RNA–Protein interactions for RNA: ENST00000261875.9

HACD3-201, Transcript of 3-hydroxyacyl-CoA dehydratase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HACD3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3-201ENST00000261875 SEC61GP60059 68 aa6.83□□□□□ -1.32
HACD3-201ENST00000261875 CDC42SE1Q9NRR8 79 aa6.82□□□□□ -1.32
HACD3-201ENST00000261875 COX6B2Q6YFQ2 88 aa6.82□□□□□ -1.32
HACD3-201ENST00000261875 MIR22HGQ0VDD5 57 aa6.77□□□□□ -1.33
HACD3-201ENST00000261875 MUC2Q02817 5179 aa6.77□□□□□ -1.33
HACD3-201ENST00000261875 SPATA8Q6RVD6 105 aa6.76□□□□□ -1.33
HACD3-201ENST00000261875 UQCR11O14957 56 aa6.75□□□□□ -1.33
HACD3-201ENST00000261875 HERC1Q15751 4861 aa6.73□□□□□ -1.33
HACD3-201ENST00000261875 A0A0D9SG42 100 aa6.67□□□□□ -1.34
HACD3-201ENST00000261875 S4R3F8 94 aa6.67□□□□□ -1.34
HACD3-201ENST00000261875 A0A1B0GU33 70 aa6.66□□□□□ -1.34
HACD3-201ENST00000261875 BIRC6Q9NR09 4857 aa6.65□□□□□ -1.34
HACD3-201ENST00000261875 PCLOQ9Y6V0 5065 aa6.65□□□□□ -1.35
HACD3-201ENST00000261875 TPRXLQ17RH7 258 aa6.64□□□□□ -1.35
HACD3-201ENST00000261875 ADM2Q7Z4H4 148 aa6.64□□□□□ -1.35
HACD3-201ENST00000261875 H0YAA0 97 aa6.64□□□□□ -1.35
HACD3-201ENST00000261875 PRAC1Q96KF2 57 aa6.64□□□□□ -1.35
HACD3-201ENST00000261875 A6NN06 94 aa6.62□□□□□ -1.35
HACD3-201ENST00000261875 KRTAP3-3Q9BYR6 98 aa6.62□□□□□ -1.35
HACD3-201ENST00000261875 H1FX-AS1Q4G0G2 97 aa6.59□□□□□ -1.35
HACD3-201ENST00000261875 P0C880 135 aa6.58□□□□□ -1.36
HACD3-201ENST00000261875 RBM12B-AS1Q9P1G2 102 aa6.58□□□□□ -1.36
HACD3-201ENST00000261875 KRTAP4-1Q9BYQ7 146 aa6.54□□□□□ -1.36
HACD3-201ENST00000261875 KTN1-AS1Q86SY8 53 aa6.54□□□□□ -1.36
HACD3-201ENST00000261875 CRIPTQ9P021 101 aa6.52□□□□□ -1.37
HACD3-201ENST00000261875 KRTAP13-4Q3LI77 160 aa6.52□□□□□ -1.37
HACD3-201ENST00000261875 KRTAP10-6P60371 365 aaPredicted RBP6.49□□□□□ -1.37
HACD3-201ENST00000261875 LINC01554Q52M75 96 aa6.49□□□□□ -1.37
HACD3-201ENST00000261875 SEC61BP60468 96 aaKnown RBP6.48□□□□□ -1.37
HACD3-201ENST00000261875 RNF213Q63HN8 5207 aa6.48□□□□□ -1.37
HACD3-201ENST00000261875 FAT4Q6V0I7 4981 aa6.47□□□□□ -1.37
HACD3-201ENST00000261875 CSAG1Q6PB30 78 aa6.46□□□□□ -1.38
HACD3-201ENST00000261875 KRTAP3-2Q9BYR7 98 aa6.45□□□□□ -1.38
HACD3-201ENST00000261875 MUC17Q685J3 4493 aa6.41□□□□□ -1.38
HACD3-201ENST00000261875 SPINT4Q6UDR6 99 aa6.41□□□□□ -1.38
HACD3-201ENST00000261875 UBR4Q5T4S7 5183 aa6.38□□□□□ -1.39
HACD3-201ENST00000261875 K7ERS5 55 aa6.35□□□□□ -1.39
HACD3-201ENST00000261875 HMCN2Q8NDA2 5059 aa6.35□□□□□ -1.39
HACD3-201ENST00000261875 M0QZ58 72 aa6.31□□□□□ -1.4
HACD3-201ENST00000261875 LORP23490 312 aaPredicted RBP6.3□□□□□ -1.4
HACD3-201ENST00000261875 KRTAP12-2P59991 146 aa6.28□□□□□ -1.4
HACD3-201ENST00000261875 R4GN34 69 aa6.27□□□□□ -1.41
HACD3-201ENST00000261875 C10orf95Q9H7T3 257 aa6.2□□□□□ -1.42
HACD3-201ENST00000261875 M0R2T5 61 aa6.17□□□□□ -1.42
HACD3-201ENST00000261875 KRTAP12-1P59990 96 aa6.16□□□□□ -1.42
HACD3-201ENST00000261875 KRTAP19-2Q3LHN2 52 aa6.14□□□□□ -1.43
HACD3-201ENST00000261875 ROMO1P60602 79 aa6.13□□□□□ -1.43
HACD3-201ENST00000261875 FLGP20930 4061 aaPredicted RBP6.11□□□□□ -1.43
HACD3-201ENST00000261875 KRTAP25-1Q3LHN0 102 aa6.06□□□□□ -1.44
HACD3-201ENST00000261875 CAMK2N1Q7Z7J9 78 aa5.99□□□□□ -1.45
HACD3-201ENST00000261875 LCE2CQ5TA81 110 aa5.96□□□□□ -1.46
HACD3-201ENST00000261875 MT1HP80294 61 aa5.88□□□□□ -1.47
HACD3-201ENST00000261875 KRTAP10-10P60014 251 aa5.87□□□□□ -1.47
HACD3-201ENST00000261875 MT1FP04733 61 aa5.77□□□□□ -1.49
HACD3-201ENST00000261875 MT2AP02795 61 aa5.74□□□□□ -1.49
HACD3-201ENST00000261875 USH2AO75445 5202 aa5.73□□□□□ -1.49
HACD3-201ENST00000261875 KRTAP19-1Q8IUB9 90 aa5.7□□□□□ -1.5
HACD3-201ENST00000261875 PLAC4Q8WY50 150 aa5.69□□□□□ -1.5
HACD3-201ENST00000261875 H3BS24 57 aa5.67□□□□□ -1.5
HACD3-201ENST00000261875 KRTAP9-8Q9BYQ0 159 aa5.66□□□□□ -1.5
HACD3-201ENST00000261875 FSIP2Q5CZC0 6907 aa5.62□□□□□ -1.51
HACD3-201ENST00000261875 SPRR2GQ9BYE4 73 aa5.58□□□□□ -1.52
HACD3-201ENST00000261875 TNP1P09430 55 aa5.56□□□□□ -1.52
HACD3-201ENST00000261875 KMT2DO14686 5537 aa5.47□□□□□ -1.53
HACD3-201ENST00000261875 LCE2DQ5TA82 110 aaPredicted RBP5.45□□□□□ -1.54
HACD3-201ENST00000261875 NDUFAF8A1L188 74 aa5.44□□□□□ -1.54
HACD3-201ENST00000261875 MT1BP07438 61 aa5.44□□□□□ -1.54
HACD3-201ENST00000261875 KRTAP9-3Q9BYQ3 159 aa5.41□□□□□ -1.54
HACD3-201ENST00000261875 KRTAP15-1Q3LI76 137 aa5.4□□□□□ -1.54
HACD3-201ENST00000261875 LCE3AQ5TA76 89 aa5.39□□□□□ -1.55
HACD3-201ENST00000261875 LCE2BO14633 110 aa5.35□□□□□ -1.55
HACD3-201ENST00000261875 MT1XP80297 61 aa5.35□□□□□ -1.55
HACD3-201ENST00000261875 KRTAP19-8Q3LI54 63 aa5.34□□□□□ -1.56
HACD3-201ENST00000261875 KRTAP10-5P60370 271 aa5.33□□□□□ -1.56
HACD3-201ENST00000261875 PP632Q6XCG6 107 aa5.33□□□□□ -1.56
HACD3-201ENST00000261875 KRTAP10-7P60409 375 aaPredicted RBP5.3□□□□□ -1.56
HACD3-201ENST00000261875 LCE2AQ5TA79 106 aaPredicted RBP5.29□□□□□ -1.56
HACD3-201ENST00000261875 KRTAP10-12P60413 245 aa5.22□□□□□ -1.57
HACD3-201ENST00000261875 PRO2289Q9P1D8 64 aa5.15□□□□□ -1.58
HACD3-201ENST00000261875 SSPOA2VEC9 5147 aa5.15□□□□□ -1.59
HACD3-201ENST00000261875 KRTAP4-8A0A0G2JLE6 195 aa5.15□□□□□ -1.59
HACD3-201ENST00000261875 KRTAP4-8Q9BYQ9 185 aa5.15□□□□□ -1.59
HACD3-201ENST00000261875 LUZP6Q538Z0 58 aa5.14□□□□□ -1.59
HACD3-201ENST00000261875 KRTAP12-3P60328 96 aa5.08□□□□□ -1.6
HACD3-201ENST00000261875 KRTAP23-1A1A580 65 aa5.02□□□□□ -1.61
HACD3-201ENST00000261875 KRTAP8-1Q8IUC2 63 aa5.02□□□□□ -1.61
HACD3-201ENST00000261875 KRTAP19-5Q3LI72 72 aa5.01□□□□□ -1.61
HACD3-201ENST00000261875 MUC12Q9UKN1 5478 aa4.91□□□□□ -1.62
HACD3-201ENST00000261875 FCGBPQ9Y6R7 5405 aaPredicted RBP4.89□□□□□ -1.63
HACD3-201ENST00000261875 KRTAP4-7Q9BYR0 210 aa4.86□□□□□ -1.63
HACD3-201ENST00000261875 DSTQ03001 7570 aaKnown RBP4.85□□□□□ -1.63
HACD3-201ENST00000261875 SPRR5A0A1B0GTR4 108 aa4.82□□□□□ -1.64
HACD3-201ENST00000261875 KRTAP19-7Q3SYF9 63 aa4.76□□□□□ -1.65
HACD3-201ENST00000261875 MACF1Q9UPN3 7388 aaKnown RBP4.73□□□□□ -1.65
HACD3-201ENST00000261875 LCE3CQ5T5A8 94 aa4.7□□□□□ -1.66
HACD3-201ENST00000261875 SYNE2Q8WXH0 6885 aaKnown RBP4.69□□□□□ -1.66
HACD3-201ENST00000261875 KRTAP19-6Q3LI70 58 aa4.69□□□□□ -1.66
HACD3-201ENST00000261875 CRCT1Q9UGL9 99 aa4.64□□□□□ -1.67
HACD3-201ENST00000261875 MT1EP04732 61 aa4.63□□□□□ -1.67
HACD3-201ENST00000261875 KRTAP4-3Q9BYR4 195 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms