RNA–Protein interactions for RNA: ENST00000263578.9

FOXRED1-201, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene FOXRED1, Length 1,970 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-201ENST00000263578 SPTSSBQ8NFR3 76 aa8.24□□□□□ -1.09
FOXRED1-201ENST00000263578 CDC42SE1Q9NRR8 79 aa8.2□□□□□ -1.1
FOXRED1-201ENST00000263578 LINC01558Q9Y6Z2 57 aa8.2□□□□□ -1.1
FOXRED1-201ENST00000263578 LPAP08519 4548 aa8.16□□□□□ -1.1
FOXRED1-201ENST00000263578 LRP2P98164 4655 aa8.15□□□□□ -1.1
FOXRED1-201ENST00000263578 A6NED7 52 aa8.14□□□□□ -1.11
FOXRED1-201ENST00000263578 COX6B2Q6YFQ2 88 aa8.13□□□□□ -1.11
FOXRED1-201ENST00000263578 KRTAP3-1Q9BYR8 98 aa8.13□□□□□ -1.11
FOXRED1-201ENST00000263578 PCLOQ9Y6V0 5065 aa8.08□□□□□ -1.12
FOXRED1-201ENST00000263578 SEC61BP60468 96 aaKnown RBP8.04□□□□□ -1.12
FOXRED1-201ENST00000263578 LINC01554Q52M75 96 aa8.04□□□□□ -1.12
FOXRED1-201ENST00000263578 HERC1Q15751 4861 aa7.92□□□□□ -1.14
FOXRED1-201ENST00000263578 A0A1B0GU69 56 aa7.92□□□□□ -1.14
FOXRED1-201ENST00000263578 H1FX-AS1Q4G0G2 97 aa7.89□□□□□ -1.15
FOXRED1-201ENST00000263578 PRAC1Q96KF2 57 aa7.88□□□□□ -1.15
FOXRED1-201ENST00000263578 S4R3F8 94 aa7.88□□□□□ -1.15
FOXRED1-201ENST00000263578 MUC17Q685J3 4493 aa7.88□□□□□ -1.15
FOXRED1-201ENST00000263578 HMCN2Q8NDA2 5059 aa7.87□□□□□ -1.15
FOXRED1-201ENST00000263578 KRTAP4-1Q9BYQ7 146 aa7.85□□□□□ -1.15
FOXRED1-201ENST00000263578 KRTAP3-3Q9BYR6 98 aa7.84□□□□□ -1.15
FOXRED1-201ENST00000263578 SPATA8Q6RVD6 105 aa7.79□□□□□ -1.16
FOXRED1-201ENST00000263578 ADM2Q7Z4H4 148 aa7.77□□□□□ -1.17
FOXRED1-201ENST00000263578 UQCR11O14957 56 aa7.75□□□□□ -1.17
FOXRED1-201ENST00000263578 MIR22HGQ0VDD5 57 aa7.71□□□□□ -1.17
FOXRED1-201ENST00000263578 CSAG1Q6PB30 78 aa7.67□□□□□ -1.18
FOXRED1-201ENST00000263578 KRTAP19-2Q3LHN2 52 aa7.66□□□□□ -1.18
FOXRED1-201ENST00000263578 A0A1B0GU33 70 aa7.62□□□□□ -1.19
FOXRED1-201ENST00000263578 MUC2Q02817 5179 aa7.6□□□□□ -1.19
FOXRED1-201ENST00000263578 KRTAP10-6P60371 365 aaPredicted RBP7.6□□□□□ -1.19
FOXRED1-201ENST00000263578 KRTAP3-2Q9BYR7 98 aa7.6□□□□□ -1.19
FOXRED1-201ENST00000263578 H0YAA0 97 aa7.55□□□□□ -1.2
FOXRED1-201ENST00000263578 P0C880 135 aa7.53□□□□□ -1.2
FOXRED1-201ENST00000263578 FLGP20930 4061 aaPredicted RBP7.5□□□□□ -1.21
FOXRED1-201ENST00000263578 ROMO1P60602 79 aa7.5□□□□□ -1.21
FOXRED1-201ENST00000263578 UBR4Q5T4S7 5183 aa7.49□□□□□ -1.21
FOXRED1-201ENST00000263578 RNF213Q63HN8 5207 aa7.47□□□□□ -1.21
FOXRED1-201ENST00000263578 KRTAP13-4Q3LI77 160 aa7.43□□□□□ -1.22
FOXRED1-201ENST00000263578 LCE2CQ5TA81 110 aa7.42□□□□□ -1.22
FOXRED1-201ENST00000263578 KRTAP25-1Q3LHN0 102 aa7.37□□□□□ -1.23
FOXRED1-201ENST00000263578 M0QZ58 72 aa7.34□□□□□ -1.23
FOXRED1-201ENST00000263578 A0A0D9SG42 100 aa7.31□□□□□ -1.24
FOXRED1-201ENST00000263578 FAT4Q6V0I7 4981 aa7.3□□□□□ -1.24
FOXRED1-201ENST00000263578 A0A0A0MQY5 61 aa7.29□□□□□ -1.24
FOXRED1-201ENST00000263578 MT1HP80294 61 aa7.28□□□□□ -1.24
FOXRED1-201ENST00000263578 R4GN34 69 aa7.28□□□□□ -1.24
FOXRED1-201ENST00000263578 K7ERS5 55 aa7.26□□□□□ -1.25
FOXRED1-201ENST00000263578 LORP23490 312 aaPredicted RBP7.24□□□□□ -1.25
FOXRED1-201ENST00000263578 M0R2T5 61 aa7.23□□□□□ -1.25
FOXRED1-201ENST00000263578 KRTAP12-1P59990 96 aa7.15□□□□□ -1.26
FOXRED1-201ENST00000263578 KRTAP12-2P59991 146 aa7.14□□□□□ -1.27
FOXRED1-201ENST00000263578 CRIPTQ9P021 101 aa7.13□□□□□ -1.27
FOXRED1-201ENST00000263578 SPINT4Q6UDR6 99 aa7.13□□□□□ -1.27
FOXRED1-201ENST00000263578 MT2AP02795 61 aa7.02□□□□□ -1.29
FOXRED1-201ENST00000263578 KRTAP9-8Q9BYQ0 159 aa7.02□□□□□ -1.29
FOXRED1-201ENST00000263578 MT1FP04733 61 aa6.99□□□□□ -1.29
FOXRED1-201ENST00000263578 KRTAP10-10P60014 251 aa6.98□□□□□ -1.29
FOXRED1-201ENST00000263578 NDUFAF8A1L188 74 aa6.96□□□□□ -1.3
FOXRED1-201ENST00000263578 SPRR2GQ9BYE4 73 aa6.95□□□□□ -1.3
FOXRED1-201ENST00000263578 KRTAP19-1Q8IUB9 90 aa6.92□□□□□ -1.3
FOXRED1-201ENST00000263578 KRTAP15-1Q3LI76 137 aa6.91□□□□□ -1.3
FOXRED1-201ENST00000263578 LCE2AQ5TA79 106 aaPredicted RBP6.87□□□□□ -1.31
FOXRED1-201ENST00000263578 CAMK2N1Q7Z7J9 78 aa6.84□□□□□ -1.32
FOXRED1-201ENST00000263578 PLAC4Q8WY50 150 aa6.77□□□□□ -1.33
FOXRED1-201ENST00000263578 KRTAP9-3Q9BYQ3 159 aa6.76□□□□□ -1.33
FOXRED1-201ENST00000263578 C10orf95Q9H7T3 257 aa6.75□□□□□ -1.33
FOXRED1-201ENST00000263578 KRTAP19-8Q3LI54 63 aa6.75□□□□□ -1.33
FOXRED1-201ENST00000263578 LUZP6Q538Z0 58 aa6.75□□□□□ -1.33
FOXRED1-201ENST00000263578 MT1BP07438 61 aa6.65□□□□□ -1.34
FOXRED1-201ENST00000263578 LCE2BO14633 110 aa6.55□□□□□ -1.36
FOXRED1-201ENST00000263578 TNP1P09430 55 aa6.52□□□□□ -1.37
FOXRED1-201ENST00000263578 MT1XP80297 61 aa6.48□□□□□ -1.37
FOXRED1-201ENST00000263578 KRTAP10-5P60370 271 aa6.46□□□□□ -1.37
FOXRED1-201ENST00000263578 PP632Q6XCG6 107 aa6.41□□□□□ -1.38
FOXRED1-201ENST00000263578 PRO2289Q9P1D8 64 aa6.38□□□□□ -1.39
FOXRED1-201ENST00000263578 KRTAP23-1A1A580 65 aa6.35□□□□□ -1.39
FOXRED1-201ENST00000263578 USH2AO75445 5202 aa6.35□□□□□ -1.39
FOXRED1-201ENST00000263578 KRTAP10-7P60409 375 aaPredicted RBP6.22□□□□□ -1.41
FOXRED1-201ENST00000263578 LCE3AQ5TA76 89 aa6.22□□□□□ -1.41
FOXRED1-201ENST00000263578 KRTAP10-12P60413 245 aa6.2□□□□□ -1.42
FOXRED1-201ENST00000263578 LCE2DQ5TA82 110 aaPredicted RBP6.17□□□□□ -1.42
FOXRED1-201ENST00000263578 SSPOA2VEC9 5147 aa6.17□□□□□ -1.42
FOXRED1-201ENST00000263578 KRTAP19-6Q3LI70 58 aa6.11□□□□□ -1.43
FOXRED1-201ENST00000263578 KRTAP8-1Q8IUC2 63 aa6.09□□□□□ -1.43
FOXRED1-201ENST00000263578 FSIP2Q5CZC0 6907 aa5.99□□□□□ -1.45
FOXRED1-201ENST00000263578 KRTAP9-2Q9BYQ4 174 aa5.98□□□□□ -1.45
FOXRED1-201ENST00000263578 KRTAP12-3P60328 96 aa5.97□□□□□ -1.45
FOXRED1-201ENST00000263578 KRTAP4-8A0A0G2JLE6 195 aa5.93□□□□□ -1.46
FOXRED1-201ENST00000263578 KRTAP4-8Q9BYQ9 185 aa5.93□□□□□ -1.46
FOXRED1-201ENST00000263578 KMT2DO14686 5537 aa5.92□□□□□ -1.46
FOXRED1-201ENST00000263578 KRTAP19-5Q3LI72 72 aa5.88□□□□□ -1.47
FOXRED1-201ENST00000263578 SPRR5A0A1B0GTR4 108 aa5.86□□□□□ -1.47
FOXRED1-201ENST00000263578 FCGBPQ9Y6R7 5405 aaPredicted RBP5.83□□□□□ -1.48
FOXRED1-201ENST00000263578 KRTAP19-7Q3SYF9 63 aa5.77□□□□□ -1.49
FOXRED1-201ENST00000263578 INE1O15225 51 aa5.71□□□□□ -1.49
FOXRED1-201ENST00000263578 CRCT1Q9UGL9 99 aa5.68□□□□□ -1.5
FOXRED1-201ENST00000263578 KRTAP9-6A0A140TA67 174 aa5.66□□□□□ -1.5
FOXRED1-201ENST00000263578 MT1EP04732 61 aa5.66□□□□□ -1.5
FOXRED1-201ENST00000263578 LCE3CQ5T5A8 94 aa5.58□□□□□ -1.52
FOXRED1-201ENST00000263578 MT1LQ93083 61 aa5.57□□□□□ -1.52
FOXRED1-201ENST00000263578 KRTAP19-4Q3LI73 84 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms