RNA–Protein interactions for RNA: ENST00000263857.10

POLR1A-201, Transcript of RNA polymerase I subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR1A, Length 12,749 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-201ENST00000263857 PELP1Q8IZL8 1130 aaKnown RBP11.35□□□□□ -0.59
POLR1A-201ENST00000263857 MYT1Q01538 1121 aa10.81□□□□□ -0.68
POLR1A-201ENST00000263857 CCER1Q8TC90 406 aaPredicted RBP10.74□□□□□ -0.69
POLR1A-201ENST00000263857 ERICH6Q7L0X2 663 aa10.62□□□□□ -0.71
POLR1A-201ENST00000263857 DCAF8L2P0C7V8 631 aa10.53□□□□□ -0.72
POLR1A-201ENST00000263857 YTHDC1Q96MU7 727 aaKnown RBP10.49□□□□□ -0.73
POLR1A-201ENST00000263857 FAM9AQ8IZU1 332 aaPredicted RBP10.39□□□□□ -0.75
POLR1A-201ENST00000263857 CENPBP07199 599 aaPredicted RBP10.39□□□□□ -0.75
POLR1A-201ENST00000263857 APLP2Q06481 763 aa10.37□□□□□ -0.75
POLR1A-201ENST00000263857 NEFLP07196 543 aa10.26□□□□□ -0.77
POLR1A-201ENST00000263857 ZEB1P37275 1124 aaPredicted RBP10.18□□□□□ -0.78
POLR1A-201ENST00000263857 TTBK1Q5TCY1 1321 aaPredicted RBP10.18□□□□□ -0.78
POLR1A-201ENST00000263857 DAXXQ9UER7 740 aaPredicted RBP10.16□□□□□ -0.78
POLR1A-201ENST00000263857 SUPT5HO00267 1087 aaKnown RBP10.05□□□□□ -0.8
POLR1A-201ENST00000263857 RTL5Q5HYW3 569 aaPredicted RBP9.93□□□□□ -0.82
POLR1A-201ENST00000263857 ZNF316A6NFI3 1004 aaPredicted RBP9.86□□□□□ -0.83
POLR1A-201ENST00000263857 PCGF6Q9BYE7 350 aa9.8□□□□□ -0.84
POLR1A-201ENST00000263857 EHMT2Q96KQ7 1210 aa9.75□□□□□ -0.85
POLR1A-201ENST00000263857 CLSPNQ9HAW4 1339 aa9.66□□□□□ -0.86
POLR1A-201ENST00000263857 GLIPR1L2Q4G1C9 344 aa9.64□□□□□ -0.87
POLR1A-201ENST00000263857 NISCHQ9Y2I1 1504 aa9.64□□□□□ -0.87
POLR1A-201ENST00000263857 SHROOM4Q9ULL8 1493 aa9.61□□□□□ -0.87
POLR1A-201ENST00000263857 ZBTB47Q9UFB7 747 aaPredicted RBP9.55□□□□□ -0.88
POLR1A-201ENST00000263857 ANP32BQ92688 251 aaKnown RBP9.54□□□□□ -0.88
POLR1A-201ENST00000263857 ATP1B4Q9UN42 357 aaPredicted RBP9.53□□□□□ -0.88
POLR1A-201ENST00000263857 UBTFP17480 764 aaKnown RBP9.5□□□□□ -0.89
POLR1A-201ENST00000263857 MYT1LQ9UL68 1186 aa9.49□□□□□ -0.89
POLR1A-201ENST00000263857 NEFMP07197 916 aa9.47□□□□□ -0.89
POLR1A-201ENST00000263857 TRIM41Q8WV44 630 aa9.46□□□□□ -0.89
POLR1A-201ENST00000263857 RANGAP1P46060 587 aaPredicted RBP9.41□□□□□ -0.9
POLR1A-201ENST00000263857 POLR3GLQ9BT43 218 aa9.39□□□□□ -0.91
POLR1A-201ENST00000263857 CDK11AQ9UQ88 783 aaPredicted RBP9.38□□□□□ -0.91
POLR1A-201ENST00000263857 TRIM26Q12899 539 aaPredicted RBP9.37□□□□□ -0.91
POLR1A-201ENST00000263857 ANP32AP39687 249 aaKnown RBP9.36□□□□□ -0.91
POLR1A-201ENST00000263857 SLC4A1APQ9BWU0 796 aaKnown RBP9.34□□□□□ -0.91
POLR1A-201ENST00000263857 HRCP23327 699 aa9.32□□□□□ -0.92
POLR1A-201ENST00000263857 CANXP27824 592 aaKnown RBP9.31□□□□□ -0.92
POLR1A-201ENST00000263857 CDK11BP21127 795 aaKnown RBP9.31□□□□□ -0.92
POLR1A-201ENST00000263857 TNNT2P45379 298 aaPredicted RBP9.3□□□□□ -0.92
POLR1A-201ENST00000263857 EIF5BO60841 1220 aaKnown RBP9.29□□□□□ -0.92
POLR1A-201ENST00000263857 HSP90AA1P07900 732 aaKnown RBP9.27□□□□□ -0.93
POLR1A-201ENST00000263857 UPF2Q9HAU5 1272 aaKnown RBP9.25□□□□□ -0.93
POLR1A-201ENST00000263857 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.23□□□□□ -0.93
POLR1A-201ENST00000263857 HNRNPUL2Q1KMD3 747 aaKnown RBP9.23□□□□□ -0.93
POLR1A-201ENST00000263857 ANP32CO43423 234 aa9.21□□□□□ -0.94
POLR1A-201ENST00000263857 ANP32EQ9BTT0 268 aa9.19□□□□□ -0.94
POLR1A-201ENST00000263857 DIEXFQ68CQ4 756 aaKnown RBP9.18□□□□□ -0.94
POLR1A-201ENST00000263857 TRIM44Q96DX7 344 aaPredicted RBP9.17□□□□□ -0.94
POLR1A-201ENST00000263857 ITGAEP38570 1179 aa9.13□□□□□ -0.95
POLR1A-201ENST00000263857 NCLP19338 710 aaKnown RBP9.1□□□□□ -0.95
POLR1A-201ENST00000263857 CNGB1Q14028 1251 aaPredicted RBP9.08□□□□□ -0.96
POLR1A-201ENST00000263857 SLC24A1O60721 1099 aa9.06□□□□□ -0.96
POLR1A-201ENST00000263857 CHIC1Q5VXU3 224 aa9.05□□□□□ -0.96
POLR1A-201ENST00000263857 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.04□□□□□ -0.96
POLR1A-201ENST00000263857 GOLGA6L22H0YM25 854 aa9.04□□□□□ -0.96
POLR1A-201ENST00000263857 BCANQ96GW7 911 aa9.04□□□□□ -0.96
POLR1A-201ENST00000263857 GTF3C3Q9Y5Q9 886 aa9.01□□□□□ -0.97
POLR1A-201ENST00000263857 NRDCO43847 1150 aa9.01□□□□□ -0.97
POLR1A-201ENST00000263857 BECN1Q14457 450 aa9.01□□□□□ -0.97
POLR1A-201ENST00000263857 NPM2Q86SE8 214 aaKnown RBP9□□□□□ -0.97
POLR1A-201ENST00000263857 GOLGA6L6A8MZA4 724 aa9□□□□□ -0.97
POLR1A-201ENST00000263857 MYH16Q9H6N6 1097 aa9□□□□□ -0.97
POLR1A-201ENST00000263857 ZRSR1Q15695 479 aaKnown RBP9□□□□□ -0.97
POLR1A-201ENST00000263857 L1TD1Q5T7N2 865 aaKnown RBP8.99□□□□□ -0.97
POLR1A-201ENST00000263857 TRIM52Q96A61 297 aa8.99□□□□□ -0.97
POLR1A-201ENST00000263857 DDRGK1Q96HY6 314 aa8.98□□□□□ -0.97
POLR1A-201ENST00000263857 ERICH6BQ5W0A0 696 aa8.97□□□□□ -0.97
POLR1A-201ENST00000263857 BCL11AQ9H165 835 aa8.95□□□□□ -0.98
POLR1A-201ENST00000263857 FAM50AQ14320 339 aaKnown RBP8.94□□□□□ -0.98
POLR1A-201ENST00000263857 PPARGC1BQ86YN6 1023 aaKnown RBP8.94□□□□□ -0.98
POLR1A-201ENST00000263857 PTMAP06454 111 aaKnown RBP8.93□□□□□ -0.98
POLR1A-201ENST00000263857 CHAF1AQ13111 956 aaPredicted RBP8.93□□□□□ -0.98
POLR1A-201ENST00000263857 ZNF326Q5BKZ1 582 aaKnown RBP8.92□□□□□ -0.98
POLR1A-201ENST00000263857 ACIN1Q9UKV3 1341 aaKnown RBP8.89□□□□□ -0.99
POLR1A-201ENST00000263857 CASC1Q6TDU7 716 aa8.88□□□□□ -0.99
POLR1A-201ENST00000263857 NEUROD1Q13562 356 aa8.87□□□□□ -0.99
POLR1A-201ENST00000263857 USP35Q9P2H5 1018 aa8.87□□□□□ -0.99
POLR1A-201ENST00000263857 CCDC136Q96JN2 1154 aa8.87□□□□□ -0.99
POLR1A-201ENST00000263857 DNTTIP2Q5QJE6 756 aaKnown RBP8.87□□□□□ -0.99
POLR1A-201ENST00000263857 ESF1Q9H501 851 aaKnown RBP8.84□□□□□ -0.99
POLR1A-201ENST00000263857 NBR1Q14596 966 aa8.84□□□□□ -1
POLR1A-201ENST00000263857 NAP1L5Q96NT1 182 aaPredicted RBP8.82□□□□□ -1
POLR1A-201ENST00000263857 PPM1GO15355 546 aaPredicted RBP8.81□□□□□ -1
POLR1A-201ENST00000263857 CALRP27797 417 aaKnown RBP8.81□□□□□ -1
POLR1A-201ENST00000263857 ARXQ96QS3 562 aa8.79□□□□□ -1
POLR1A-201ENST00000263857 CHMP4BQ9H444 224 aaKnown RBP8.79□□□□□ -1
POLR1A-201ENST00000263857 KIAA2012Q0VF49 1180 aa8.78□□□□□ -1
POLR1A-201ENST00000263857 TONSLQ96HA7 1378 aa8.78□□□□□ -1
POLR1A-201ENST00000263857 WDR43Q15061 677 aaKnown RBP eCLIP8.77□□□□□ -1.01
POLR1A-201ENST00000263857 FKBP8Q14318 412 aa8.76□□□□□ -1.01
POLR1A-201ENST00000263857 PNNQ9H307 717 aaKnown RBP8.75□□□□□ -1.01
POLR1A-201ENST00000263857 TNNT3P45378 269 aaPredicted RBP8.74□□□□□ -1.01
POLR1A-201ENST00000263857 PTMSP20962 102 aa8.74□□□□□ -1.01
POLR1A-201ENST00000263857 NOC3LQ8WTT2 800 aaKnown RBP8.74□□□□□ -1.01
POLR1A-201ENST00000263857 HNRNPUQ00839 825 aaKnown RBP eCLIP8.73□□□□□ -1.01
POLR1A-201ENST00000263857 STAG3Q9UJ98 1225 aa8.73□□□□□ -1.01
POLR1A-201ENST00000263857 ARID4BQ4LE39 1312 aaPredicted RBP8.73□□□□□ -1.01
POLR1A-201ENST00000263857 CFAP44Q96MT7 982 aa8.72□□□□□ -1.01
POLR1A-201ENST00000263857 GOLGA6L1Q8N7Z2 621 aa8.72□□□□□ -1.01
POLR1A-201ENST00000263857 MSNP26038 577 aaKnown RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms