RNA–Protein interactions for RNA: ENST00000262105.6

MCM4-201, Transcript of minichromosome maintenance complex component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MCM4, Length 4,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM4-201ENST00000262105 KIAA1109Q2LD37 5005 aa8.28□□□□□ -1.08
MCM4-201ENST00000262105 CAMK2N1Q7Z7J9 78 aa8.27□□□□□ -1.09
MCM4-201ENST00000262105 SACSQ9NZJ4 4579 aa8.25□□□□□ -1.09
MCM4-201ENST00000262105 HECTD4Q9Y4D8 3996 aa8.21□□□□□ -1.1
MCM4-201ENST00000262105 KRTAP3-1Q9BYR8 98 aa8.18□□□□□ -1.1
MCM4-201ENST00000262105 VPS13BQ7Z7G8 4022 aa8.18□□□□□ -1.1
MCM4-201ENST00000262105 RYR1P21817 5038 aa8.18□□□□□ -1.1
MCM4-201ENST00000262105 RYR3Q15413 4870 aa8.17□□□□□ -1.1
MCM4-201ENST00000262105 FRAS1Q86XX4 4008 aa8.17□□□□□ -1.1
MCM4-201ENST00000262105 FAT2Q9NYQ8 4349 aa8.15□□□□□ -1.11
MCM4-201ENST00000262105 KMT2CQ8NEZ4 4911 aaKnown RBP8.13□□□□□ -1.11
MCM4-201ENST00000262105 PKHD1P08F94 4074 aa8.13□□□□□ -1.11
MCM4-201ENST00000262105 RYR2Q92736 4967 aa8.11□□□□□ -1.11
MCM4-201ENST00000262105 APOBP04114 4563 aaKnown RBP8.11□□□□□ -1.11
MCM4-201ENST00000262105 P0C880 135 aa8.08□□□□□ -1.12
MCM4-201ENST00000262105 H0YAA0 97 aa8.04□□□□□ -1.12
MCM4-201ENST00000262105 LRP1Q07954 4544 aaKnown RBP8.04□□□□□ -1.12
MCM4-201ENST00000262105 MYCBP2O75592 4640 aa8.03□□□□□ -1.12
MCM4-201ENST00000262105 ROMO1P60602 79 aa8.01□□□□□ -1.13
MCM4-201ENST00000262105 KRTAP17-1Q9BYP8 105 aa7.99□□□□□ -1.13
MCM4-201ENST00000262105 KRTAP25-1Q3LHN0 102 aa7.9□□□□□ -1.15
MCM4-201ENST00000262105 FAT3Q8TDW7 4589 aa7.9□□□□□ -1.15
MCM4-201ENST00000262105 PKD1P98161 4303 aa7.89□□□□□ -1.15
MCM4-201ENST00000262105 PLAC4Q8WY50 150 aa7.87□□□□□ -1.15
MCM4-201ENST00000262105 NDUFAF8A1L188 74 aa7.79□□□□□ -1.16
MCM4-201ENST00000262105 KRTAP10-10P60014 251 aa7.77□□□□□ -1.17
MCM4-201ENST00000262105 KRTAP3-3Q9BYR6 98 aa7.76□□□□□ -1.17
MCM4-201ENST00000262105 KRTAP10-6P60371 365 aaPredicted RBP7.74□□□□□ -1.17
MCM4-201ENST00000262105 HSPG2P98160 4391 aa7.73□□□□□ -1.17
MCM4-201ENST00000262105 HERC2O95714 4834 aa7.72□□□□□ -1.17
MCM4-201ENST00000262105 KRTAP13-4Q3LI77 160 aa7.69□□□□□ -1.18
MCM4-201ENST00000262105 EPPK1P58107 5090 aaKnown RBP7.68□□□□□ -1.18
MCM4-201ENST00000262105 C10orf95Q9H7T3 257 aa7.67□□□□□ -1.18
MCM4-201ENST00000262105 KRTAP12-2P59991 146 aa7.63□□□□□ -1.19
MCM4-201ENST00000262105 KRTAP3-2Q9BYR7 98 aa7.61□□□□□ -1.19
MCM4-201ENST00000262105 KRTAP4-1Q9BYQ7 146 aa7.6□□□□□ -1.19
MCM4-201ENST00000262105 LRP2P98164 4655 aa7.59□□□□□ -1.19
MCM4-201ENST00000262105 KRTAP12-1P59990 96 aa7.54□□□□□ -1.2
MCM4-201ENST00000262105 LUZP6Q538Z0 58 aa7.53□□□□□ -1.2
MCM4-201ENST00000262105 BIRC6Q9NR09 4857 aa7.51□□□□□ -1.21
MCM4-201ENST00000262105 TNP1P09430 55 aa7.51□□□□□ -1.21
MCM4-201ENST00000262105 ABCA13Q86UQ4 5058 aa7.42□□□□□ -1.22
MCM4-201ENST00000262105 LORP23490 312 aaPredicted RBP7.38□□□□□ -1.23
MCM4-201ENST00000262105 LPAP08519 4548 aa7.37□□□□□ -1.23
MCM4-201ENST00000262105 PKHD1L1Q86WI1 4243 aa7.33□□□□□ -1.24
MCM4-201ENST00000262105 A0A0A0MQY5 61 aa7.32□□□□□ -1.24
MCM4-201ENST00000262105 TNXBP22105 4242 aa7.29□□□□□ -1.24
MCM4-201ENST00000262105 PP632Q6XCG6 107 aa7.19□□□□□ -1.26
MCM4-201ENST00000262105 PRO2289Q9P1D8 64 aa7.16□□□□□ -1.26
MCM4-201ENST00000262105 MT1HP80294 61 aa7.12□□□□□ -1.27
MCM4-201ENST00000262105 HERC1Q15751 4861 aa7.11□□□□□ -1.27
MCM4-201ENST00000262105 PCLOQ9Y6V0 5065 aa7.08□□□□□ -1.28
MCM4-201ENST00000262105 MT2AP02795 61 aa6.96□□□□□ -1.3
MCM4-201ENST00000262105 MUC2Q02817 5179 aa6.93□□□□□ -1.3
MCM4-201ENST00000262105 MT1FP04733 61 aa6.91□□□□□ -1.3
MCM4-201ENST00000262105 RNF213Q63HN8 5207 aa6.9□□□□□ -1.31
MCM4-201ENST00000262105 KRTAP15-1Q3LI76 137 aa6.88□□□□□ -1.31
MCM4-201ENST00000262105 LCE2CQ5TA81 110 aa6.83□□□□□ -1.32
MCM4-201ENST00000262105 UBR4Q5T4S7 5183 aa6.82□□□□□ -1.32
MCM4-201ENST00000262105 SPRR2GQ9BYE4 73 aa6.78□□□□□ -1.32
MCM4-201ENST00000262105 HMCN2Q8NDA2 5059 aa6.78□□□□□ -1.32
MCM4-201ENST00000262105 KRTAP19-2Q3LHN2 52 aa6.77□□□□□ -1.33
MCM4-201ENST00000262105 FAT4Q6V0I7 4981 aa6.73□□□□□ -1.33
MCM4-201ENST00000262105 KRTAP10-12P60413 245 aa6.71□□□□□ -1.34
MCM4-201ENST00000262105 MUC17Q685J3 4493 aa6.71□□□□□ -1.34
MCM4-201ENST00000262105 KRTAP19-1Q8IUB9 90 aa6.69□□□□□ -1.34
MCM4-201ENST00000262105 LCE3AQ5TA76 89 aa6.65□□□□□ -1.35
MCM4-201ENST00000262105 KRTAP9-8Q9BYQ0 159 aa6.64□□□□□ -1.35
MCM4-201ENST00000262105 FLGP20930 4061 aaPredicted RBP6.64□□□□□ -1.35
MCM4-201ENST00000262105 KRTAP12-3P60328 96 aa6.51□□□□□ -1.37
MCM4-201ENST00000262105 FSIP2Q5CZC0 6907 aa6.46□□□□□ -1.37
MCM4-201ENST00000262105 KRTAP19-8Q3LI54 63 aa6.45□□□□□ -1.38
MCM4-201ENST00000262105 MT1BP07438 61 aa6.41□□□□□ -1.38
MCM4-201ENST00000262105 KRTAP23-1A1A580 65 aa6.41□□□□□ -1.38
MCM4-201ENST00000262105 KRTAP9-3Q9BYQ3 159 aa6.4□□□□□ -1.38
MCM4-201ENST00000262105 MT1XP80297 61 aa6.32□□□□□ -1.4
MCM4-201ENST00000262105 KRTAP10-7P60409 375 aaPredicted RBP6.29□□□□□ -1.4
MCM4-201ENST00000262105 KRTAP10-5P60370 271 aa6.28□□□□□ -1.4
MCM4-201ENST00000262105 LCE2BO14633 110 aa6.25□□□□□ -1.41
MCM4-201ENST00000262105 KRTAP8-1Q8IUC2 63 aa6.25□□□□□ -1.41
MCM4-201ENST00000262105 CRCT1Q9UGL9 99 aa6.17□□□□□ -1.42
MCM4-201ENST00000262105 LCE2AQ5TA79 106 aaPredicted RBP6.17□□□□□ -1.42
MCM4-201ENST00000262105 KRTAP19-5Q3LI72 72 aa6.16□□□□□ -1.42
MCM4-201ENST00000262105 KRTAP4-8A0A0G2JLE6 195 aa6.1□□□□□ -1.43
MCM4-201ENST00000262105 KRTAP4-8Q9BYQ9 185 aa6.1□□□□□ -1.43
MCM4-201ENST00000262105 SPRR2FQ96RM1 72 aa5.97□□□□□ -1.45
MCM4-201ENST00000262105 USH2AO75445 5202 aa5.97□□□□□ -1.45
MCM4-201ENST00000262105 LCE3CQ5T5A8 94 aa5.85□□□□□ -1.47
MCM4-201ENST00000262105 INE1O15225 51 aa5.81□□□□□ -1.48
MCM4-201ENST00000262105 KRTAP19-6Q3LI70 58 aa5.72□□□□□ -1.49
MCM4-201ENST00000262105 KRTAP9-2Q9BYQ4 174 aa5.7□□□□□ -1.5
MCM4-201ENST00000262105 KRTAP4-7Q9BYR0 210 aa5.66□□□□□ -1.5
MCM4-201ENST00000262105 KMT2DO14686 5537 aa5.65□□□□□ -1.51
MCM4-201ENST00000262105 LCE2DQ5TA82 110 aaPredicted RBP5.59□□□□□ -1.51
MCM4-201ENST00000262105 MT1EP04732 61 aa5.58□□□□□ -1.52
MCM4-201ENST00000262105 SPRR5A0A1B0GTR4 108 aa5.57□□□□□ -1.52
MCM4-201ENST00000262105 MT1LQ93083 61 aa5.54□□□□□ -1.52
MCM4-201ENST00000262105 SPRR2EP22531 72 aa5.54□□□□□ -1.52
MCM4-201ENST00000262105 SPRR2BP35325 72 aa5.54□□□□□ -1.52
MCM4-201ENST00000262105 SPRR2AP35326 72 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms