RNA–Protein interactions for RNA: ENST00000263857.10

POLR1A-201, Transcript of RNA polymerase I subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR1A, Length 12,749 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-201ENST00000263857 CSMD1Q96PZ7 3565 aa2.97□□□□□ -1.93
POLR1A-201ENST00000263857 KRTAP19-4Q3LI73 84 aa2.96□□□□□ -1.94
POLR1A-201ENST00000263857 HUWE1Q7Z6Z7 4374 aaKnown RBP2.95□□□□□ -1.94
POLR1A-201ENST00000263857 KRTAP10-5P60370 271 aa2.93□□□□□ -1.94
POLR1A-201ENST00000263857 CSMD2Q7Z408 3487 aa2.92□□□□□ -1.94
POLR1A-201ENST00000263857 KMT2AQ03164 3969 aa2.9□□□□□ -1.95
POLR1A-201ENST00000263857 DNAH6Q9C0G6 4158 aa2.9□□□□□ -1.95
POLR1A-201ENST00000263857 DNAH10Q8IVF4 4471 aa2.9□□□□□ -1.95
POLR1A-201ENST00000263857 SVEP1Q4LDE5 3571 aa2.88□□□□□ -1.95
POLR1A-201ENST00000263857 KRTAP3-2Q9BYR7 98 aa2.87□□□□□ -1.95
POLR1A-201ENST00000263857 MT3P25713 68 aa2.87□□□□□ -1.95
POLR1A-201ENST00000263857 FRAS1Q86XX4 4008 aa2.87□□□□□ -1.95
POLR1A-201ENST00000263857 FLGP20930 4061 aaPredicted RBP2.85□□□□□ -1.95
POLR1A-201ENST00000263857 KRTAP8-1Q8IUC2 63 aa2.83□□□□□ -1.96
POLR1A-201ENST00000263857 VPS13BQ7Z7G8 4022 aa2.83□□□□□ -1.96
POLR1A-201ENST00000263857 PRKDCP78527 4128 aaKnown RBP2.83□□□□□ -1.96
POLR1A-201ENST00000263857 LCE3AQ5TA76 89 aa2.82□□□□□ -1.96
POLR1A-201ENST00000263857 ANK3Q12955 4377 aaKnown RBP2.82□□□□□ -1.96
POLR1A-201ENST00000263857 VPS13DQ5THJ4 4388 aa2.81□□□□□ -1.96
POLR1A-201ENST00000263857 KRTAP3-3Q9BYR6 98 aa2.79□□□□□ -1.96
POLR1A-201ENST00000263857 DNAH11Q96DT5 4516 aa2.76□□□□□ -1.97
POLR1A-201ENST00000263857 PKHD1P08F94 4074 aa2.73□□□□□ -1.97
POLR1A-201ENST00000263857 KRTAP10-7P60409 375 aaPredicted RBP2.71□□□□□ -1.98
POLR1A-201ENST00000263857 MT1HL1P0DM35 61 aa2.7□□□□□ -1.98
POLR1A-201ENST00000263857 DNAH17Q9UFH2 4485 aa2.67□□□□□ -1.98
POLR1A-201ENST00000263857 DNHD1Q96M86 4753 aa2.63□□□□□ -1.99
POLR1A-201ENST00000263857 DNAH8Q96JB1 4490 aa2.61□□□□□ -1.99
POLR1A-201ENST00000263857 LRP1Q07954 4544 aaKnown RBP2.61□□□□□ -1.99
POLR1A-201ENST00000263857 LCE3CQ5T5A8 94 aa2.6□□□□□ -1.99
POLR1A-201ENST00000263857 DYNC2H1Q8NCM8 4307 aaKnown RBP2.59□□□□□ -1.99
POLR1A-201ENST00000263857 LORP23490 312 aaPredicted RBP2.58□□□□□ -2
POLR1A-201ENST00000263857 RYR1P21817 5038 aa2.56□□□□□ -2
POLR1A-201ENST00000263857 KRTAP10-4P60372 401 aaPredicted RBP2.56□□□□□ -2
POLR1A-201ENST00000263857 DNAH9Q9NYC9 4486 aa2.56□□□□□ -2
POLR1A-201ENST00000263857 SACSQ9NZJ4 4579 aa2.55□□□□□ -2
POLR1A-201ENST00000263857 SPRR2FQ96RM1 72 aa2.54□□□□□ -2
POLR1A-201ENST00000263857 SPRR2GQ9BYE4 73 aa2.53□□□□□ -2
POLR1A-201ENST00000263857 KRTAP19-5Q3LI72 72 aa2.52□□□□□ -2.01
POLR1A-201ENST00000263857 MYCBP2O75592 4640 aa2.52□□□□□ -2.01
POLR1A-201ENST00000263857 DNAH5Q8TE73 4624 aa2.51□□□□□ -2.01
POLR1A-201ENST00000263857 FAT2Q9NYQ8 4349 aa2.5□□□□□ -2.01
POLR1A-201ENST00000263857 PLECQ15149 4684 aaKnown RBP2.5□□□□□ -2.01
POLR1A-201ENST00000263857 DYNC1H1Q14204 4646 aaKnown RBP2.5□□□□□ -2.01
POLR1A-201ENST00000263857 HSPG2P98160 4391 aa2.49□□□□□ -2.01
POLR1A-201ENST00000263857 PKHD1L1Q86WI1 4243 aa2.48□□□□□ -2.01
POLR1A-201ENST00000263857 KRTAP12-4P60329 112 aa2.47□□□□□ -2.01
POLR1A-201ENST00000263857 PKD1P98161 4303 aa2.47□□□□□ -2.01
POLR1A-201ENST00000263857 KRTAP4-5Q9BYR2 181 aa2.44□□□□□ -2.02
POLR1A-201ENST00000263857 TNXBP22105 4242 aa2.41□□□□□ -2.02
POLR1A-201ENST00000263857 LCE3BQ5TA77 95 aa2.41□□□□□ -2.02
POLR1A-201ENST00000263857 HYDINQ4G0P3 5121 aa2.41□□□□□ -2.02
POLR1A-201ENST00000263857 APOBP04114 4563 aaKnown RBP2.41□□□□□ -2.02
POLR1A-201ENST00000263857 MT2AP02795 61 aa2.4□□□□□ -2.03
POLR1A-201ENST00000263857 MT1HP80294 61 aa2.39□□□□□ -2.03
POLR1A-201ENST00000263857 FAT1Q14517 4588 aa2.39□□□□□ -2.03
POLR1A-201ENST00000263857 LCE3EQ5T5B0 92 aa2.37□□□□□ -2.03
POLR1A-201ENST00000263857 LCE3DQ9BYE3 92 aa2.37□□□□□ -2.03
POLR1A-201ENST00000263857 LRP2P98164 4655 aa2.37□□□□□ -2.03
POLR1A-201ENST00000263857 SPRR2EP22531 72 aa2.36□□□□□ -2.03
POLR1A-201ENST00000263857 SPRR2BP35325 72 aa2.36□□□□□ -2.03
POLR1A-201ENST00000263857 SPRR2AP35326 72 aa2.36□□□□□ -2.03
POLR1A-201ENST00000263857 BIRC6Q9NR09 4857 aa2.36□□□□□ -2.03
POLR1A-201ENST00000263857 FAT3Q8TDW7 4589 aa2.36□□□□□ -2.03
POLR1A-201ENST00000263857 SPRR5A0A1B0GTR4 108 aa2.35□□□□□ -2.03
POLR1A-201ENST00000263857 SPRR2DP22532 72 aa2.33□□□□□ -2.04
POLR1A-201ENST00000263857 LCE2BO14633 110 aa2.33□□□□□ -2.04
POLR1A-201ENST00000263857 RYR2Q92736 4967 aa2.31□□□□□ -2.04
POLR1A-201ENST00000263857 MUC12Q9UKN1 5478 aa2.31□□□□□ -2.04
POLR1A-201ENST00000263857 MT1FP04733 61 aa2.31□□□□□ -2.04
POLR1A-201ENST00000263857 HERC2O95714 4834 aa2.31□□□□□ -2.04
POLR1A-201ENST00000263857 MT1GP13640 62 aa2.3□□□□□ -2.04
POLR1A-201ENST00000263857 KMT2CQ8NEZ4 4911 aaKnown RBP2.3□□□□□ -2.04
POLR1A-201ENST00000263857 PCLOQ9Y6V0 5065 aa2.29□□□□□ -2.04
POLR1A-201ENST00000263857 STARD9Q9P2P6 4700 aa2.29□□□□□ -2.04
POLR1A-201ENST00000263857 KRTAP19-8Q3LI54 63 aa2.29□□□□□ -2.04
POLR1A-201ENST00000263857 RYR3Q15413 4870 aa2.29□□□□□ -2.04
POLR1A-201ENST00000263857 UBR4Q5T4S7 5183 aa2.28□□□□□ -2.04
POLR1A-201ENST00000263857 KRTAP4-1Q9BYQ7 146 aa2.28□□□□□ -2.04
POLR1A-201ENST00000263857 ABCA13Q86UQ4 5058 aa2.27□□□□□ -2.05
POLR1A-201ENST00000263857 LRP1BQ9NZR2 4599 aa2.25□□□□□ -2.05
POLR1A-201ENST00000263857 RNF213Q63HN8 5207 aa2.24□□□□□ -2.05
POLR1A-201ENST00000263857 HMCN2Q8NDA2 5059 aa2.23□□□□□ -2.05
POLR1A-201ENST00000263857 LCE2CQ5TA81 110 aa2.22□□□□□ -2.05
POLR1A-201ENST00000263857 MT1XP80297 61 aa2.2□□□□□ -2.06
POLR1A-201ENST00000263857 MT1LQ93083 61 aa2.17□□□□□ -2.06
POLR1A-201ENST00000263857 KRTAP19-3Q7Z4W3 81 aa2.15□□□□□ -2.07
POLR1A-201ENST00000263857 LCE2DQ5TA82 110 aaPredicted RBP2.13□□□□□ -2.07
POLR1A-201ENST00000263857 PRM1P04553 51 aa2.13□□□□□ -2.07
POLR1A-201ENST00000263857 KRTAP19-1Q8IUB9 90 aa2.12□□□□□ -2.07
POLR1A-201ENST00000263857 HERC1Q15751 4861 aa2.11□□□□□ -2.07
POLR1A-201ENST00000263857 MUC17Q685J3 4493 aa2.1□□□□□ -2.07
POLR1A-201ENST00000263857 EPPK1P58107 5090 aaKnown RBP2.09□□□□□ -2.08
POLR1A-201ENST00000263857 KIAA1109Q2LD37 5005 aa2.08□□□□□ -2.08
POLR1A-201ENST00000263857 MT1EP04732 61 aa2.05□□□□□ -2.08
POLR1A-201ENST00000263857 LCE1DQ5T752 114 aa2.04□□□□□ -2.08
POLR1A-201ENST00000263857 MT1BP07438 61 aa2.04□□□□□ -2.08
POLR1A-201ENST00000263857 LCE1BQ5T7P3 118 aa2.03□□□□□ -2.08
POLR1A-201ENST00000263857 MT1MQ8N339 61 aa2□□□□□ -2.09
POLR1A-201ENST00000263857 KRTAP9-8Q9BYQ0 159 aa1.98□□□□□ -2.09
POLR1A-201ENST00000263857 MT4P47944 62 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms