RNA–Protein interactions for RNA: ENST00000277549.9

CACNA1B-201, Transcript of calcium voltage-gated channel subunit alpha1 B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1B, Length 7,158 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1B-201ENST00000277549 SPRR2FQ96RM1 72 aa8.38□□□□□ -1.07
CACNA1B-201ENST00000277549 KRTAP10-4P60372 401 aaPredicted RBP8.32□□□□□ -1.08
CACNA1B-201ENST00000277549 BSNQ9UPA5 3926 aa8.3□□□□□ -1.08
CACNA1B-201ENST00000277549 AKAP9Q99996 3911 aa8.26□□□□□ -1.09
CACNA1B-201ENST00000277549 KRTAP10-7P60409 375 aaPredicted RBP8.18□□□□□ -1.1
CACNA1B-201ENST00000277549 MT1HP80294 61 aa8.16□□□□□ -1.1
CACNA1B-201ENST00000277549 OTOGQ6ZRI0 2925 aa8.16□□□□□ -1.1
CACNA1B-201ENST00000277549 KRTAP4-1Q9BYQ7 146 aa8.08□□□□□ -1.12
CACNA1B-201ENST00000277549 SPRR2EP22531 72 aa8.04□□□□□ -1.12
CACNA1B-201ENST00000277549 SPRR2BP35325 72 aa8.04□□□□□ -1.12
CACNA1B-201ENST00000277549 SPRR2AP35326 72 aa8.04□□□□□ -1.12
CACNA1B-201ENST00000277549 KRTAP19-5Q3LI72 72 aa7.98□□□□□ -1.13
CACNA1B-201ENST00000277549 KRTAP23-1A1A580 65 aa7.96□□□□□ -1.13
CACNA1B-201ENST00000277549 MT2AP02795 61 aa7.9□□□□□ -1.14
CACNA1B-201ENST00000277549 DNAH9Q9NYC9 4486 aa7.85□□□□□ -1.15
CACNA1B-201ENST00000277549 DNAH1Q9P2D7 4330 aa7.79□□□□□ -1.16
CACNA1B-201ENST00000277549 MT1FP04733 61 aa7.79□□□□□ -1.16
CACNA1B-201ENST00000277549 LCE3BQ5TA77 95 aa7.74□□□□□ -1.17
CACNA1B-201ENST00000277549 ZNF469Q96JG9 3925 aaPredicted RBP7.74□□□□□ -1.17
CACNA1B-201ENST00000277549 SPRR2DP22532 72 aa7.73□□□□□ -1.17
CACNA1B-201ENST00000277549 DNAH2Q9P225 4427 aa7.71□□□□□ -1.17
CACNA1B-201ENST00000277549 LCE3CQ5T5A8 94 aa7.66□□□□□ -1.18
CACNA1B-201ENST00000277549 DNAH5Q8TE73 4624 aa7.62□□□□□ -1.19
CACNA1B-201ENST00000277549 DNAH10Q8IVF4 4471 aa7.58□□□□□ -1.2
CACNA1B-201ENST00000277549 ANK2Q01484 3957 aa7.56□□□□□ -1.2
CACNA1B-201ENST00000277549 FRAS1Q86XX4 4008 aa7.56□□□□□ -1.2
CACNA1B-201ENST00000277549 SPRR2GQ9BYE4 73 aa7.53□□□□□ -1.2
CACNA1B-201ENST00000277549 MT1GP13640 62 aa7.5□□□□□ -1.21
CACNA1B-201ENST00000277549 VPS13BQ7Z7G8 4022 aa7.49□□□□□ -1.21
CACNA1B-201ENST00000277549 FAT2Q9NYQ8 4349 aa7.48□□□□□ -1.21
CACNA1B-201ENST00000277549 DNAH3Q8TD57 4116 aa7.46□□□□□ -1.21
CACNA1B-201ENST00000277549 LCE2BO14633 110 aa7.45□□□□□ -1.22
CACNA1B-201ENST00000277549 KMT2AQ03164 3969 aa7.42□□□□□ -1.22
CACNA1B-201ENST00000277549 DNAH8Q96JB1 4490 aa7.4□□□□□ -1.22
CACNA1B-201ENST00000277549 PLECQ15149 4684 aaKnown RBP7.34□□□□□ -1.23
CACNA1B-201ENST00000277549 DNAH17Q9UFH2 4485 aa7.31□□□□□ -1.24
CACNA1B-201ENST00000277549 SPRR5A0A1B0GTR4 108 aa7.31□□□□□ -1.24
CACNA1B-201ENST00000277549 DNAH11Q96DT5 4516 aa7.31□□□□□ -1.24
CACNA1B-201ENST00000277549 DNAH7Q8WXX0 4024 aa7.25□□□□□ -1.25
CACNA1B-201ENST00000277549 KRTAP12-4P60329 112 aa7.25□□□□□ -1.25
CACNA1B-201ENST00000277549 PRKDCP78527 4128 aaKnown RBP7.22□□□□□ -1.25
CACNA1B-201ENST00000277549 LRP1BQ9NZR2 4599 aa7.22□□□□□ -1.25
CACNA1B-201ENST00000277549 FAT1Q14517 4588 aa7.21□□□□□ -1.25
CACNA1B-201ENST00000277549 MT4P47944 62 aa7.2□□□□□ -1.26
CACNA1B-201ENST00000277549 LYSTQ99698 3801 aa7.17□□□□□ -1.26
CACNA1B-201ENST00000277549 KRTAP4-8A0A0G2JLE6 195 aa7.16□□□□□ -1.26
CACNA1B-201ENST00000277549 KRTAP4-8Q9BYQ9 185 aa7.16□□□□□ -1.26
CACNA1B-201ENST00000277549 STARD9Q9P2P6 4700 aa7.16□□□□□ -1.26
CACNA1B-201ENST00000277549 KRTAP17-1Q9BYP8 105 aa7.14□□□□□ -1.27
CACNA1B-201ENST00000277549 LCE2CQ5TA81 110 aa7.13□□□□□ -1.27
CACNA1B-201ENST00000277549 CMYA5Q8N3K9 4069 aa7.13□□□□□ -1.27
CACNA1B-201ENST00000277549 SACSQ9NZJ4 4579 aa7.1□□□□□ -1.27
CACNA1B-201ENST00000277549 KRTAP19-1Q8IUB9 90 aa7.1□□□□□ -1.27
CACNA1B-201ENST00000277549 LCE2DQ5TA82 110 aaPredicted RBP7.09□□□□□ -1.27
CACNA1B-201ENST00000277549 VPS13DQ5THJ4 4388 aa7.08□□□□□ -1.28
CACNA1B-201ENST00000277549 DYNC2H1Q8NCM8 4307 aaKnown RBP7.07□□□□□ -1.28
CACNA1B-201ENST00000277549 DYNC1H1Q14204 4646 aaKnown RBP7.04□□□□□ -1.28
CACNA1B-201ENST00000277549 DNAH6Q9C0G6 4158 aa7.01□□□□□ -1.29
CACNA1B-201ENST00000277549 MT1XP80297 61 aa6.96□□□□□ -1.29
CACNA1B-201ENST00000277549 LCE3DQ9BYE3 92 aa6.91□□□□□ -1.3
CACNA1B-201ENST00000277549 RYR1P21817 5038 aa6.89□□□□□ -1.31
CACNA1B-201ENST00000277549 APOBP04114 4563 aaKnown RBP6.87□□□□□ -1.31
CACNA1B-201ENST00000277549 LPAP08519 4548 aa6.84□□□□□ -1.31
CACNA1B-201ENST00000277549 KRTAP19-4Q3LI73 84 aa6.82□□□□□ -1.32
CACNA1B-201ENST00000277549 LCE1BQ5T7P3 118 aa6.81□□□□□ -1.32
CACNA1B-201ENST00000277549 KRTAP4-7Q9BYR0 210 aa6.81□□□□□ -1.32
CACNA1B-201ENST00000277549 KRTAP19-8Q3LI54 63 aa6.78□□□□□ -1.32
CACNA1B-201ENST00000277549 FAT3Q8TDW7 4589 aa6.78□□□□□ -1.32
CACNA1B-201ENST00000277549 MT1BP07438 61 aa6.77□□□□□ -1.33
CACNA1B-201ENST00000277549 DNHD1Q96M86 4753 aa6.77□□□□□ -1.33
CACNA1B-201ENST00000277549 LCE3EQ5T5B0 92 aa6.75□□□□□ -1.33
CACNA1B-201ENST00000277549 KRTAP9-8Q9BYQ0 159 aa6.69□□□□□ -1.34
CACNA1B-201ENST00000277549 LCE1DQ5T752 114 aa6.68□□□□□ -1.34
CACNA1B-201ENST00000277549 KRTAP9-2Q9BYQ4 174 aa6.65□□□□□ -1.35
CACNA1B-201ENST00000277549 RYR3Q15413 4870 aa6.6□□□□□ -1.35
CACNA1B-201ENST00000277549 PKHD1L1Q86WI1 4243 aa6.59□□□□□ -1.35
CACNA1B-201ENST00000277549 KRTAP9-3Q9BYQ3 159 aa6.57□□□□□ -1.36
CACNA1B-201ENST00000277549 KRTAP19-3Q7Z4W3 81 aa6.56□□□□□ -1.36
CACNA1B-201ENST00000277549 LOC100996750A0A140TA64 210 aa6.56□□□□□ -1.36
CACNA1B-201ENST00000277549 PKD1P98161 4303 aa6.56□□□□□ -1.36
CACNA1B-201ENST00000277549 LRP1Q07954 4544 aaKnown RBP6.55□□□□□ -1.36
CACNA1B-201ENST00000277549 HECTD4Q9Y4D8 3996 aa6.53□□□□□ -1.36
CACNA1B-201ENST00000277549 HSPG2P98160 4391 aa6.53□□□□□ -1.36
CACNA1B-201ENST00000277549 PKHD1P08F94 4074 aa6.48□□□□□ -1.37
CACNA1B-201ENST00000277549 KRTAP4-3Q9BYR4 195 aa6.45□□□□□ -1.38
CACNA1B-201ENST00000277549 PRM1P04553 51 aa6.43□□□□□ -1.38
CACNA1B-201ENST00000277549 LCE5AQ5TCM9 118 aa6.43□□□□□ -1.38
CACNA1B-201ENST00000277549 MT1LQ93083 61 aa6.37□□□□□ -1.39
CACNA1B-201ENST00000277549 MYCBP2O75592 4640 aa6.36□□□□□ -1.39
CACNA1B-201ENST00000277549 KRTAP9-6A0A140TA67 174 aa6.34□□□□□ -1.39
CACNA1B-201ENST00000277549 MT3P25713 68 aa6.31□□□□□ -1.4
CACNA1B-201ENST00000277549 MT1EP04732 61 aa6.3□□□□□ -1.4
CACNA1B-201ENST00000277549 KRTAP19-6Q3LI70 58 aa6.28□□□□□ -1.4
CACNA1B-201ENST00000277549 KRTAP20-1Q3LI63 56 aa6.27□□□□□ -1.41
CACNA1B-201ENST00000277549 TNXBP22105 4242 aa6.24□□□□□ -1.41
CACNA1B-201ENST00000277549 MT1MQ8N339 61 aa6.22□□□□□ -1.41
CACNA1B-201ENST00000277549 KRTAP4-9Q9BYQ8 210 aa6.21□□□□□ -1.42
CACNA1B-201ENST00000277549 HERC1Q15751 4861 aa6.17□□□□□ -1.42
CACNA1B-201ENST00000277549 SYNE2Q8WXH0 6885 aaKnown RBP6.15□□□□□ -1.43
CACNA1B-201ENST00000277549 LCE1CQ5T751 118 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms