RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 DNAH1Q9P2D7 4330 aa6.19□□□□□ -1.42
CDH1-201ENST00000261769 KRTAP15-1Q3LI76 137 aa6.17□□□□□ -1.42
CDH1-201ENST00000261769 DNAH10Q8IVF4 4471 aa6.17□□□□□ -1.42
CDH1-201ENST00000261769 KRTAP10-12P60413 245 aa6.13□□□□□ -1.43
CDH1-201ENST00000261769 CSMD3Q7Z407 3707 aa6.07□□□□□ -1.44
CDH1-201ENST00000261769 DYNC1H1Q14204 4646 aaKnown RBP6.03□□□□□ -1.44
CDH1-201ENST00000261769 VPS13DQ5THJ4 4388 aa6.03□□□□□ -1.44
CDH1-201ENST00000261769 RYR1P21817 5038 aa5.98□□□□□ -1.45
CDH1-201ENST00000261769 KRTAP4-1Q9BYQ7 146 aa5.98□□□□□ -1.45
CDH1-201ENST00000261769 MT1HP80294 61 aa5.97□□□□□ -1.45
CDH1-201ENST00000261769 DNAH17Q9UFH2 4485 aa5.93□□□□□ -1.46
CDH1-201ENST00000261769 LRP1BQ9NZR2 4599 aa5.92□□□□□ -1.46
CDH1-201ENST00000261769 LORP23490 312 aaPredicted RBP5.9□□□□□ -1.46
CDH1-201ENST00000261769 KRTAP12-3P60328 96 aa5.89□□□□□ -1.47
CDH1-201ENST00000261769 FAT1Q14517 4588 aa5.88□□□□□ -1.47
CDH1-201ENST00000261769 KRTAP23-1A1A580 65 aa5.87□□□□□ -1.47
CDH1-201ENST00000261769 STARD9Q9P2P6 4700 aa5.85□□□□□ -1.47
CDH1-201ENST00000261769 KRTAP8-1Q8IUC2 63 aa5.85□□□□□ -1.47
CDH1-201ENST00000261769 MT2AP02795 61 aa5.84□□□□□ -1.47
CDH1-201ENST00000261769 DNAH2Q9P225 4427 aa5.83□□□□□ -1.48
CDH1-201ENST00000261769 PRKDCP78527 4128 aaKnown RBP5.83□□□□□ -1.48
CDH1-201ENST00000261769 KIAA1109Q2LD37 5005 aa5.81□□□□□ -1.48
CDH1-201ENST00000261769 FAT2Q9NYQ8 4349 aa5.81□□□□□ -1.48
CDH1-201ENST00000261769 SACSQ9NZJ4 4579 aa5.8□□□□□ -1.48
CDH1-201ENST00000261769 CRCT1Q9UGL9 99 aa5.79□□□□□ -1.48
CDH1-201ENST00000261769 DYNC2H1Q8NCM8 4307 aaKnown RBP5.79□□□□□ -1.48
CDH1-201ENST00000261769 ANK2Q01484 3957 aa5.77□□□□□ -1.48
CDH1-201ENST00000261769 LCE3AQ5TA76 89 aa5.77□□□□□ -1.49
CDH1-201ENST00000261769 SPRR2GQ9BYE4 73 aa5.74□□□□□ -1.49
CDH1-201ENST00000261769 RYR3Q15413 4870 aa5.74□□□□□ -1.49
CDH1-201ENST00000261769 MT1FP04733 61 aa5.69□□□□□ -1.5
CDH1-201ENST00000261769 KRTAP17-1Q9BYP8 105 aa5.65□□□□□ -1.51
CDH1-201ENST00000261769 BIRC6Q9NR09 4857 aa5.62□□□□□ -1.51
CDH1-201ENST00000261769 RYR2Q92736 4967 aa5.62□□□□□ -1.51
CDH1-201ENST00000261769 DNAH8Q96JB1 4490 aa5.59□□□□□ -1.51
CDH1-201ENST00000261769 DNAH3Q8TD57 4116 aa5.59□□□□□ -1.52
CDH1-201ENST00000261769 APOBP04114 4563 aaKnown RBP5.58□□□□□ -1.52
CDH1-201ENST00000261769 HERC2O95714 4834 aa5.54□□□□□ -1.52
CDH1-201ENST00000261769 INE1O15225 51 aa5.53□□□□□ -1.52
CDH1-201ENST00000261769 SPRR2FQ96RM1 72 aa5.49□□□□□ -1.53
CDH1-201ENST00000261769 KMT2AQ03164 3969 aa5.48□□□□□ -1.53
CDH1-201ENST00000261769 VPS13BQ7Z7G8 4022 aa5.48□□□□□ -1.53
CDH1-201ENST00000261769 DNAH6Q9C0G6 4158 aa5.48□□□□□ -1.53
CDH1-201ENST00000261769 FAT3Q8TDW7 4589 aa5.46□□□□□ -1.54
CDH1-201ENST00000261769 LYSTQ99698 3801 aa5.42□□□□□ -1.54
CDH1-201ENST00000261769 KRTAP19-8Q3LI54 63 aa5.41□□□□□ -1.54
CDH1-201ENST00000261769 MYCBP2O75592 4640 aa5.38□□□□□ -1.55
CDH1-201ENST00000261769 KRTAP10-7P60409 375 aaPredicted RBP5.35□□□□□ -1.55
CDH1-201ENST00000261769 KRTAP19-1Q8IUB9 90 aa5.35□□□□□ -1.55
CDH1-201ENST00000261769 CMYA5Q8N3K9 4069 aa5.35□□□□□ -1.55
CDH1-201ENST00000261769 LRP1Q07954 4544 aaKnown RBP5.35□□□□□ -1.55
CDH1-201ENST00000261769 KRTAP19-4Q3LI73 84 aa5.34□□□□□ -1.55
CDH1-201ENST00000261769 PCLOQ9Y6V0 5065 aa5.34□□□□□ -1.55
CDH1-201ENST00000261769 HERC1Q15751 4861 aa5.31□□□□□ -1.56
CDH1-201ENST00000261769 FRAS1Q86XX4 4008 aa5.31□□□□□ -1.56
CDH1-201ENST00000261769 KRTAP19-5Q3LI72 72 aa5.3□□□□□ -1.56
CDH1-201ENST00000261769 KRTAP10-5P60370 271 aa5.29□□□□□ -1.56
CDH1-201ENST00000261769 KRTAP9-8Q9BYQ0 159 aa5.29□□□□□ -1.56
CDH1-201ENST00000261769 LCE2CQ5TA81 110 aa5.26□□□□□ -1.57
CDH1-201ENST00000261769 DNAH7Q8WXX0 4024 aa5.26□□□□□ -1.57
CDH1-201ENST00000261769 HECTD4Q9Y4D8 3996 aa5.24□□□□□ -1.57
CDH1-201ENST00000261769 HYDINQ4G0P3 5121 aa5.22□□□□□ -1.57
CDH1-201ENST00000261769 HSPG2P98160 4391 aa5.22□□□□□ -1.57
CDH1-201ENST00000261769 PKD1P98161 4303 aa5.22□□□□□ -1.57
CDH1-201ENST00000261769 SPRR2EP22531 72 aa5.19□□□□□ -1.58
CDH1-201ENST00000261769 SPRR2BP35325 72 aa5.19□□□□□ -1.58
CDH1-201ENST00000261769 SPRR2AP35326 72 aa5.19□□□□□ -1.58
CDH1-201ENST00000261769 MT1BP07438 61 aa5.19□□□□□ -1.58
CDH1-201ENST00000261769 KRTAP9-3Q9BYQ3 159 aa5.18□□□□□ -1.58
CDH1-201ENST00000261769 MT1XP80297 61 aa5.14□□□□□ -1.59
CDH1-201ENST00000261769 LCE3CQ5T5A8 94 aa5.14□□□□□ -1.59
CDH1-201ENST00000261769 LRP2P98164 4655 aa5.13□□□□□ -1.59
CDH1-201ENST00000261769 PKHD1L1Q86WI1 4243 aa5.13□□□□□ -1.59
CDH1-201ENST00000261769 KMT2CQ8NEZ4 4911 aaKnown RBP5.05□□□□□ -1.6
CDH1-201ENST00000261769 EPPK1P58107 5090 aaKnown RBP5.05□□□□□ -1.6
CDH1-201ENST00000261769 SPRR2DP22532 72 aa5.03□□□□□ -1.6
CDH1-201ENST00000261769 KRTAP19-2Q3LHN2 52 aa5.02□□□□□ -1.61
CDH1-201ENST00000261769 LCE2BO14633 110 aa5.01□□□□□ -1.61
CDH1-201ENST00000261769 PKHD1P08F94 4074 aa5.01□□□□□ -1.61
CDH1-201ENST00000261769 ABCA13Q86UQ4 5058 aa5□□□□□ -1.61
CDH1-201ENST00000261769 MT1GP13640 62 aa4.96□□□□□ -1.61
CDH1-201ENST00000261769 KRTAP9-2Q9BYQ4 174 aa4.94□□□□□ -1.62
CDH1-201ENST00000261769 KRTAP4-8A0A0G2JLE6 195 aa4.9□□□□□ -1.62
CDH1-201ENST00000261769 KRTAP4-8Q9BYQ9 185 aa4.9□□□□□ -1.62
CDH1-201ENST00000261769 KRTAP12-4P60329 112 aa4.87□□□□□ -1.63
CDH1-201ENST00000261769 LCE2DQ5TA82 110 aaPredicted RBP4.85□□□□□ -1.63
CDH1-201ENST00000261769 LCE2AQ5TA79 106 aaPredicted RBP4.85□□□□□ -1.63
CDH1-201ENST00000261769 UBR4Q5T4S7 5183 aa4.84□□□□□ -1.63
CDH1-201ENST00000261769 KRTAP19-6Q3LI70 58 aa4.84□□□□□ -1.64
CDH1-201ENST00000261769 MUC17Q685J3 4493 aa4.81□□□□□ -1.64
CDH1-201ENST00000261769 LPAP08519 4548 aa4.8□□□□□ -1.64
CDH1-201ENST00000261769 KRTAP19-3Q7Z4W3 81 aa4.78□□□□□ -1.64
CDH1-201ENST00000261769 KRTAP9-6A0A140TA67 174 aa4.74□□□□□ -1.65
CDH1-201ENST00000261769 FLGP20930 4061 aaPredicted RBP4.72□□□□□ -1.65
CDH1-201ENST00000261769 RNF213Q63HN8 5207 aa4.72□□□□□ -1.65
CDH1-201ENST00000261769 TNXBP22105 4242 aa4.71□□□□□ -1.66
CDH1-201ENST00000261769 FAT4Q6V0I7 4981 aa4.7□□□□□ -1.66
CDH1-201ENST00000261769 LCE3BQ5TA77 95 aa4.69□□□□□ -1.66
CDH1-201ENST00000261769 MT1EP04732 61 aa4.67□□□□□ -1.66
CDH1-201ENST00000261769 MT1LQ93083 61 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms