RNA–Protein interactions for RNA: ENST00000261980.2

VSX2-201, Transcript of visual system homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX2, Length 2,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2-201ENST00000261980 DYNC1H1Q14204 4646 aaKnown RBP8.83□□□□□ -1
VSX2-201ENST00000261980 FAT1Q14517 4588 aa8.81□□□□□ -1
VSX2-201ENST00000261980 KRTAP13-4Q3LI77 160 aa8.76□□□□□ -1.01
VSX2-201ENST00000261980 RPL37P61927 97 aaKnown RBP8.72□□□□□ -1.01
VSX2-201ENST00000261980 APOBP04114 4563 aaKnown RBP8.69□□□□□ -1.02
VSX2-201ENST00000261980 SMR3BP02814 79 aaPredicted RBP8.69□□□□□ -1.02
VSX2-201ENST00000261980 C20orf166-AS1Q96NR2 134 aa8.67□□□□□ -1.02
VSX2-201ENST00000261980 KRTAP10-6P60371 365 aaPredicted RBP8.59□□□□□ -1.03
VSX2-201ENST00000261980 KRTAP17-1Q9BYP8 105 aa8.59□□□□□ -1.03
VSX2-201ENST00000261980 A0A1B0GVY2 172 aa8.58□□□□□ -1.04
VSX2-201ENST00000261980 MYCBP2O75592 4640 aa8.58□□□□□ -1.04
VSX2-201ENST00000261980 HSPG2P98160 4391 aa8.57□□□□□ -1.04
VSX2-201ENST00000261980 KRTAP15-1Q3LI76 137 aa8.57□□□□□ -1.04
VSX2-201ENST00000261980 RYR1P21817 5038 aa8.54□□□□□ -1.04
VSX2-201ENST00000261980 KRTAP12-2P59991 146 aa8.51□□□□□ -1.05
VSX2-201ENST00000261980 LRP1Q07954 4544 aaKnown RBP8.49□□□□□ -1.05
VSX2-201ENST00000261980 BIRC6Q9NR09 4857 aa8.48□□□□□ -1.05
VSX2-201ENST00000261980 S4R3F8 94 aa8.48□□□□□ -1.05
VSX2-201ENST00000261980 KRTAP3-3Q9BYR6 98 aa8.47□□□□□ -1.05
VSX2-201ENST00000261980 ABCA13Q86UQ4 5058 aa8.46□□□□□ -1.06
VSX2-201ENST00000261980 KRTAP3-2Q9BYR7 98 aa8.45□□□□□ -1.06
VSX2-201ENST00000261980 KRTAP4-5Q9BYR2 181 aa8.45□□□□□ -1.06
VSX2-201ENST00000261980 PCLOQ9Y6V0 5065 aa8.41□□□□□ -1.06
VSX2-201ENST00000261980 KRTAP10-8P60410 259 aa8.4□□□□□ -1.06
VSX2-201ENST00000261980 HERC2O95714 4834 aa8.37□□□□□ -1.07
VSX2-201ENST00000261980 A0A0A0MQY5 61 aa8.36□□□□□ -1.07
VSX2-201ENST00000261980 KRTAP10-4P60372 401 aaPredicted RBP8.32□□□□□ -1.08
VSX2-201ENST00000261980 KRTAP12-1P59990 96 aa8.29□□□□□ -1.08
VSX2-201ENST00000261980 Q5VSD8 79 aa8.28□□□□□ -1.08
VSX2-201ENST00000261980 LPAP08519 4548 aa8.26□□□□□ -1.09
VSX2-201ENST00000261980 RPS29P62273 56 aaKnown RBP8.26□□□□□ -1.09
VSX2-201ENST00000261980 HERC1Q15751 4861 aa8.24□□□□□ -1.09
VSX2-201ENST00000261980 FAT3Q8TDW7 4589 aa8.24□□□□□ -1.09
VSX2-201ENST00000261980 PKHD1L1Q86WI1 4243 aa8.18□□□□□ -1.1
VSX2-201ENST00000261980 XP32Q5T750 250 aa8.16□□□□□ -1.1
VSX2-201ENST00000261980 LUZP6Q538Z0 58 aa8.14□□□□□ -1.11
VSX2-201ENST00000261980 PLAC4Q8WY50 150 aa8.04□□□□□ -1.12
VSX2-201ENST00000261980 TNXBP22105 4242 aa8.01□□□□□ -1.13
VSX2-201ENST00000261980 M0QZ58 72 aa8.01□□□□□ -1.13
VSX2-201ENST00000261980 LRP2P98164 4655 aa8□□□□□ -1.13
VSX2-201ENST00000261980 R4GN34 69 aa7.91□□□□□ -1.14
VSX2-201ENST00000261980 MT1HL1P0DM35 61 aa7.89□□□□□ -1.15
VSX2-201ENST00000261980 J3QL48 77 aa7.88□□□□□ -1.15
VSX2-201ENST00000261980 UBR4Q5T4S7 5183 aa7.83□□□□□ -1.16
VSX2-201ENST00000261980 RNF213Q63HN8 5207 aa7.81□□□□□ -1.16
VSX2-201ENST00000261980 MUC2Q02817 5179 aa7.81□□□□□ -1.16
VSX2-201ENST00000261980 LORP23490 312 aaPredicted RBP7.81□□□□□ -1.16
VSX2-201ENST00000261980 HMCN2Q8NDA2 5059 aa7.7□□□□□ -1.18
VSX2-201ENST00000261980 CAMK2N1Q7Z7J9 78 aa7.65□□□□□ -1.18
VSX2-201ENST00000261980 FAT4Q6V0I7 4981 aa7.43□□□□□ -1.22
VSX2-201ENST00000261980 PP632Q6XCG6 107 aa7.37□□□□□ -1.23
VSX2-201ENST00000261980 SEC61BP60468 96 aaKnown RBP7.28□□□□□ -1.24
VSX2-201ENST00000261980 KRTAP4-1Q9BYQ7 146 aa7.26□□□□□ -1.25
VSX2-201ENST00000261980 TNP1P09430 55 aa7.22□□□□□ -1.25
VSX2-201ENST00000261980 MUC17Q685J3 4493 aa7.21□□□□□ -1.26
VSX2-201ENST00000261980 SPRR5A0A1B0GTR4 108 aa7.05□□□□□ -1.28
VSX2-201ENST00000261980 KRTAP19-2Q3LHN2 52 aa6.96□□□□□ -1.29
VSX2-201ENST00000261980 PRO2289Q9P1D8 64 aa6.93□□□□□ -1.3
VSX2-201ENST00000261980 LCE3AQ5TA76 89 aa6.9□□□□□ -1.3
VSX2-201ENST00000261980 FSIP2Q5CZC0 6907 aa6.9□□□□□ -1.3
VSX2-201ENST00000261980 FLGP20930 4061 aaPredicted RBP6.85□□□□□ -1.31
VSX2-201ENST00000261980 LCE2CQ5TA81 110 aa6.78□□□□□ -1.32
VSX2-201ENST00000261980 M0R2T5 61 aa6.74□□□□□ -1.33
VSX2-201ENST00000261980 KRTAP23-1A1A580 65 aa6.73□□□□□ -1.33
VSX2-201ENST00000261980 MT1HP80294 61 aa6.66□□□□□ -1.34
VSX2-201ENST00000261980 USH2AO75445 5202 aa6.63□□□□□ -1.35
VSX2-201ENST00000261980 INE1O15225 51 aa6.63□□□□□ -1.35
VSX2-201ENST00000261980 KRTAP19-1Q8IUB9 90 aa6.59□□□□□ -1.35
VSX2-201ENST00000261980 LCE2AQ5TA79 106 aaPredicted RBP6.52□□□□□ -1.37
VSX2-201ENST00000261980 KMT2DO14686 5537 aa6.48□□□□□ -1.37
VSX2-201ENST00000261980 SPRR2GQ9BYE4 73 aa6.47□□□□□ -1.37
VSX2-201ENST00000261980 KRTAP12-3P60328 96 aa6.46□□□□□ -1.37
VSX2-201ENST00000261980 KRTAP10-10P60014 251 aa6.46□□□□□ -1.38
VSX2-201ENST00000261980 MT2AP02795 61 aa6.43□□□□□ -1.38
VSX2-201ENST00000261980 MT1FP04733 61 aa6.43□□□□□ -1.38
VSX2-201ENST00000261980 KRTAP8-1Q8IUC2 63 aa6.43□□□□□ -1.38
VSX2-201ENST00000261980 KRTAP9-8Q9BYQ0 159 aa6.41□□□□□ -1.38
VSX2-201ENST00000261980 KRTAP10-12P60413 245 aa6.36□□□□□ -1.39
VSX2-201ENST00000261980 KRTAP10-7P60409 375 aaPredicted RBP6.3□□□□□ -1.4
VSX2-201ENST00000261980 KRTAP10-5P60370 271 aa6.27□□□□□ -1.41
VSX2-201ENST00000261980 MT1XP80297 61 aa6.26□□□□□ -1.41
VSX2-201ENST00000261980 SSPOA2VEC9 5147 aa6.2□□□□□ -1.42
VSX2-201ENST00000261980 KRTAP9-3Q9BYQ3 159 aa6.15□□□□□ -1.42
VSX2-201ENST00000261980 MT1BP07438 61 aa6.15□□□□□ -1.43
VSX2-201ENST00000261980 KRTAP9-2Q9BYQ4 174 aa6.13□□□□□ -1.43
VSX2-201ENST00000261980 LCE2BO14633 110 aa6.12□□□□□ -1.43
VSX2-201ENST00000261980 KRTAP19-5Q3LI72 72 aa6.09□□□□□ -1.44
VSX2-201ENST00000261980 KRTAP9-6A8MVA2 160 aa6.06□□□□□ -1.44
VSX2-201ENST00000261980 KRTAP19-8Q3LI54 63 aa6.06□□□□□ -1.44
VSX2-201ENST00000261980 LCE3CQ5T5A8 94 aa6.04□□□□□ -1.44
VSX2-201ENST00000261980 KRTAP4-7Q9BYR0 210 aa6.02□□□□□ -1.45
VSX2-201ENST00000261980 KRTAP4-8A0A0G2JLE6 195 aa5.95□□□□□ -1.46
VSX2-201ENST00000261980 KRTAP4-8Q9BYQ9 185 aa5.95□□□□□ -1.46
VSX2-201ENST00000261980 FCGBPQ9Y6R7 5405 aaPredicted RBP5.95□□□□□ -1.46
VSX2-201ENST00000261980 SYNE2Q8WXH0 6885 aaKnown RBP5.86□□□□□ -1.47
VSX2-201ENST00000261980 MACF1Q9UPN3 7388 aaKnown RBP5.84□□□□□ -1.47
VSX2-201ENST00000261980 LCE2DQ5TA82 110 aaPredicted RBP5.83□□□□□ -1.48
VSX2-201ENST00000261980 CRCT1Q9UGL9 99 aa5.8□□□□□ -1.48
VSX2-201ENST00000261980 KRTAP2-3P0C7H8 128 aa5.73□□□□□ -1.49
VSX2-201ENST00000261980 KRTAP2-4Q9BYR9 128 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms