RNA–Protein interactions for RNA: ENST00000264705.8

CAD-201, Transcript of carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAD, Length 7,265 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAD-201ENST00000264705 VPS13CQ709C8 3753 aa5.15□□□□□ -1.59
CAD-201ENST00000264705 COL7A1Q02388 2944 aa5.14□□□□□ -1.59
CAD-201ENST00000264705 SRRM2Q9UQ35 2752 aaKnown RBP5.09□□□□□ -1.59
CAD-201ENST00000264705 SPRR2FQ96RM1 72 aa5.06□□□□□ -1.6
CAD-201ENST00000264705 CSMD3Q7Z407 3707 aa5.05□□□□□ -1.6
CAD-201ENST00000264705 KRTAP10-7P60409 375 aaPredicted RBP5.02□□□□□ -1.61
CAD-201ENST00000264705 AKAP9Q99996 3911 aa5.01□□□□□ -1.61
CAD-201ENST00000264705 MT1HP80294 61 aa4.99□□□□□ -1.61
CAD-201ENST00000264705 DNAH1Q9P2D7 4330 aa4.98□□□□□ -1.61
CAD-201ENST00000264705 DNAH9Q9NYC9 4486 aa4.94□□□□□ -1.62
CAD-201ENST00000264705 KRTAP4-1Q9BYQ7 146 aa4.92□□□□□ -1.62
CAD-201ENST00000264705 MT2AP02795 61 aa4.87□□□□□ -1.63
CAD-201ENST00000264705 DNAH2Q9P225 4427 aa4.86□□□□□ -1.63
CAD-201ENST00000264705 SPRR2EP22531 72 aa4.85□□□□□ -1.63
CAD-201ENST00000264705 SPRR2BP35325 72 aa4.85□□□□□ -1.63
CAD-201ENST00000264705 SPRR2AP35326 72 aa4.85□□□□□ -1.63
CAD-201ENST00000264705 SPRR2GQ9BYE4 73 aa4.81□□□□□ -1.64
CAD-201ENST00000264705 KRTAP19-5Q3LI72 72 aa4.81□□□□□ -1.64
CAD-201ENST00000264705 DNAH10Q8IVF4 4471 aa4.77□□□□□ -1.65
CAD-201ENST00000264705 DNAH3Q8TD57 4116 aa4.77□□□□□ -1.65
CAD-201ENST00000264705 MT1FP04733 61 aa4.75□□□□□ -1.65
CAD-201ENST00000264705 ZNF469Q96JG9 3925 aaPredicted RBP4.74□□□□□ -1.65
CAD-201ENST00000264705 DNAH5Q8TE73 4624 aa4.73□□□□□ -1.65
CAD-201ENST00000264705 LCE3CQ5T5A8 94 aa4.7□□□□□ -1.66
CAD-201ENST00000264705 SPRR2DP22532 72 aa4.69□□□□□ -1.66
CAD-201ENST00000264705 FAT2Q9NYQ8 4349 aa4.69□□□□□ -1.66
CAD-201ENST00000264705 DNAH11Q96DT5 4516 aa4.66□□□□□ -1.66
CAD-201ENST00000264705 DNAH17Q9UFH2 4485 aa4.63□□□□□ -1.67
CAD-201ENST00000264705 LCE3BQ5TA77 95 aa4.62□□□□□ -1.67
CAD-201ENST00000264705 VPS13DQ5THJ4 4388 aa4.62□□□□□ -1.67
CAD-201ENST00000264705 PLECQ15149 4684 aaKnown RBP4.61□□□□□ -1.67
CAD-201ENST00000264705 DYNC2H1Q8NCM8 4307 aaKnown RBP4.6□□□□□ -1.67
CAD-201ENST00000264705 LCE2BO14633 110 aa4.58□□□□□ -1.68
CAD-201ENST00000264705 DNAH8Q96JB1 4490 aa4.57□□□□□ -1.68
CAD-201ENST00000264705 DNAH7Q8WXX0 4024 aa4.57□□□□□ -1.68
CAD-201ENST00000264705 ANK2Q01484 3957 aa4.55□□□□□ -1.68
CAD-201ENST00000264705 KRTAP19-4Q3LI73 84 aa4.52□□□□□ -1.69
CAD-201ENST00000264705 FRAS1Q86XX4 4008 aa4.52□□□□□ -1.69
CAD-201ENST00000264705 LRP1BQ9NZR2 4599 aa4.51□□□□□ -1.69
CAD-201ENST00000264705 PRKDCP78527 4128 aaKnown RBP4.49□□□□□ -1.69
CAD-201ENST00000264705 KRTAP12-4P60329 112 aa4.48□□□□□ -1.69
CAD-201ENST00000264705 DNAH6Q9C0G6 4158 aa4.48□□□□□ -1.69
CAD-201ENST00000264705 CMYA5Q8N3K9 4069 aa4.48□□□□□ -1.69
CAD-201ENST00000264705 MT1GP13640 62 aa4.48□□□□□ -1.69
CAD-201ENST00000264705 VPS13BQ7Z7G8 4022 aa4.46□□□□□ -1.69
CAD-201ENST00000264705 KMT2AQ03164 3969 aa4.45□□□□□ -1.7
CAD-201ENST00000264705 STARD9Q9P2P6 4700 aa4.45□□□□□ -1.7
CAD-201ENST00000264705 DYNC1H1Q14204 4646 aaKnown RBP4.44□□□□□ -1.7
CAD-201ENST00000264705 SACSQ9NZJ4 4579 aa4.44□□□□□ -1.7
CAD-201ENST00000264705 KRTAP19-8Q3LI54 63 aa4.4□□□□□ -1.7
CAD-201ENST00000264705 FAT1Q14517 4588 aa4.4□□□□□ -1.71
CAD-201ENST00000264705 LCE2CQ5TA81 110 aa4.35□□□□□ -1.71
CAD-201ENST00000264705 KRTAP19-1Q8IUB9 90 aa4.34□□□□□ -1.72
CAD-201ENST00000264705 MT1XP80297 61 aa4.33□□□□□ -1.72
CAD-201ENST00000264705 LYSTQ99698 3801 aa4.32□□□□□ -1.72
CAD-201ENST00000264705 LCE2DQ5TA82 110 aaPredicted RBP4.3□□□□□ -1.72
CAD-201ENST00000264705 FAT3Q8TDW7 4589 aa4.27□□□□□ -1.73
CAD-201ENST00000264705 KRTAP4-8A0A0G2JLE6 195 aa4.26□□□□□ -1.73
CAD-201ENST00000264705 KRTAP4-8Q9BYQ9 185 aa4.26□□□□□ -1.73
CAD-201ENST00000264705 APOBP04114 4563 aaKnown RBP4.25□□□□□ -1.73
CAD-201ENST00000264705 MT1BP07438 61 aa4.24□□□□□ -1.73
CAD-201ENST00000264705 MT4P47944 62 aa4.24□□□□□ -1.73
CAD-201ENST00000264705 KRTAP9-8Q9BYQ0 159 aa4.22□□□□□ -1.73
CAD-201ENST00000264705 SPRR5A0A1B0GTR4 108 aa4.22□□□□□ -1.73
CAD-201ENST00000264705 KRTAP17-1Q9BYP8 105 aa4.21□□□□□ -1.73
CAD-201ENST00000264705 LRP1Q07954 4544 aaKnown RBP4.2□□□□□ -1.74
CAD-201ENST00000264705 LCE3DQ9BYE3 92 aa4.19□□□□□ -1.74
CAD-201ENST00000264705 RYR1P21817 5038 aa4.19□□□□□ -1.74
CAD-201ENST00000264705 HECTD4Q9Y4D8 3996 aa4.17□□□□□ -1.74
CAD-201ENST00000264705 DNHD1Q96M86 4753 aa4.16□□□□□ -1.74
CAD-201ENST00000264705 PKHD1L1Q86WI1 4243 aa4.15□□□□□ -1.75
CAD-201ENST00000264705 KRTAP9-3Q9BYQ3 159 aa4.14□□□□□ -1.75
CAD-201ENST00000264705 LCE3EQ5T5B0 92 aa4.08□□□□□ -1.76
CAD-201ENST00000264705 KRTAP19-3Q7Z4W3 81 aa4.07□□□□□ -1.76
CAD-201ENST00000264705 RYR3Q15413 4870 aa4.07□□□□□ -1.76
CAD-201ENST00000264705 LCE1BQ5T7P3 118 aa4.04□□□□□ -1.76
CAD-201ENST00000264705 HSPG2P98160 4391 aa4.02□□□□□ -1.77
CAD-201ENST00000264705 KRTAP9-2Q9BYQ4 174 aa4□□□□□ -1.77
CAD-201ENST00000264705 KRTAP4-7Q9BYR0 210 aa3.99□□□□□ -1.77
CAD-201ENST00000264705 LCE1DQ5T752 114 aa3.99□□□□□ -1.77
CAD-201ENST00000264705 PKD1P98161 4303 aa3.98□□□□□ -1.77
CAD-201ENST00000264705 MT1LQ93083 61 aa3.97□□□□□ -1.77
CAD-201ENST00000264705 HERC1Q15751 4861 aa3.94□□□□□ -1.78
CAD-201ENST00000264705 MT1EP04732 61 aa3.93□□□□□ -1.78
CAD-201ENST00000264705 LPAP08519 4548 aa3.91□□□□□ -1.78
CAD-201ENST00000264705 MT3P25713 68 aa3.89□□□□□ -1.79
CAD-201ENST00000264705 MYCBP2O75592 4640 aa3.89□□□□□ -1.79
CAD-201ENST00000264705 PKHD1P08F94 4074 aa3.86□□□□□ -1.79
CAD-201ENST00000264705 LOC100996750A0A140TA64 210 aa3.85□□□□□ -1.79
CAD-201ENST00000264705 KRTAP9-6A0A140TA67 174 aa3.85□□□□□ -1.79
CAD-201ENST00000264705 MT1MQ8N339 61 aa3.85□□□□□ -1.79
CAD-201ENST00000264705 LCE5AQ5TCM9 118 aa3.84□□□□□ -1.79
CAD-201ENST00000264705 TNXBP22105 4242 aa3.84□□□□□ -1.79
CAD-201ENST00000264705 PRM1P04553 51 aa3.83□□□□□ -1.8
CAD-201ENST00000264705 KRTAP20-1Q3LI63 56 aa3.83□□□□□ -1.8
CAD-201ENST00000264705 RYR2Q92736 4967 aa3.82□□□□□ -1.8
CAD-201ENST00000264705 KRTAP19-6Q3LI70 58 aa3.79□□□□□ -1.8
CAD-201ENST00000264705 KRTAP4-3Q9BYR4 195 aa3.78□□□□□ -1.8
CAD-201ENST00000264705 MUC17Q685J3 4493 aa3.78□□□□□ -1.81
CAD-201ENST00000264705 FLGP20930 4061 aaPredicted RBP3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms