RNA–Protein interactions for RNA: ENST00000269740.8

SLC39A3-201, Transcript of solute carrier family 39 member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC39A3, Length 1,502 nt, Biotype protein coding, Subcellular localisation Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A3-201ENST00000269740 CYSTM1Q9H1C7 97 aa11.49□□□□□ -0.57
SLC39A3-201ENST00000269740 ACYP2P14621 99 aa11.47□□□□□ -0.57
SLC39A3-201ENST00000269740 CSAG1Q6PB30 78 aa11.44□□□□□ -0.58
SLC39A3-201ENST00000269740 KRTAP3-3Q9BYR6 98 aa11.42□□□□□ -0.58
SLC39A3-201ENST00000269740 PCP4P48539 62 aa11.4□□□□□ -0.59
SLC39A3-201ENST00000269740 KRTAP9-8Q9BYQ0 159 aa11.35□□□□□ -0.59
SLC39A3-201ENST00000269740 MT2AP02795 61 aa11.25□□□□□ -0.61
SLC39A3-201ENST00000269740 CHKB-CPT1BH3BT56 60 aa11.24□□□□□ -0.61
SLC39A3-201ENST00000269740 ATP5EP56381 51 aaPredicted RBP11.2□□□□□ -0.62
SLC39A3-201ENST00000269740 SPTSSBQ8NFR3 76 aa11.19□□□□□ -0.62
SLC39A3-201ENST00000269740 TMEM258P61165 79 aa11.17□□□□□ -0.62
SLC39A3-201ENST00000269740 COA5Q86WW8 74 aa11.16□□□□□ -0.62
SLC39A3-201ENST00000269740 MT1FP04733 61 aa11.14□□□□□ -0.63
SLC39A3-201ENST00000269740 KRTAP10-10P60014 251 aa11.14□□□□□ -0.63
SLC39A3-201ENST00000269740 H0YAA0 97 aa11.14□□□□□ -0.63
SLC39A3-201ENST00000269740 LCE2DQ5TA82 110 aaPredicted RBP11.01□□□□□ -0.65
SLC39A3-201ENST00000269740 ADM2Q7Z4H4 148 aa10.98□□□□□ -0.65
SLC39A3-201ENST00000269740 KRTAP9-3Q9BYQ3 159 aa10.96□□□□□ -0.65
SLC39A3-201ENST00000269740 CRIPTQ9P021 101 aa10.89□□□□□ -0.67
SLC39A3-201ENST00000269740 KRTAP9-2Q9BYQ4 174 aa10.87□□□□□ -0.67
SLC39A3-201ENST00000269740 KRTAP3-2Q9BYR7 98 aa10.86□□□□□ -0.67
SLC39A3-201ENST00000269740 P0C880 135 aa10.82□□□□□ -0.68
SLC39A3-201ENST00000269740 SERP1Q9Y6X1 66 aa10.81□□□□□ -0.68
SLC39A3-201ENST00000269740 SPRR2GQ9BYE4 73 aa10.76□□□□□ -0.69
SLC39A3-201ENST00000269740 KRTAP19-1Q8IUB9 90 aa10.75□□□□□ -0.69
SLC39A3-201ENST00000269740 LCE2BO14633 110 aa10.74□□□□□ -0.69
SLC39A3-201ENST00000269740 SEC61GP60059 68 aa10.74□□□□□ -0.69
SLC39A3-201ENST00000269740 R4GN34 69 aa10.67□□□□□ -0.7
SLC39A3-201ENST00000269740 A0A1B0GU69 56 aa10.6□□□□□ -0.71
SLC39A3-201ENST00000269740 M0QZ58 72 aa10.59□□□□□ -0.71
SLC39A3-201ENST00000269740 USH2AO75445 5202 aa10.58□□□□□ -0.72
SLC39A3-201ENST00000269740 KRTAP19-8Q3LI54 63 aa10.57□□□□□ -0.72
SLC39A3-201ENST00000269740 LINC01558Q9Y6Z2 57 aa10.57□□□□□ -0.72
SLC39A3-201ENST00000269740 RPS28P62857 69 aaKnown RBP10.55□□□□□ -0.72
SLC39A3-201ENST00000269740 SVIPQ8NHG7 77 aa10.54□□□□□ -0.72
SLC39A3-201ENST00000269740 PRR15LQ9BU68 103 aa10.51□□□□□ -0.73
SLC39A3-201ENST00000269740 FSIP2Q5CZC0 6907 aa10.5□□□□□ -0.73
SLC39A3-201ENST00000269740 Q5VV11 94 aa10.49□□□□□ -0.73
SLC39A3-201ENST00000269740 A0A1B0GU33 70 aa10.48□□□□□ -0.73
SLC39A3-201ENST00000269740 SMIM26A0A096LP01 95 aa10.45□□□□□ -0.74
SLC39A3-201ENST00000269740 V9GYY9 64 aa10.44□□□□□ -0.74
SLC39A3-201ENST00000269740 MT1BP07438 61 aa10.43□□□□□ -0.74
SLC39A3-201ENST00000269740 CRCT1Q9UGL9 99 aa10.4□□□□□ -0.74
SLC39A3-201ENST00000269740 Q1T7F1 81 aa10.39□□□□□ -0.75
SLC39A3-201ENST00000269740 KRTAP13-4Q3LI77 160 aa10.39□□□□□ -0.75
SLC39A3-201ENST00000269740 LINC01554Q52M75 96 aa10.38□□□□□ -0.75
SLC39A3-201ENST00000269740 SSPOA2VEC9 5147 aa10.3□□□□□ -0.76
SLC39A3-201ENST00000269740 SPATA8Q6RVD6 105 aa10.28□□□□□ -0.76
SLC39A3-201ENST00000269740 A6NN06 94 aa10.28□□□□□ -0.76
SLC39A3-201ENST00000269740 PLAC4Q8WY50 150 aa10.28□□□□□ -0.76
SLC39A3-201ENST00000269740 KRTAP19-6Q3LI70 58 aa10.27□□□□□ -0.77
SLC39A3-201ENST00000269740 KRTAP9-6A0A140TA67 174 aa10.26□□□□□ -0.77
SLC39A3-201ENST00000269740 PSPHP1O15172 72 aa10.2□□□□□ -0.78
SLC39A3-201ENST00000269740 UQCR11O14957 56 aa10.19□□□□□ -0.78
SLC39A3-201ENST00000269740 A0A0D9SG42 100 aa10.14□□□□□ -0.79
SLC39A3-201ENST00000269740 KRTAP10-5P60370 271 aa10.07□□□□□ -0.8
SLC39A3-201ENST00000269740 A8MU10 97 aa10.04□□□□□ -0.8
SLC39A3-201ENST00000269740 PRO2289Q9P1D8 64 aa10.01□□□□□ -0.81
SLC39A3-201ENST00000269740 FCGBPQ9Y6R7 5405 aaPredicted RBP10.01□□□□□ -0.81
SLC39A3-201ENST00000269740 MIR22HGQ0VDD5 57 aa10□□□□□ -0.81
SLC39A3-201ENST00000269740 KRTAP12-1P59990 96 aa9.99□□□□□ -0.81
SLC39A3-201ENST00000269740 SPINT4Q6UDR6 99 aa9.97□□□□□ -0.81
SLC39A3-201ENST00000269740 MT1XP80297 61 aa9.97□□□□□ -0.81
SLC39A3-201ENST00000269740 A6NED7 52 aa9.92□□□□□ -0.82
SLC39A3-201ENST00000269740 KRTAP12-2P59991 146 aa9.92□□□□□ -0.82
SLC39A3-201ENST00000269740 CAMK2N1Q7Z7J9 78 aa9.92□□□□□ -0.82
SLC39A3-201ENST00000269740 K7ERS5 55 aa9.7□□□□□ -0.86
SLC39A3-201ENST00000269740 CDC42SE1Q9NRR8 79 aa9.66□□□□□ -0.86
SLC39A3-201ENST00000269740 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.64□□□□□ -0.87
SLC39A3-201ENST00000269740 MACF1Q9UPN3 7388 aaKnown RBP9.54□□□□□ -0.88
SLC39A3-201ENST00000269740 KRTAP10-7P60409 375 aaPredicted RBP9.51□□□□□ -0.89
SLC39A3-201ENST00000269740 KRTAP10-12P60413 245 aa9.5□□□□□ -0.89
SLC39A3-201ENST00000269740 C10orf95Q9H7T3 257 aa9.48□□□□□ -0.89
SLC39A3-201ENST00000269740 SYNE2Q8WXH0 6885 aaKnown RBP9.35□□□□□ -0.91
SLC39A3-201ENST00000269740 TNP1P09430 55 aa9.35□□□□□ -0.91
SLC39A3-201ENST00000269740 BRK1Q8WUW1 75 aa9.34□□□□□ -0.91
SLC39A3-201ENST00000269740 KRTAP9-7A8MTY7 169 aa9.31□□□□□ -0.92
SLC39A3-201ENST00000269740 KRTAP4-8A0A0G2JLE6 195 aa9.29□□□□□ -0.92
SLC39A3-201ENST00000269740 KRTAP4-8Q9BYQ9 185 aa9.29□□□□□ -0.92
SLC39A3-201ENST00000269740 KRTAP6-3Q3LI67 103 aa9.28□□□□□ -0.92
SLC39A3-201ENST00000269740 KMT2DO14686 5537 aa9.27□□□□□ -0.92
SLC39A3-201ENST00000269740 KRTAP8-1Q8IUC2 63 aa9.25□□□□□ -0.93
SLC39A3-201ENST00000269740 PRO0628Q9UI54 55 aa9.24□□□□□ -0.93
SLC39A3-201ENST00000269740 KRTAP25-1Q3LHN0 102 aa9.2□□□□□ -0.94
SLC39A3-201ENST00000269740 KRTAP5-9P26371 169 aa9.17□□□□□ -0.94
SLC39A3-201ENST00000269740 ROMO1P60602 79 aa9.15□□□□□ -0.94
SLC39A3-201ENST00000269740 SPRR2FQ96RM1 72 aa9.04□□□□□ -0.96
SLC39A3-201ENST00000269740 LCE3AQ5TA76 89 aa9.01□□□□□ -0.97
SLC39A3-201ENST00000269740 KRTAP23-1A1A580 65 aa8.93□□□□□ -0.98
SLC39A3-201ENST00000269740 KRTAP19-7Q3SYF9 63 aa8.9□□□□□ -0.98
SLC39A3-201ENST00000269740 KRTAP19-5Q3LI72 72 aa8.85□□□□□ -0.99
SLC39A3-201ENST00000269740 PMAIP1Q13794 54 aa8.85□□□□□ -0.99
SLC39A3-201ENST00000269740 MUC12Q9UKN1 5478 aa8.83□□□□□ -1
SLC39A3-201ENST00000269740 MT1EP04732 61 aa8.78□□□□□ -1
SLC39A3-201ENST00000269740 PP632Q6XCG6 107 aa8.76□□□□□ -1.01
SLC39A3-201ENST00000269740 MDN1Q9NU22 5596 aa8.73□□□□□ -1.01
SLC39A3-201ENST00000269740 SPRR2EP22531 72 aa8.72□□□□□ -1.01
SLC39A3-201ENST00000269740 SPRR2BP35325 72 aa8.72□□□□□ -1.01
SLC39A3-201ENST00000269740 SPRR2AP35326 72 aa8.72□□□□□ -1.01
SLC39A3-201ENST00000269740 LCE1AQ5T7P2 110 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 159.3 ms