RNA–Protein interactions for RNA: ENST00000289893.8

MACF1-201, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 5 BASIC

Gene MACF1, Length 19,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-201ENST00000289893 MYO15AQ9UKN7 3530 aa1.63□□□□□ -2.15
MACF1-201ENST00000289893 KRTAP10-6P60371 365 aaPredicted RBP1.63□□□□□ -2.15
MACF1-201ENST00000289893 FAT3Q8TDW7 4589 aa1.63□□□□□ -2.15
MACF1-201ENST00000289893 FRAS1Q86XX4 4008 aa1.61□□□□□ -2.15
MACF1-201ENST00000289893 KRTAP10-12P60413 245 aa1.61□□□□□ -2.15
MACF1-201ENST00000289893 MT1HL1P0DM35 61 aa1.6□□□□□ -2.15
MACF1-201ENST00000289893 WDFY3Q8IZQ1 3526 aa1.6□□□□□ -2.15
MACF1-201ENST00000289893 DNAH6Q9C0G6 4158 aa1.6□□□□□ -2.15
MACF1-201ENST00000289893 DNAH3Q8TD57 4116 aa1.6□□□□□ -2.15
MACF1-201ENST00000289893 RELNP78509 3460 aa1.58□□□□□ -2.16
MACF1-201ENST00000289893 KRTAP12-3P60328 96 aa1.57□□□□□ -2.16
MACF1-201ENST00000289893 RYR2Q92736 4967 aa1.57□□□□□ -2.16
MACF1-201ENST00000289893 ASPMQ8IZT6 3477 aa1.56□□□□□ -2.16
MACF1-201ENST00000289893 PKD1P98161 4303 aa1.56□□□□□ -2.16
MACF1-201ENST00000289893 KRTAP19-4Q3LI73 84 aa1.55□□□□□ -2.16
MACF1-201ENST00000289893 TRRAPQ9Y4A5 3859 aa1.55□□□□□ -2.16
MACF1-201ENST00000289893 LCE2DQ5TA82 110 aaPredicted RBP1.55□□□□□ -2.16
MACF1-201ENST00000289893 BSNQ9UPA5 3926 aa1.55□□□□□ -2.16
MACF1-201ENST00000289893 RYR3Q15413 4870 aa1.55□□□□□ -2.16
MACF1-201ENST00000289893 LCE3AQ5TA76 89 aa1.54□□□□□ -2.16
MACF1-201ENST00000289893 KRTAP10-5P60370 271 aa1.53□□□□□ -2.16
MACF1-201ENST00000289893 RYR1P21817 5038 aa1.53□□□□□ -2.17
MACF1-201ENST00000289893 DMDP11532 3685 aa1.52□□□□□ -2.17
MACF1-201ENST00000289893 PRKDCP78527 4128 aaKnown RBP1.52□□□□□ -2.17
MACF1-201ENST00000289893 NBPF19A0A087WUL8 3843 aa1.52□□□□□ -2.17
MACF1-201ENST00000289893 CMYA5Q8N3K9 4069 aa1.51□□□□□ -2.17
MACF1-201ENST00000289893 LAMA5O15230 3695 aa1.51□□□□□ -2.17
MACF1-201ENST00000289893 CUBNO60494 3623 aa1.51□□□□□ -2.17
MACF1-201ENST00000289893 LCE2CQ5TA81 110 aa1.51□□□□□ -2.17
MACF1-201ENST00000289893 SPENQ96T58 3664 aaKnown RBP1.5□□□□□ -2.17
MACF1-201ENST00000289893 ANK2Q01484 3957 aa1.5□□□□□ -2.17
MACF1-201ENST00000289893 SMG1Q96Q15 3661 aaKnown RBP1.49□□□□□ -2.17
MACF1-201ENST00000289893 CSMD2Q7Z408 3487 aa1.48□□□□□ -2.17
MACF1-201ENST00000289893 HERC1Q15751 4861 aa1.48□□□□□ -2.17
MACF1-201ENST00000289893 LRP1Q07954 4544 aaKnown RBP1.48□□□□□ -2.17
MACF1-201ENST00000289893 PKHD1L1Q86WI1 4243 aa1.48□□□□□ -2.17
MACF1-201ENST00000289893 STARD9Q9P2P6 4700 aa1.48□□□□□ -2.17
MACF1-201ENST00000289893 DNAH7Q8WXX0 4024 aa1.47□□□□□ -2.17
MACF1-201ENST00000289893 KRTAP8-1Q8IUC2 63 aa1.47□□□□□ -2.17
MACF1-201ENST00000289893 LCE2BO14633 110 aa1.46□□□□□ -2.18
MACF1-201ENST00000289893 CSMD1Q96PZ7 3565 aa1.46□□□□□ -2.18
MACF1-201ENST00000289893 HERC2O95714 4834 aa1.45□□□□□ -2.18
MACF1-201ENST00000289893 KIAA1109Q2LD37 5005 aa1.45□□□□□ -2.18
MACF1-201ENST00000289893 PKHD1P08F94 4074 aa1.44□□□□□ -2.18
MACF1-201ENST00000289893 LORP23490 312 aaPredicted RBP1.44□□□□□ -2.18
MACF1-201ENST00000289893 MUC17Q685J3 4493 aa1.44□□□□□ -2.18
MACF1-201ENST00000289893 KRTAP4-5Q9BYR2 181 aa1.44□□□□□ -2.18
MACF1-201ENST00000289893 SVEP1Q4LDE5 3571 aa1.43□□□□□ -2.18
MACF1-201ENST00000289893 SPRR2GQ9BYE4 73 aa1.43□□□□□ -2.18
MACF1-201ENST00000289893 VPS13BQ7Z7G8 4022 aa1.43□□□□□ -2.18
MACF1-201ENST00000289893 TNXBP22105 4242 aa1.41□□□□□ -2.18
MACF1-201ENST00000289893 HECTD4Q9Y4D8 3996 aa1.41□□□□□ -2.18
MACF1-201ENST00000289893 CSMD3Q7Z407 3707 aa1.41□□□□□ -2.18
MACF1-201ENST00000289893 ABCA13Q86UQ4 5058 aa1.4□□□□□ -2.19
MACF1-201ENST00000289893 MT3P25713 68 aa1.39□□□□□ -2.19
MACF1-201ENST00000289893 HYDINQ4G0P3 5121 aa1.39□□□□□ -2.19
MACF1-201ENST00000289893 KRTAP10-7P60409 375 aaPredicted RBP1.37□□□□□ -2.19
MACF1-201ENST00000289893 KRTAP19-8Q3LI54 63 aa1.37□□□□□ -2.19
MACF1-201ENST00000289893 ZNF469Q96JG9 3925 aaPredicted RBP1.37□□□□□ -2.19
MACF1-201ENST00000289893 VPS13CQ709C8 3753 aa1.36□□□□□ -2.19
MACF1-201ENST00000289893 SPRR2FQ96RM1 72 aa1.36□□□□□ -2.19
MACF1-201ENST00000289893 LCE2AQ5TA79 106 aaPredicted RBP1.36□□□□□ -2.19
MACF1-201ENST00000289893 KRTAP19-5Q3LI72 72 aa1.35□□□□□ -2.19
MACF1-201ENST00000289893 MT1HP80294 61 aa1.34□□□□□ -2.19
MACF1-201ENST00000289893 MT2AP02795 61 aa1.34□□□□□ -2.2
MACF1-201ENST00000289893 EPPK1P58107 5090 aaKnown RBP1.34□□□□□ -2.2
MACF1-201ENST00000289893 LCE3CQ5T5A8 94 aa1.33□□□□□ -2.2
MACF1-201ENST00000289893 KRTAP4-1Q9BYQ7 146 aa1.33□□□□□ -2.2
MACF1-201ENST00000289893 LRP2P98164 4655 aa1.33□□□□□ -2.2
MACF1-201ENST00000289893 KMT2AQ03164 3969 aa1.33□□□□□ -2.2
MACF1-201ENST00000289893 LCE3BQ5TA77 95 aa1.33□□□□□ -2.2
MACF1-201ENST00000289893 LYSTQ99698 3801 aa1.32□□□□□ -2.2
MACF1-201ENST00000289893 PCLOQ9Y6V0 5065 aa1.32□□□□□ -2.2
MACF1-201ENST00000289893 KRTAP19-2Q3LHN2 52 aa1.32□□□□□ -2.2
MACF1-201ENST00000289893 KMT2CQ8NEZ4 4911 aaKnown RBP1.32□□□□□ -2.2
MACF1-201ENST00000289893 KRTAP12-4P60329 112 aa1.31□□□□□ -2.2
MACF1-201ENST00000289893 SPRR5A0A1B0GTR4 108 aa1.31□□□□□ -2.2
MACF1-201ENST00000289893 FLGP20930 4061 aaPredicted RBP1.31□□□□□ -2.2
MACF1-201ENST00000289893 HMCN2Q8NDA2 5059 aa1.31□□□□□ -2.2
MACF1-201ENST00000289893 KRTAP9-8Q9BYQ0 159 aa1.3□□□□□ -2.2
MACF1-201ENST00000289893 RNF213Q63HN8 5207 aa1.29□□□□□ -2.2
MACF1-201ENST00000289893 LPAP08519 4548 aa1.29□□□□□ -2.2
MACF1-201ENST00000289893 MT1FP04733 61 aa1.29□□□□□ -2.2
MACF1-201ENST00000289893 KRTAP9-3Q9BYQ3 159 aa1.28□□□□□ -2.2
MACF1-201ENST00000289893 KRTAP19-1Q8IUB9 90 aa1.28□□□□□ -2.2
MACF1-201ENST00000289893 SPRR2EP22531 72 aa1.27□□□□□ -2.21
MACF1-201ENST00000289893 SPRR2BP35325 72 aa1.27□□□□□ -2.21
MACF1-201ENST00000289893 SPRR2AP35326 72 aa1.27□□□□□ -2.21
MACF1-201ENST00000289893 KRTAP17-1Q9BYP8 105 aa1.26□□□□□ -2.21
MACF1-201ENST00000289893 UBR4Q5T4S7 5183 aa1.25□□□□□ -2.21
MACF1-201ENST00000289893 MT1BP07438 61 aa1.24□□□□□ -2.21
MACF1-201ENST00000289893 MT1GP13640 62 aa1.24□□□□□ -2.21
MACF1-201ENST00000289893 SPRR2DP22532 72 aa1.22□□□□□ -2.21
MACF1-201ENST00000289893 FAT4Q6V0I7 4981 aa1.22□□□□□ -2.21
MACF1-201ENST00000289893 MT1XP80297 61 aa1.22□□□□□ -2.21
MACF1-201ENST00000289893 KRTAP19-6Q3LI70 58 aa1.2□□□□□ -2.22
MACF1-201ENST00000289893 LCE3DQ9BYE3 92 aa1.19□□□□□ -2.22
MACF1-201ENST00000289893 LCE3EQ5T5B0 92 aa1.19□□□□□ -2.22
MACF1-201ENST00000289893 KRTAP4-8A0A0G2JLE6 195 aa1.16□□□□□ -2.22
MACF1-201ENST00000289893 KRTAP4-8Q9BYQ9 185 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms