RNA–Protein interactions for RNA: ENST00000287844.6

ABCF2-202, Transcript of ATP binding cassette subfamily F member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCF2, Length 3,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF2-202ENST00000287844 DNAH6Q9C0G6 4158 aa4.62□□□□□ -1.67
ABCF2-202ENST00000287844 KMT2CQ8NEZ4 4911 aaKnown RBP4.62□□□□□ -1.67
ABCF2-202ENST00000287844 KRTAP13-4Q3LI77 160 aa4.6□□□□□ -1.67
ABCF2-202ENST00000287844 KRTAP21-3Q3LHN1 58 aa4.59□□□□□ -1.67
ABCF2-202ENST00000287844 DNAH5Q8TE73 4624 aa4.58□□□□□ -1.68
ABCF2-202ENST00000287844 DNAH11Q96DT5 4516 aa4.57□□□□□ -1.68
ABCF2-202ENST00000287844 KRTAP10-6P60371 365 aaPredicted RBP4.56□□□□□ -1.68
ABCF2-202ENST00000287844 S4R3F8 94 aa4.55□□□□□ -1.68
ABCF2-202ENST00000287844 PKD1P98161 4303 aa4.54□□□□□ -1.68
ABCF2-202ENST00000287844 FAT2Q9NYQ8 4349 aa4.52□□□□□ -1.69
ABCF2-202ENST00000287844 HYDINQ4G0P3 5121 aa4.51□□□□□ -1.69
ABCF2-202ENST00000287844 KRTAP12-2P59991 146 aa4.5□□□□□ -1.69
ABCF2-202ENST00000287844 LRP1BQ9NZR2 4599 aa4.5□□□□□ -1.69
ABCF2-202ENST00000287844 XP32Q5T750 250 aa4.5□□□□□ -1.69
ABCF2-202ENST00000287844 MYCBP2O75592 4640 aa4.49□□□□□ -1.69
ABCF2-202ENST00000287844 KRTAP1-4P0C5Y4 121 aa4.46□□□□□ -1.69
ABCF2-202ENST00000287844 VPS13BQ7Z7G8 4022 aa4.45□□□□□ -1.7
ABCF2-202ENST00000287844 PLAC4Q8WY50 150 aa4.44□□□□□ -1.7
ABCF2-202ENST00000287844 PKHD1P08F94 4074 aa4.43□□□□□ -1.7
ABCF2-202ENST00000287844 RYR3Q15413 4870 aa4.43□□□□□ -1.7
ABCF2-202ENST00000287844 KRTAP12-1P59990 96 aa4.43□□□□□ -1.7
ABCF2-202ENST00000287844 FAT1Q14517 4588 aa4.42□□□□□ -1.7
ABCF2-202ENST00000287844 SACSQ9NZJ4 4579 aa4.41□□□□□ -1.7
ABCF2-202ENST00000287844 KIAA1109Q2LD37 5005 aa4.36□□□□□ -1.71
ABCF2-202ENST00000287844 RPS29P62273 56 aaKnown RBP4.36□□□□□ -1.71
ABCF2-202ENST00000287844 EPPK1P58107 5090 aaKnown RBP4.33□□□□□ -1.72
ABCF2-202ENST00000287844 FAT3Q8TDW7 4589 aa4.33□□□□□ -1.72
ABCF2-202ENST00000287844 DYNC1H1Q14204 4646 aaKnown RBP4.31□□□□□ -1.72
ABCF2-202ENST00000287844 RYR2Q92736 4967 aa4.3□□□□□ -1.72
ABCF2-202ENST00000287844 M0QZ58 72 aa4.29□□□□□ -1.72
ABCF2-202ENST00000287844 KRTAP10-8P60410 259 aa4.28□□□□□ -1.73
ABCF2-202ENST00000287844 APOBP04114 4563 aaKnown RBP4.27□□□□□ -1.73
ABCF2-202ENST00000287844 PKHD1L1Q86WI1 4243 aa4.26□□□□□ -1.73
ABCF2-202ENST00000287844 R4GN34 69 aa4.25□□□□□ -1.73
ABCF2-202ENST00000287844 LRP1Q07954 4544 aaKnown RBP4.22□□□□□ -1.73
ABCF2-202ENST00000287844 A0A1B0GVY2 172 aa4.2□□□□□ -1.74
ABCF2-202ENST00000287844 KRTAP10-4P60372 401 aaPredicted RBP4.2□□□□□ -1.74
ABCF2-202ENST00000287844 RYR1P21817 5038 aa4.19□□□□□ -1.74
ABCF2-202ENST00000287844 Q5VSD8 79 aa4.17□□□□□ -1.74
ABCF2-202ENST00000287844 KRTAP4-5Q9BYR2 181 aa4.15□□□□□ -1.75
ABCF2-202ENST00000287844 PP632Q6XCG6 107 aa4.13□□□□□ -1.75
ABCF2-202ENST00000287844 PRO2289Q9P1D8 64 aa4.13□□□□□ -1.75
ABCF2-202ENST00000287844 TNXBP22105 4242 aa4.12□□□□□ -1.75
ABCF2-202ENST00000287844 KRTAP17-1Q9BYP8 105 aa4.12□□□□□ -1.75
ABCF2-202ENST00000287844 HSPG2P98160 4391 aa4.1□□□□□ -1.75
ABCF2-202ENST00000287844 HERC2O95714 4834 aa4.1□□□□□ -1.75
ABCF2-202ENST00000287844 HERC1Q15751 4861 aa4.06□□□□□ -1.76
ABCF2-202ENST00000287844 LRP2P98164 4655 aa4.06□□□□□ -1.76
ABCF2-202ENST00000287844 ABCA13Q86UQ4 5058 aa4.05□□□□□ -1.76
ABCF2-202ENST00000287844 PCLOQ9Y6V0 5065 aa4.02□□□□□ -1.77
ABCF2-202ENST00000287844 SPRR5A0A1B0GTR4 108 aa4.01□□□□□ -1.77
ABCF2-202ENST00000287844 LPAP08519 4548 aa4□□□□□ -1.77
ABCF2-202ENST00000287844 BIRC6Q9NR09 4857 aa3.98□□□□□ -1.77
ABCF2-202ENST00000287844 INE1O15225 51 aa3.95□□□□□ -1.78
ABCF2-202ENST00000287844 MUC2Q02817 5179 aa3.94□□□□□ -1.78
ABCF2-202ENST00000287844 RNF213Q63HN8 5207 aa3.93□□□□□ -1.78
ABCF2-202ENST00000287844 M0R2T5 61 aa3.92□□□□□ -1.78
ABCF2-202ENST00000287844 MT1HL1P0DM35 61 aa3.91□□□□□ -1.78
ABCF2-202ENST00000287844 UBR4Q5T4S7 5183 aa3.88□□□□□ -1.79
ABCF2-202ENST00000287844 LCE5AQ5TCM9 118 aa3.86□□□□□ -1.79
ABCF2-202ENST00000287844 KRTAP9-4Q9BYQ2 154 aa3.84□□□□□ -1.8
ABCF2-202ENST00000287844 TNP1P09430 55 aa3.83□□□□□ -1.8
ABCF2-202ENST00000287844 KRTAP19-4Q3LI73 84 aa3.81□□□□□ -1.8
ABCF2-202ENST00000287844 LCE4AQ5TA78 99 aa3.75□□□□□ -1.81
ABCF2-202ENST00000287844 FAT4Q6V0I7 4981 aa3.74□□□□□ -1.81
ABCF2-202ENST00000287844 MUC17Q685J3 4493 aa3.73□□□□□ -1.81
ABCF2-202ENST00000287844 KRTAP9-9Q9BYP9 154 aa3.71□□□□□ -1.82
ABCF2-202ENST00000287844 KRTAP4-1Q9BYQ7 146 aa3.69□□□□□ -1.82
ABCF2-202ENST00000287844 KRTAP9-6A0A140TA67 174 aa3.69□□□□□ -1.82
ABCF2-202ENST00000287844 KRTAP9-7A8MTY7 169 aa3.69□□□□□ -1.82
ABCF2-202ENST00000287844 OBSCNQ5VST9 7968 aa3.66□□□□□ -1.82
ABCF2-202ENST00000287844 HMCN2Q8NDA2 5059 aa3.65□□□□□ -1.82
ABCF2-202ENST00000287844 FSIP2Q5CZC0 6907 aa3.64□□□□□ -1.83
ABCF2-202ENST00000287844 KRTAP10-10P60014 251 aa3.6□□□□□ -1.83
ABCF2-202ENST00000287844 KRTAP19-2Q3LHN2 52 aa3.59□□□□□ -1.84
ABCF2-202ENST00000287844 LCE3AQ5TA76 89 aa3.57□□□□□ -1.84
ABCF2-202ENST00000287844 LCE1FQ5T754 118 aa3.54□□□□□ -1.84
ABCF2-202ENST00000287844 FLGP20930 4061 aaPredicted RBP3.52□□□□□ -1.85
ABCF2-202ENST00000287844 KRTAP8-1Q8IUC2 63 aa3.45□□□□□ -1.86
ABCF2-202ENST00000287844 KMT2DO14686 5537 aa3.43□□□□□ -1.86
ABCF2-202ENST00000287844 USH2AO75445 5202 aa3.42□□□□□ -1.86
ABCF2-202ENST00000287844 KRTAP10-12P60413 245 aa3.41□□□□□ -1.86
ABCF2-202ENST00000287844 SYNE1Q8NF91 8797 aaKnown RBP3.41□□□□□ -1.86
ABCF2-202ENST00000287844 LCE3CQ5T5A8 94 aa3.39□□□□□ -1.87
ABCF2-202ENST00000287844 KRTAP2-2Q9BYT5 123 aa3.38□□□□□ -1.87
ABCF2-202ENST00000287844 KRTAP12-3P60328 96 aa3.37□□□□□ -1.87
ABCF2-202ENST00000287844 DSTQ03001 7570 aaKnown RBP3.34□□□□□ -1.87
ABCF2-202ENST00000287844 KRTAP9-3Q9BYQ3 159 aa3.33□□□□□ -1.88
ABCF2-202ENST00000287844 CRCT1Q9UGL9 99 aa3.33□□□□□ -1.88
ABCF2-202ENST00000287844 LCE1AQ5T7P2 110 aa3.32□□□□□ -1.88
ABCF2-202ENST00000287844 SPRR2GQ9BYE4 73 aa3.32□□□□□ -1.88
ABCF2-202ENST00000287844 KRTAP19-1Q8IUB9 90 aa3.31□□□□□ -1.88
ABCF2-202ENST00000287844 KRTAP10-5P60370 271 aa3.27□□□□□ -1.89
ABCF2-202ENST00000287844 FCGBPQ9Y6R7 5405 aaPredicted RBP3.27□□□□□ -1.89
ABCF2-202ENST00000287844 MT1HP80294 61 aa3.26□□□□□ -1.89
ABCF2-202ENST00000287844 MT1FP04733 61 aa3.25□□□□□ -1.89
ABCF2-202ENST00000287844 KRTAP10-7P60409 375 aaPredicted RBP3.22□□□□□ -1.89
ABCF2-202ENST00000287844 MT2AP02795 61 aa3.2□□□□□ -1.9
ABCF2-202ENST00000287844 KRTAP9-8Q9BYQ0 159 aa3.2□□□□□ -1.9
ABCF2-202ENST00000287844 KRTAP2-3P0C7H8 128 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms