RNA–Protein interactions for RNA: ENST00000273063.10

SLC4A3-201, Transcript of solute carrier family 4 member 3, humanhuman

TSL 1 (best) BASIC

Gene SLC4A3, Length 4,246 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC4A3-201ENST00000273063 LYSTQ99698 3801 aa7.89□□□□□ -1.15
SLC4A3-201ENST00000273063 MT1HL1P0DM35 61 aa7.89□□□□□ -1.15
SLC4A3-201ENST00000273063 PP632Q6XCG6 107 aa7.81□□□□□ -1.16
SLC4A3-201ENST00000273063 VPS13DQ5THJ4 4388 aa7.81□□□□□ -1.16
SLC4A3-201ENST00000273063 KMT2AQ03164 3969 aa7.8□□□□□ -1.16
SLC4A3-201ENST00000273063 KRTAP3-3Q9BYR6 98 aa7.8□□□□□ -1.16
SLC4A3-201ENST00000273063 KRTAP10-10P60014 251 aa7.78□□□□□ -1.16
SLC4A3-201ENST00000273063 KRTAP3-2Q9BYR7 98 aa7.74□□□□□ -1.17
SLC4A3-201ENST00000273063 DNAH17Q9UFH2 4485 aa7.72□□□□□ -1.17
SLC4A3-201ENST00000273063 KIAA1109Q2LD37 5005 aa7.72□□□□□ -1.17
SLC4A3-201ENST00000273063 MYCBP2O75592 4640 aa7.71□□□□□ -1.17
SLC4A3-201ENST00000273063 DNAH8Q96JB1 4490 aa7.71□□□□□ -1.18
SLC4A3-201ENST00000273063 LRP1BQ9NZR2 4599 aa7.71□□□□□ -1.18
SLC4A3-201ENST00000273063 RYR1P21817 5038 aa7.7□□□□□ -1.18
SLC4A3-201ENST00000273063 DYNC1H1Q14204 4646 aaKnown RBP7.64□□□□□ -1.19
SLC4A3-201ENST00000273063 DNAH2Q9P225 4427 aa7.63□□□□□ -1.19
SLC4A3-201ENST00000273063 FAT3Q8TDW7 4589 aa7.58□□□□□ -1.2
SLC4A3-201ENST00000273063 ALMS1Q8TCU4 4167 aa7.54□□□□□ -1.2
SLC4A3-201ENST00000273063 HYDINQ4G0P3 5121 aa7.49□□□□□ -1.21
SLC4A3-201ENST00000273063 VPS13BQ7Z7G8 4022 aa7.49□□□□□ -1.21
SLC4A3-201ENST00000273063 DNAH7Q8WXX0 4024 aa7.48□□□□□ -1.21
SLC4A3-201ENST00000273063 RYR3Q15413 4870 aa7.48□□□□□ -1.21
SLC4A3-201ENST00000273063 DNAH3Q8TD57 4116 aa7.48□□□□□ -1.21
SLC4A3-201ENST00000273063 LRP1Q07954 4544 aaKnown RBP7.45□□□□□ -1.22
SLC4A3-201ENST00000273063 SACSQ9NZJ4 4579 aa7.44□□□□□ -1.22
SLC4A3-201ENST00000273063 FRAS1Q86XX4 4008 aa7.42□□□□□ -1.22
SLC4A3-201ENST00000273063 DNAH6Q9C0G6 4158 aa7.41□□□□□ -1.22
SLC4A3-201ENST00000273063 CMYA5Q8N3K9 4069 aa7.4□□□□□ -1.22
SLC4A3-201ENST00000273063 DYNC2H1Q8NCM8 4307 aaKnown RBP7.37□□□□□ -1.23
SLC4A3-201ENST00000273063 LORP23490 312 aaPredicted RBP7.35□□□□□ -1.23
SLC4A3-201ENST00000273063 PRO2289Q9P1D8 64 aa7.34□□□□□ -1.24
SLC4A3-201ENST00000273063 APOBP04114 4563 aaKnown RBP7.33□□□□□ -1.24
SLC4A3-201ENST00000273063 FAT2Q9NYQ8 4349 aa7.29□□□□□ -1.24
SLC4A3-201ENST00000273063 PKHD1P08F94 4074 aa7.29□□□□□ -1.24
SLC4A3-201ENST00000273063 KMT2CQ8NEZ4 4911 aaKnown RBP7.26□□□□□ -1.25
SLC4A3-201ENST00000273063 KRTAP17-1Q9BYP8 105 aa7.26□□□□□ -1.25
SLC4A3-201ENST00000273063 HECTD4Q9Y4D8 3996 aa7.25□□□□□ -1.25
SLC4A3-201ENST00000273063 KRTAP15-1Q3LI76 137 aa7.21□□□□□ -1.25
SLC4A3-201ENST00000273063 KRTAP4-1Q9BYQ7 146 aa7.18□□□□□ -1.26
SLC4A3-201ENST00000273063 LRP2P98164 4655 aa7.15□□□□□ -1.26
SLC4A3-201ENST00000273063 HERC2O95714 4834 aa7.08□□□□□ -1.28
SLC4A3-201ENST00000273063 RYR2Q92736 4967 aa7.05□□□□□ -1.28
SLC4A3-201ENST00000273063 PCLOQ9Y6V0 5065 aa6.92□□□□□ -1.3
SLC4A3-201ENST00000273063 KRTAP10-12P60413 245 aa6.88□□□□□ -1.31
SLC4A3-201ENST00000273063 LCE3AQ5TA76 89 aa6.85□□□□□ -1.31
SLC4A3-201ENST00000273063 EPPK1P58107 5090 aaKnown RBP6.84□□□□□ -1.31
SLC4A3-201ENST00000273063 LPAP08519 4548 aa6.8□□□□□ -1.32
SLC4A3-201ENST00000273063 HSPG2P98160 4391 aa6.78□□□□□ -1.32
SLC4A3-201ENST00000273063 KRTAP12-3P60328 96 aa6.77□□□□□ -1.33
SLC4A3-201ENST00000273063 PKD1P98161 4303 aa6.76□□□□□ -1.33
SLC4A3-201ENST00000273063 KRTAP23-1A1A580 65 aa6.73□□□□□ -1.33
SLC4A3-201ENST00000273063 MT1HP80294 61 aa6.71□□□□□ -1.34
SLC4A3-201ENST00000273063 MT2AP02795 61 aa6.66□□□□□ -1.34
SLC4A3-201ENST00000273063 ABCA13Q86UQ4 5058 aa6.65□□□□□ -1.34
SLC4A3-201ENST00000273063 SPRR2GQ9BYE4 73 aa6.62□□□□□ -1.35
SLC4A3-201ENST00000273063 FSIP2Q5CZC0 6907 aa6.61□□□□□ -1.35
SLC4A3-201ENST00000273063 MT1FP04733 61 aa6.6□□□□□ -1.35
SLC4A3-201ENST00000273063 BIRC6Q9NR09 4857 aa6.59□□□□□ -1.36
SLC4A3-201ENST00000273063 RNF213Q63HN8 5207 aa6.58□□□□□ -1.36
SLC4A3-201ENST00000273063 MUC2Q02817 5179 aa6.55□□□□□ -1.36
SLC4A3-201ENST00000273063 HERC1Q15751 4861 aa6.53□□□□□ -1.36
SLC4A3-201ENST00000273063 CRCT1Q9UGL9 99 aa6.49□□□□□ -1.37
SLC4A3-201ENST00000273063 KRTAP19-1Q8IUB9 90 aa6.45□□□□□ -1.38
SLC4A3-201ENST00000273063 PKHD1L1Q86WI1 4243 aa6.41□□□□□ -1.38
SLC4A3-201ENST00000273063 TNXBP22105 4242 aa6.39□□□□□ -1.39
SLC4A3-201ENST00000273063 UBR4Q5T4S7 5183 aa6.38□□□□□ -1.39
SLC4A3-201ENST00000273063 FAT4Q6V0I7 4981 aa6.38□□□□□ -1.39
SLC4A3-201ENST00000273063 INE1O15225 51 aa6.37□□□□□ -1.39
SLC4A3-201ENST00000273063 KRTAP8-1Q8IUC2 63 aa6.28□□□□□ -1.4
SLC4A3-201ENST00000273063 LCE2CQ5TA81 110 aa6.28□□□□□ -1.4
SLC4A3-201ENST00000273063 KRTAP19-2Q3LHN2 52 aa6.22□□□□□ -1.41
SLC4A3-201ENST00000273063 KRTAP19-8Q3LI54 63 aa6.21□□□□□ -1.42
SLC4A3-201ENST00000273063 KRTAP9-8Q9BYQ0 159 aa6.2□□□□□ -1.42
SLC4A3-201ENST00000273063 KRTAP19-5Q3LI72 72 aa6.19□□□□□ -1.42
SLC4A3-201ENST00000273063 KRTAP10-7P60409 375 aaPredicted RBP6.19□□□□□ -1.42
SLC4A3-201ENST00000273063 MUC17Q685J3 4493 aa6.18□□□□□ -1.42
SLC4A3-201ENST00000273063 MT1BP07438 61 aa6.14□□□□□ -1.43
SLC4A3-201ENST00000273063 MT1XP80297 61 aa6.14□□□□□ -1.43
SLC4A3-201ENST00000273063 KRTAP10-5P60370 271 aa6.1□□□□□ -1.43
SLC4A3-201ENST00000273063 FLGP20930 4061 aaPredicted RBP6.06□□□□□ -1.44
SLC4A3-201ENST00000273063 OBSCNQ5VST9 7968 aa6.05□□□□□ -1.44
SLC4A3-201ENST00000273063 LCE3CQ5T5A8 94 aa6.02□□□□□ -1.45
SLC4A3-201ENST00000273063 HMCN2Q8NDA2 5059 aa5.98□□□□□ -1.45
SLC4A3-201ENST00000273063 KRTAP9-3Q9BYQ3 159 aa5.98□□□□□ -1.45
SLC4A3-201ENST00000273063 SYNE1Q8NF91 8797 aaKnown RBP5.96□□□□□ -1.46
SLC4A3-201ENST00000273063 KRTAP4-8A0A0G2JLE6 195 aa5.93□□□□□ -1.46
SLC4A3-201ENST00000273063 KRTAP4-8Q9BYQ9 185 aa5.93□□□□□ -1.46
SLC4A3-201ENST00000273063 SPRR5A0A1B0GTR4 108 aa5.91□□□□□ -1.46
SLC4A3-201ENST00000273063 SPRR2FQ96RM1 72 aa5.88□□□□□ -1.47
SLC4A3-201ENST00000273063 LCE2BO14633 110 aa5.79□□□□□ -1.48
SLC4A3-201ENST00000273063 USH2AO75445 5202 aa5.78□□□□□ -1.48
SLC4A3-201ENST00000273063 DSTQ03001 7570 aaKnown RBP5.65□□□□□ -1.51
SLC4A3-201ENST00000273063 KRTAP4-7Q9BYR0 210 aa5.63□□□□□ -1.51
SLC4A3-201ENST00000273063 KRTAP19-4Q3LI73 84 aa5.6□□□□□ -1.51
SLC4A3-201ENST00000273063 MT1GP13640 62 aa5.58□□□□□ -1.52
SLC4A3-201ENST00000273063 FCGBPQ9Y6R7 5405 aaPredicted RBP5.55□□□□□ -1.52
SLC4A3-201ENST00000273063 KMT2DO14686 5537 aa5.51□□□□□ -1.53
SLC4A3-201ENST00000273063 MT1LQ93083 61 aa5.46□□□□□ -1.54
SLC4A3-201ENST00000273063 LCE2AQ5TA79 106 aaPredicted RBP5.45□□□□□ -1.54
SLC4A3-201ENST00000273063 LCE3BQ5TA77 95 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms