RNA–Protein interactions for RNA: ENST00000261917.3

HCN4-201, Transcript of hyperpolarization activated cyclic nucleotide gated potassium channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCN4, Length 7,228 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCN4-201ENST00000261917 ZNF469Q96JG9 3925 aaPredicted RBP7.8□□□□□ -1.16
HCN4-201ENST00000261917 KRTAP8-1Q8IUC2 63 aa7.75□□□□□ -1.17
HCN4-201ENST00000261917 KRTAP10-5P60370 271 aa7.73□□□□□ -1.17
HCN4-201ENST00000261917 KRTAP10-4P60372 401 aaPredicted RBP7.7□□□□□ -1.18
HCN4-201ENST00000261917 INE1O15225 51 aa7.65□□□□□ -1.18
HCN4-201ENST00000261917 DNAH9Q9NYC9 4486 aa7.56□□□□□ -1.2
HCN4-201ENST00000261917 DNAH1Q9P2D7 4330 aa7.5□□□□□ -1.21
HCN4-201ENST00000261917 DNAH2Q9P225 4427 aa7.4□□□□□ -1.23
HCN4-201ENST00000261917 DNAH3Q8TD57 4116 aa7.34□□□□□ -1.23
HCN4-201ENST00000261917 KRTAP4-1Q9BYQ7 146 aa7.34□□□□□ -1.23
HCN4-201ENST00000261917 FRAS1Q86XX4 4008 aa7.34□□□□□ -1.23
HCN4-201ENST00000261917 DNAH10Q8IVF4 4471 aa7.34□□□□□ -1.23
HCN4-201ENST00000261917 MT1HP80294 61 aa7.34□□□□□ -1.24
HCN4-201ENST00000261917 ANK2Q01484 3957 aa7.3□□□□□ -1.24
HCN4-201ENST00000261917 SPRR2FQ96RM1 72 aa7.28□□□□□ -1.24
HCN4-201ENST00000261917 KMT2AQ03164 3969 aa7.26□□□□□ -1.25
HCN4-201ENST00000261917 KRTAP23-1A1A580 65 aa7.2□□□□□ -1.26
HCN4-201ENST00000261917 FAT2Q9NYQ8 4349 aa7.16□□□□□ -1.26
HCN4-201ENST00000261917 VPS13BQ7Z7G8 4022 aa7.14□□□□□ -1.27
HCN4-201ENST00000261917 KRTAP10-7P60409 375 aaPredicted RBP7.13□□□□□ -1.27
HCN4-201ENST00000261917 PLECQ15149 4684 aaKnown RBP7.1□□□□□ -1.27
HCN4-201ENST00000261917 DNAH5Q8TE73 4624 aa7.1□□□□□ -1.27
HCN4-201ENST00000261917 MT2AP02795 61 aa7.1□□□□□ -1.27
HCN4-201ENST00000261917 KRTAP19-5Q3LI72 72 aa7.07□□□□□ -1.28
HCN4-201ENST00000261917 CMYA5Q8N3K9 4069 aa7.06□□□□□ -1.28
HCN4-201ENST00000261917 DNAH7Q8WXX0 4024 aa7.05□□□□□ -1.28
HCN4-201ENST00000261917 DNAH8Q96JB1 4490 aa7.04□□□□□ -1.28
HCN4-201ENST00000261917 MT1FP04733 61 aa7□□□□□ -1.29
HCN4-201ENST00000261917 DNAH11Q96DT5 4516 aa7□□□□□ -1.29
HCN4-201ENST00000261917 LYSTQ99698 3801 aa6.98□□□□□ -1.29
HCN4-201ENST00000261917 PRKDCP78527 4128 aaKnown RBP6.96□□□□□ -1.3
HCN4-201ENST00000261917 STARD9Q9P2P6 4700 aa6.93□□□□□ -1.3
HCN4-201ENST00000261917 SPRR2EP22531 72 aa6.93□□□□□ -1.3
HCN4-201ENST00000261917 SPRR2BP35325 72 aa6.93□□□□□ -1.3
HCN4-201ENST00000261917 SPRR2AP35326 72 aa6.93□□□□□ -1.3
HCN4-201ENST00000261917 VPS13DQ5THJ4 4388 aa6.93□□□□□ -1.3
HCN4-201ENST00000261917 DNAH17Q9UFH2 4485 aa6.92□□□□□ -1.3
HCN4-201ENST00000261917 DYNC2H1Q8NCM8 4307 aaKnown RBP6.91□□□□□ -1.3
HCN4-201ENST00000261917 LRP1BQ9NZR2 4599 aa6.9□□□□□ -1.31
HCN4-201ENST00000261917 SPRR2GQ9BYE4 73 aa6.87□□□□□ -1.31
HCN4-201ENST00000261917 LCE3CQ5T5A8 94 aa6.81□□□□□ -1.32
HCN4-201ENST00000261917 DNAH6Q9C0G6 4158 aa6.79□□□□□ -1.32
HCN4-201ENST00000261917 LCE3BQ5TA77 95 aa6.73□□□□□ -1.33
HCN4-201ENST00000261917 FAT1Q14517 4588 aa6.71□□□□□ -1.34
HCN4-201ENST00000261917 SPRR2DP22532 72 aa6.68□□□□□ -1.34
HCN4-201ENST00000261917 SACSQ9NZJ4 4579 aa6.64□□□□□ -1.35
HCN4-201ENST00000261917 HECTD4Q9Y4D8 3996 aa6.61□□□□□ -1.35
HCN4-201ENST00000261917 MT1GP13640 62 aa6.58□□□□□ -1.36
HCN4-201ENST00000261917 DYNC1H1Q14204 4646 aaKnown RBP6.56□□□□□ -1.36
HCN4-201ENST00000261917 LCE2BO14633 110 aa6.54□□□□□ -1.36
HCN4-201ENST00000261917 KRTAP17-1Q9BYP8 105 aa6.46□□□□□ -1.38
HCN4-201ENST00000261917 APOBP04114 4563 aaKnown RBP6.45□□□□□ -1.38
HCN4-201ENST00000261917 KRTAP4-8A0A0G2JLE6 195 aa6.4□□□□□ -1.38
HCN4-201ENST00000261917 KRTAP4-8Q9BYQ9 185 aa6.4□□□□□ -1.38
HCN4-201ENST00000261917 DNHD1Q96M86 4753 aa6.39□□□□□ -1.39
HCN4-201ENST00000261917 FAT3Q8TDW7 4589 aa6.36□□□□□ -1.39
HCN4-201ENST00000261917 LPAP08519 4548 aa6.35□□□□□ -1.39
HCN4-201ENST00000261917 KRTAP12-4P60329 112 aa6.33□□□□□ -1.4
HCN4-201ENST00000261917 MT1XP80297 61 aa6.32□□□□□ -1.4
HCN4-201ENST00000261917 KRTAP19-1Q8IUB9 90 aa6.32□□□□□ -1.4
HCN4-201ENST00000261917 RYR1P21817 5038 aa6.3□□□□□ -1.4
HCN4-201ENST00000261917 HSPG2P98160 4391 aa6.27□□□□□ -1.41
HCN4-201ENST00000261917 PKD1P98161 4303 aa6.27□□□□□ -1.41
HCN4-201ENST00000261917 KRTAP19-8Q3LI54 63 aa6.22□□□□□ -1.41
HCN4-201ENST00000261917 PKHD1L1Q86WI1 4243 aa6.21□□□□□ -1.42
HCN4-201ENST00000261917 KRTAP9-8Q9BYQ0 159 aa6.17□□□□□ -1.42
HCN4-201ENST00000261917 MT1BP07438 61 aa6.17□□□□□ -1.42
HCN4-201ENST00000261917 LCE2CQ5TA81 110 aa6.16□□□□□ -1.42
HCN4-201ENST00000261917 PKHD1P08F94 4074 aa6.16□□□□□ -1.42
HCN4-201ENST00000261917 LRP1Q07954 4544 aaKnown RBP6.16□□□□□ -1.42
HCN4-201ENST00000261917 MYCBP2O75592 4640 aa6.16□□□□□ -1.42
HCN4-201ENST00000261917 MT4P47944 62 aa6.11□□□□□ -1.43
HCN4-201ENST00000261917 LCE2DQ5TA82 110 aaPredicted RBP6.11□□□□□ -1.43
HCN4-201ENST00000261917 KRTAP4-7Q9BYR0 210 aa6.05□□□□□ -1.44
HCN4-201ENST00000261917 LCE3DQ9BYE3 92 aa6.05□□□□□ -1.44
HCN4-201ENST00000261917 KRTAP9-3Q9BYQ3 159 aa6.03□□□□□ -1.44
HCN4-201ENST00000261917 TNXBP22105 4242 aa6.01□□□□□ -1.45
HCN4-201ENST00000261917 RYR3Q15413 4870 aa6□□□□□ -1.45
HCN4-201ENST00000261917 KRTAP19-4Q3LI73 84 aa5.99□□□□□ -1.45
HCN4-201ENST00000261917 FLGP20930 4061 aaPredicted RBP5.88□□□□□ -1.47
HCN4-201ENST00000261917 KRTAP19-3Q7Z4W3 81 aa5.87□□□□□ -1.47
HCN4-201ENST00000261917 SPRR5A0A1B0GTR4 108 aa5.86□□□□□ -1.47
HCN4-201ENST00000261917 LCE3EQ5T5B0 92 aa5.86□□□□□ -1.47
HCN4-201ENST00000261917 LOC100996750A0A140TA64 210 aa5.82□□□□□ -1.48
HCN4-201ENST00000261917 KRTAP9-2Q9BYQ4 174 aa5.81□□□□□ -1.48
HCN4-201ENST00000261917 LCE1BQ5T7P3 118 aa5.79□□□□□ -1.48
HCN4-201ENST00000261917 MT1LQ93083 61 aa5.74□□□□□ -1.49
HCN4-201ENST00000261917 KRTAP4-3Q9BYR4 195 aa5.72□□□□□ -1.49
HCN4-201ENST00000261917 LCE1DQ5T752 114 aa5.72□□□□□ -1.49
HCN4-201ENST00000261917 HYDINQ4G0P3 5121 aa5.71□□□□□ -1.5
HCN4-201ENST00000261917 MT1EP04732 61 aa5.69□□□□□ -1.5
HCN4-201ENST00000261917 LRP2P98164 4655 aa5.68□□□□□ -1.5
HCN4-201ENST00000261917 PRM1P04553 51 aa5.61□□□□□ -1.51
HCN4-201ENST00000261917 MT1MQ8N339 61 aa5.58□□□□□ -1.52
HCN4-201ENST00000261917 MT3P25713 68 aa5.55□□□□□ -1.52
HCN4-201ENST00000261917 MUC17Q685J3 4493 aa5.53□□□□□ -1.52
HCN4-201ENST00000261917 KRTAP19-6Q3LI70 58 aa5.49□□□□□ -1.53
HCN4-201ENST00000261917 KRTAP9-6A0A140TA67 174 aa5.48□□□□□ -1.53
HCN4-201ENST00000261917 LCE5AQ5TCM9 118 aa5.45□□□□□ -1.54
HCN4-201ENST00000261917 KRTAP4-9Q9BYQ8 210 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms