RNA–Protein interactions for RNA: ENST00000273853.10

CENPC-201, Transcript of centromere protein C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CENPC, Length 6,940 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPC-201ENST00000273853 TRRAPQ9Y4A5 3859 aa4.26□□□□□ -1.73
CENPC-201ENST00000273853 LORP23490 312 aaPredicted RBP4.26□□□□□ -1.73
CENPC-201ENST00000273853 KRTAP8-1Q8IUC2 63 aa4.18□□□□□ -1.74
CENPC-201ENST00000273853 DNAH5Q8TE73 4624 aa4.15□□□□□ -1.75
CENPC-201ENST00000273853 AKAP9Q99996 3911 aa4.12□□□□□ -1.75
CENPC-201ENST00000273853 DNAH10Q8IVF4 4471 aa4.12□□□□□ -1.75
CENPC-201ENST00000273853 DNAH9Q9NYC9 4486 aa4.12□□□□□ -1.75
CENPC-201ENST00000273853 DNAH11Q96DT5 4516 aa4.11□□□□□ -1.75
CENPC-201ENST00000273853 MT1HP80294 61 aa4.11□□□□□ -1.75
CENPC-201ENST00000273853 DNAH1Q9P2D7 4330 aa4.09□□□□□ -1.75
CENPC-201ENST00000273853 BSNQ9UPA5 3926 aa4.08□□□□□ -1.76
CENPC-201ENST00000273853 KRTAP4-1Q9BYQ7 146 aa4.08□□□□□ -1.76
CENPC-201ENST00000273853 PLECQ15149 4684 aaKnown RBP4.07□□□□□ -1.76
CENPC-201ENST00000273853 DNAH2Q9P225 4427 aa4.06□□□□□ -1.76
CENPC-201ENST00000273853 SPRR2GQ9BYE4 73 aa4.06□□□□□ -1.76
CENPC-201ENST00000273853 MT2AP02795 61 aa4.05□□□□□ -1.76
CENPC-201ENST00000273853 KRTAP19-4Q3LI73 84 aa3.95□□□□□ -1.78
CENPC-201ENST00000273853 DNAH17Q9UFH2 4485 aa3.95□□□□□ -1.78
CENPC-201ENST00000273853 DYNC1H1Q14204 4646 aaKnown RBP3.94□□□□□ -1.78
CENPC-201ENST00000273853 VPS13DQ5THJ4 4388 aa3.94□□□□□ -1.78
CENPC-201ENST00000273853 MT1FP04733 61 aa3.94□□□□□ -1.78
CENPC-201ENST00000273853 FRAS1Q86XX4 4008 aa3.94□□□□□ -1.78
CENPC-201ENST00000273853 DNHD1Q96M86 4753 aa3.91□□□□□ -1.78
CENPC-201ENST00000273853 KRTAP10-7P60409 375 aaPredicted RBP3.88□□□□□ -1.79
CENPC-201ENST00000273853 SPRR2FQ96RM1 72 aa3.86□□□□□ -1.79
CENPC-201ENST00000273853 LRP1BQ9NZR2 4599 aa3.85□□□□□ -1.79
CENPC-201ENST00000273853 FAT1Q14517 4588 aa3.84□□□□□ -1.79
CENPC-201ENST00000273853 SACSQ9NZJ4 4579 aa3.84□□□□□ -1.8
CENPC-201ENST00000273853 RYR1P21817 5038 aa3.83□□□□□ -1.8
CENPC-201ENST00000273853 KRTAP19-5Q3LI72 72 aa3.82□□□□□ -1.8
CENPC-201ENST00000273853 DYNC2H1Q8NCM8 4307 aaKnown RBP3.82□□□□□ -1.8
CENPC-201ENST00000273853 FAT2Q9NYQ8 4349 aa3.82□□□□□ -1.8
CENPC-201ENST00000273853 KRTAP19-8Q3LI54 63 aa3.79□□□□□ -1.8
CENPC-201ENST00000273853 LCE3BQ5TA77 95 aa3.79□□□□□ -1.8
CENPC-201ENST00000273853 LCE3CQ5T5A8 94 aa3.78□□□□□ -1.8
CENPC-201ENST00000273853 ZNF469Q96JG9 3925 aaPredicted RBP3.77□□□□□ -1.81
CENPC-201ENST00000273853 ANK2Q01484 3957 aa3.76□□□□□ -1.81
CENPC-201ENST00000273853 DNAH3Q8TD57 4116 aa3.74□□□□□ -1.81
CENPC-201ENST00000273853 STARD9Q9P2P6 4700 aa3.74□□□□□ -1.81
CENPC-201ENST00000273853 DNAH8Q96JB1 4490 aa3.71□□□□□ -1.82
CENPC-201ENST00000273853 RYR3Q15413 4870 aa3.71□□□□□ -1.82
CENPC-201ENST00000273853 KRTAP19-1Q8IUB9 90 aa3.7□□□□□ -1.82
CENPC-201ENST00000273853 APOBP04114 4563 aaKnown RBP3.7□□□□□ -1.82
CENPC-201ENST00000273853 HERC1Q15751 4861 aa3.69□□□□□ -1.82
CENPC-201ENST00000273853 RYR2Q92736 4967 aa3.65□□□□□ -1.82
CENPC-201ENST00000273853 LRP1Q07954 4544 aaKnown RBP3.65□□□□□ -1.82
CENPC-201ENST00000273853 SPRR2EP22531 72 aa3.65□□□□□ -1.83
CENPC-201ENST00000273853 SPRR2BP35325 72 aa3.65□□□□□ -1.83
CENPC-201ENST00000273853 SPRR2AP35326 72 aa3.65□□□□□ -1.83
CENPC-201ENST00000273853 DNAH6Q9C0G6 4158 aa3.64□□□□□ -1.83
CENPC-201ENST00000273853 CMYA5Q8N3K9 4069 aa3.63□□□□□ -1.83
CENPC-201ENST00000273853 KMT2AQ03164 3969 aa3.62□□□□□ -1.83
CENPC-201ENST00000273853 FAT3Q8TDW7 4589 aa3.62□□□□□ -1.83
CENPC-201ENST00000273853 MT1XP80297 61 aa3.61□□□□□ -1.83
CENPC-201ENST00000273853 KRTAP17-1Q9BYP8 105 aa3.6□□□□□ -1.83
CENPC-201ENST00000273853 MT1GP13640 62 aa3.6□□□□□ -1.83
CENPC-201ENST00000273853 VPS13BQ7Z7G8 4022 aa3.59□□□□□ -1.83
CENPC-201ENST00000273853 MT1BP07438 61 aa3.59□□□□□ -1.83
CENPC-201ENST00000273853 KIAA1109Q2LD37 5005 aa3.59□□□□□ -1.83
CENPC-201ENST00000273853 LYSTQ99698 3801 aa3.59□□□□□ -1.84
CENPC-201ENST00000273853 PRKDCP78527 4128 aaKnown RBP3.58□□□□□ -1.84
CENPC-201ENST00000273853 HSPG2P98160 4391 aa3.58□□□□□ -1.84
CENPC-201ENST00000273853 KRTAP9-8Q9BYQ0 159 aa3.58□□□□□ -1.84
CENPC-201ENST00000273853 SPRR2DP22532 72 aa3.54□□□□□ -1.84
CENPC-201ENST00000273853 KRTAP12-4P60329 112 aa3.54□□□□□ -1.84
CENPC-201ENST00000273853 LCE2BO14633 110 aa3.53□□□□□ -1.84
CENPC-201ENST00000273853 DNAH7Q8WXX0 4024 aa3.53□□□□□ -1.84
CENPC-201ENST00000273853 KRTAP9-3Q9BYQ3 159 aa3.52□□□□□ -1.85
CENPC-201ENST00000273853 BIRC6Q9NR09 4857 aa3.52□□□□□ -1.85
CENPC-201ENST00000273853 LCE2CQ5TA81 110 aa3.51□□□□□ -1.85
CENPC-201ENST00000273853 MYCBP2O75592 4640 aa3.48□□□□□ -1.85
CENPC-201ENST00000273853 HERC2O95714 4834 aa3.44□□□□□ -1.86
CENPC-201ENST00000273853 PKD1P98161 4303 aa3.43□□□□□ -1.86
CENPC-201ENST00000273853 PCLOQ9Y6V0 5065 aa3.4□□□□□ -1.86
CENPC-201ENST00000273853 KRTAP4-8A0A0G2JLE6 195 aa3.39□□□□□ -1.87
CENPC-201ENST00000273853 KRTAP4-8Q9BYQ9 185 aa3.39□□□□□ -1.87
CENPC-201ENST00000273853 SPRR5A0A1B0GTR4 108 aa3.39□□□□□ -1.87
CENPC-201ENST00000273853 PKHD1L1Q86WI1 4243 aa3.39□□□□□ -1.87
CENPC-201ENST00000273853 KRTAP19-3Q7Z4W3 81 aa3.37□□□□□ -1.87
CENPC-201ENST00000273853 KRTAP19-2Q3LHN2 52 aa3.33□□□□□ -1.88
CENPC-201ENST00000273853 LCE3DQ9BYE3 92 aa3.33□□□□□ -1.88
CENPC-201ENST00000273853 LCE3EQ5T5B0 92 aa3.31□□□□□ -1.88
CENPC-201ENST00000273853 MT1LQ93083 61 aa3.31□□□□□ -1.88
CENPC-201ENST00000273853 MT4P47944 62 aa3.31□□□□□ -1.88
CENPC-201ENST00000273853 KRTAP4-7Q9BYR0 210 aa3.31□□□□□ -1.88
CENPC-201ENST00000273853 HECTD4Q9Y4D8 3996 aa3.31□□□□□ -1.88
CENPC-201ENST00000273853 MT1EP04732 61 aa3.29□□□□□ -1.88
CENPC-201ENST00000273853 KRTAP19-6Q3LI70 58 aa3.27□□□□□ -1.89
CENPC-201ENST00000273853 LCE1BQ5T7P3 118 aa3.25□□□□□ -1.89
CENPC-201ENST00000273853 LPAP08519 4548 aa3.25□□□□□ -1.89
CENPC-201ENST00000273853 PRM1P04553 51 aa3.25□□□□□ -1.89
CENPC-201ENST00000273853 LRP2P98164 4655 aa3.24□□□□□ -1.89
CENPC-201ENST00000273853 LCE2DQ5TA82 110 aaPredicted RBP3.23□□□□□ -1.89
CENPC-201ENST00000273853 EPPK1P58107 5090 aaKnown RBP3.22□□□□□ -1.89
CENPC-201ENST00000273853 LOC100996750A0A140TA64 210 aa3.2□□□□□ -1.9
CENPC-201ENST00000273853 HYDINQ4G0P3 5121 aa3.19□□□□□ -1.9
CENPC-201ENST00000273853 MT1MQ8N339 61 aa3.19□□□□□ -1.9
CENPC-201ENST00000273853 KRTAP9-2Q9BYQ4 174 aa3.18□□□□□ -1.9
CENPC-201ENST00000273853 MUC17Q685J3 4493 aa3.18□□□□□ -1.9
CENPC-201ENST00000273853 MT3P25713 68 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms