SEC16A-202ENST00000290037 MT1XP80297 61 aa5.22□□□□□ -1.57
SEC16A-202ENST00000290037 STARD9Q9P2P6 4700 aa5.2□□□□□ -1.58
SEC16A-202ENST00000290037 KRTAP12-4P60329 112 aa5.18□□□□□ -1.58
SEC16A-202ENST00000290037 PKHD1L1Q86WI1 4243 aa5.16□□□□□ -1.58
SEC16A-202ENST00000290037 MYCBP2O75592 4640 aa5.12□□□□□ -1.59
SEC16A-202ENST00000290037 MT1LQ93083 61 aa5.11□□□□□ -1.59
SEC16A-202ENST00000290037 LRP1BQ9NZR2 4599 aa5.1□□□□□ -1.59
SEC16A-202ENST00000290037 KRTAP9-8Q9BYQ0 159 aa5.07□□□□□ -1.6
SEC16A-202ENST00000290037 MT1BP07438 61 aa5.06□□□□□ -1.6
SEC16A-202ENST00000290037 HSPG2P98160 4391 aa5.05□□□□□ -1.6
SEC16A-202ENST00000290037 SACSQ9NZJ4 4579 aa5.04□□□□□ -1.6
SEC16A-202ENST00000290037 LCE2BO14633 110 aa5.03□□□□□ -1.6
SEC16A-202ENST00000290037 KRTAP9-3Q9BYQ3 159 aa5.01□□□□□ -1.61
SEC16A-202ENST00000290037 APOBP04114 4563 aaKnown RBP4.99□□□□□ -1.61
SEC16A-202ENST00000290037 SPRR2EP22531 72 aa4.97□□□□□ -1.61
SEC16A-202ENST00000290037 SPRR2BP35325 72 aa4.97□□□□□ -1.61
SEC16A-202ENST00000290037 SPRR2AP35326 72 aa4.97□□□□□ -1.61
SEC16A-202ENST00000290037 MT1EP04732 61 aa4.97□□□□□ -1.61
SEC16A-202ENST00000290037 LCE3DQ9BYE3 92 aa4.95□□□□□ -1.62
SEC16A-202ENST00000290037 LCE3EQ5T5B0 92 aa4.94□□□□□ -1.62
SEC16A-202ENST00000290037 KRTAP19-3Q7Z4W3 81 aa4.93□□□□□ -1.62
SEC16A-202ENST00000290037 PKD1P98161 4303 aa4.92□□□□□ -1.62
SEC16A-202ENST00000290037 SPRR2DP22532 72 aa4.9□□□□□ -1.63
SEC16A-202ENST00000290037 LCE2CQ5TA81 110 aa4.89□□□□□ -1.63
SEC16A-202ENST00000290037 FAT1Q14517 4588 aa4.85□□□□□ -1.63
SEC16A-202ENST00000290037 FAT3Q8TDW7 4589 aa4.83□□□□□ -1.64
SEC16A-202ENST00000290037 TNXBP22105 4242 aa4.8□□□□□ -1.64
SEC16A-202ENST00000290037 LCE3BQ5TA77 95 aa4.79□□□□□ -1.64
SEC16A-202ENST00000290037 KRTAP19-6Q3LI70 58 aa4.77□□□□□ -1.65
SEC16A-202ENST00000290037 RYR1P21817 5038 aa4.76□□□□□ -1.65
SEC16A-202ENST00000290037 MT3P25713 68 aa4.73□□□□□ -1.65
SEC16A-202ENST00000290037 MT1MQ8N339 61 aa4.71□□□□□ -1.66
SEC16A-202ENST00000290037 KRTAP19-2Q3LHN2 52 aa4.71□□□□□ -1.66
SEC16A-202ENST00000290037 RYR2Q92736 4967 aa4.7□□□□□ -1.66
SEC16A-202ENST00000290037 RYR3Q15413 4870 aa4.67□□□□□ -1.66
SEC16A-202ENST00000290037 LCE2DQ5TA82 110 aaPredicted RBP4.63□□□□□ -1.67
SEC16A-202ENST00000290037 DNHD1Q96M86 4753 aa4.61□□□□□ -1.67
SEC16A-202ENST00000290037 MT1AP04731 61 aa4.58□□□□□ -1.68
SEC16A-202ENST00000290037 LCE1AQ5T7P2 110 aa4.55□□□□□ -1.68
SEC16A-202ENST00000290037 KRTAP2-3P0C7H8 128 aa4.53□□□□□ -1.68
SEC16A-202ENST00000290037 KRTAP2-4Q9BYR9 128 aa4.53□□□□□ -1.68
SEC16A-202ENST00000290037 KRTAP2-1Q9BYU5 128 aa4.53□□□□□ -1.68
SEC16A-202ENST00000290037 MUC17Q685J3 4493 aa4.49□□□□□ -1.69
SEC16A-202ENST00000290037 HERC1Q15751 4861 aa4.48□□□□□ -1.69
SEC16A-202ENST00000290037 KRTAP4-8A0A0G2JLE6 195 aa4.44□□□□□ -1.7
SEC16A-202ENST00000290037 KRTAP4-8Q9BYQ9 185 aa4.44□□□□□ -1.7
SEC16A-202ENST00000290037 KRTAP17-1Q9BYP8 105 aa4.42□□□□□ -1.7
SEC16A-202ENST00000290037 PCLOQ9Y6V0 5065 aa4.33□□□□□ -1.72
SEC16A-202ENST00000290037 KRTAP19-7Q3SYF9 63 aa4.32□□□□□ -1.72
SEC16A-202ENST00000290037 LCE2AQ5TA79 106 aaPredicted RBP4.31□□□□□ -1.72
SEC16A-202ENST00000290037 PRM1P04553 51 aa4.25□□□□□ -1.73
SEC16A-202ENST00000290037 LCE4AQ5TA78 99 aa4.24□□□□□ -1.73
SEC16A-202ENST00000290037 BIRC6Q9NR09 4857 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms