RNA–Protein interactions for RNA: ENST00000261367.11

SNCAIP-201, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-201ENST00000261367 DNAH5Q8TE73 4624 aa4.47□□□□□ -1.69
SNCAIP-201ENST00000261367 HYDINQ4G0P3 5121 aa4.47□□□□□ -1.69
SNCAIP-201ENST00000261367 FAT2Q9NYQ8 4349 aa4.46□□□□□ -1.7
SNCAIP-201ENST00000261367 KRTAP10-1P60331 282 aa4.44□□□□□ -1.7
SNCAIP-201ENST00000261367 KRTAP10-2P60368 255 aa4.38□□□□□ -1.71
SNCAIP-201ENST00000261367 KRTAP15-1Q3LI76 137 aa4.36□□□□□ -1.71
SNCAIP-201ENST00000261367 LRP1BQ9NZR2 4599 aa4.36□□□□□ -1.71
SNCAIP-201ENST00000261367 PKHD1P08F94 4074 aa4.36□□□□□ -1.71
SNCAIP-201ENST00000261367 TPRXLQ17RH7 258 aa4.34□□□□□ -1.71
SNCAIP-201ENST00000261367 VPS13BQ7Z7G8 4022 aa4.34□□□□□ -1.72
SNCAIP-201ENST00000261367 INE1O15225 51 aa4.31□□□□□ -1.72
SNCAIP-201ENST00000261367 KRTAP1-4P0C5Y4 121 aa4.29□□□□□ -1.72
SNCAIP-201ENST00000261367 SACSQ9NZJ4 4579 aa4.28□□□□□ -1.72
SNCAIP-201ENST00000261367 KRTAP10-8P60410 259 aa4.27□□□□□ -1.73
SNCAIP-201ENST00000261367 KRTAP13-4Q3LI77 160 aa4.24□□□□□ -1.73
SNCAIP-201ENST00000261367 KRTAP12-2P59991 146 aa4.22□□□□□ -1.73
SNCAIP-201ENST00000261367 PRO2289Q9P1D8 64 aa4.22□□□□□ -1.73
SNCAIP-201ENST00000261367 KRTAP12-1P59990 96 aa4.21□□□□□ -1.74
SNCAIP-201ENST00000261367 XP32Q5T750 250 aa4.2□□□□□ -1.74
SNCAIP-201ENST00000261367 PKHD1L1Q86WI1 4243 aa4.2□□□□□ -1.74
SNCAIP-201ENST00000261367 APOBP04114 4563 aaKnown RBP4.15□□□□□ -1.74
SNCAIP-201ENST00000261367 KMT2CQ8NEZ4 4911 aaKnown RBP4.15□□□□□ -1.75
SNCAIP-201ENST00000261367 FAT1Q14517 4588 aa4.15□□□□□ -1.75
SNCAIP-201ENST00000261367 DYNC1H1Q14204 4646 aaKnown RBP4.14□□□□□ -1.75
SNCAIP-201ENST00000261367 RYR2Q92736 4967 aa4.11□□□□□ -1.75
SNCAIP-201ENST00000261367 KRTAP3-1Q9BYR8 98 aa4.11□□□□□ -1.75
SNCAIP-201ENST00000261367 KRTAP10-6P60371 365 aaPredicted RBP4.1□□□□□ -1.75
SNCAIP-201ENST00000261367 MYCBP2O75592 4640 aa4.09□□□□□ -1.75
SNCAIP-201ENST00000261367 KRTAP23-1A1A580 65 aa4.07□□□□□ -1.76
SNCAIP-201ENST00000261367 TNXBP22105 4242 aa4.06□□□□□ -1.76
SNCAIP-201ENST00000261367 RYR3Q15413 4870 aa4.04□□□□□ -1.76
SNCAIP-201ENST00000261367 LRP1Q07954 4544 aaKnown RBP4.03□□□□□ -1.76
SNCAIP-201ENST00000261367 HSPG2P98160 4391 aa4□□□□□ -1.77
SNCAIP-201ENST00000261367 FAT3Q8TDW7 4589 aa3.98□□□□□ -1.77
SNCAIP-201ENST00000261367 KRTAP3-2Q9BYR7 98 aa3.95□□□□□ -1.78
SNCAIP-201ENST00000261367 KRTAP10-4P60372 401 aaPredicted RBP3.94□□□□□ -1.78
SNCAIP-201ENST00000261367 KRTAP17-1Q9BYP8 105 aa3.9□□□□□ -1.79
SNCAIP-201ENST00000261367 LPAP08519 4548 aa3.89□□□□□ -1.79
SNCAIP-201ENST00000261367 KRTAP10-10P60014 251 aa3.89□□□□□ -1.79
SNCAIP-201ENST00000261367 A0A1B0GVY2 172 aa3.87□□□□□ -1.79
SNCAIP-201ENST00000261367 RYR1P21817 5038 aa3.87□□□□□ -1.79
SNCAIP-201ENST00000261367 KRTAP3-3Q9BYR6 98 aa3.87□□□□□ -1.79
SNCAIP-201ENST00000261367 EPPK1P58107 5090 aaKnown RBP3.86□□□□□ -1.79
SNCAIP-201ENST00000261367 KIAA1109Q2LD37 5005 aa3.85□□□□□ -1.79
SNCAIP-201ENST00000261367 LRP2P98164 4655 aa3.82□□□□□ -1.8
SNCAIP-201ENST00000261367 ABCA13Q86UQ4 5058 aa3.81□□□□□ -1.8
SNCAIP-201ENST00000261367 MUC2Q02817 5179 aa3.75□□□□□ -1.81
SNCAIP-201ENST00000261367 MUC17Q685J3 4493 aa3.66□□□□□ -1.82
SNCAIP-201ENST00000261367 MT1HL1P0DM35 61 aa3.61□□□□□ -1.83
SNCAIP-201ENST00000261367 LORP23490 312 aaPredicted RBP3.58□□□□□ -1.84
SNCAIP-201ENST00000261367 KRTAP12-3P60328 96 aa3.57□□□□□ -1.84
SNCAIP-201ENST00000261367 KRTAP10-12P60413 245 aa3.57□□□□□ -1.84
SNCAIP-201ENST00000261367 KRTAP4-5Q9BYR2 181 aa3.54□□□□□ -1.84
SNCAIP-201ENST00000261367 FAT4Q6V0I7 4981 aa3.53□□□□□ -1.85
SNCAIP-201ENST00000261367 HERC2O95714 4834 aa3.52□□□□□ -1.85
SNCAIP-201ENST00000261367 FLGP20930 4061 aaPredicted RBP3.51□□□□□ -1.85
SNCAIP-201ENST00000261367 LCE3AQ5TA76 89 aa3.5□□□□□ -1.85
SNCAIP-201ENST00000261367 PCLOQ9Y6V0 5065 aa3.49□□□□□ -1.85
SNCAIP-201ENST00000261367 RNF213Q63HN8 5207 aa3.48□□□□□ -1.85
SNCAIP-201ENST00000261367 HERC1Q15751 4861 aa3.47□□□□□ -1.85
SNCAIP-201ENST00000261367 SPRR5A0A1B0GTR4 108 aa3.46□□□□□ -1.86
SNCAIP-201ENST00000261367 BIRC6Q9NR09 4857 aa3.46□□□□□ -1.86
SNCAIP-201ENST00000261367 KRTAP19-4Q3LI73 84 aa3.45□□□□□ -1.86
SNCAIP-201ENST00000261367 GPR98Q8WXG9 6306 aa3.45□□□□□ -1.86
SNCAIP-201ENST00000261367 KRTAP19-2Q3LHN2 52 aa3.44□□□□□ -1.86
SNCAIP-201ENST00000261367 KRTAP4-1Q9BYQ7 146 aa3.42□□□□□ -1.86
SNCAIP-201ENST00000261367 HMCN2Q8NDA2 5059 aa3.4□□□□□ -1.86
SNCAIP-201ENST00000261367 KRTAP9-6A0A140TA67 174 aa3.36□□□□□ -1.87
SNCAIP-201ENST00000261367 KRTAP8-1Q8IUC2 63 aa3.32□□□□□ -1.88
SNCAIP-201ENST00000261367 UBR4Q5T4S7 5183 aa3.31□□□□□ -1.88
SNCAIP-201ENST00000261367 LCE2DQ5TA82 110 aaPredicted RBP3.25□□□□□ -1.89
SNCAIP-201ENST00000261367 SPRR2GQ9BYE4 73 aa3.25□□□□□ -1.89
SNCAIP-201ENST00000261367 CRCT1Q9UGL9 99 aa3.22□□□□□ -1.89
SNCAIP-201ENST00000261367 LCE3CQ5T5A8 94 aa3.21□□□□□ -1.9
SNCAIP-201ENST00000261367 MACF1Q9UPN3 7388 aaKnown RBP3.2□□□□□ -1.9
SNCAIP-201ENST00000261367 LCE2CQ5TA81 110 aa3.2□□□□□ -1.9
SNCAIP-201ENST00000261367 KRTAP10-5P60370 271 aa3.19□□□□□ -1.9
SNCAIP-201ENST00000261367 USH2AO75445 5202 aa3.17□□□□□ -1.9
SNCAIP-201ENST00000261367 KRTAP9-2Q9BYQ4 174 aa3.16□□□□□ -1.9
SNCAIP-201ENST00000261367 KMT2DO14686 5537 aa3.1□□□□□ -1.91
SNCAIP-201ENST00000261367 KRTAP9-7A8MTY7 169 aa3.08□□□□□ -1.92
SNCAIP-201ENST00000261367 KRTAP20-1Q3LI63 56 aa3.03□□□□□ -1.92
SNCAIP-201ENST00000261367 KRTAP19-5Q3LI72 72 aa3.03□□□□□ -1.92
SNCAIP-201ENST00000261367 KRTAP19-1Q8IUB9 90 aa3.03□□□□□ -1.92
SNCAIP-201ENST00000261367 FSIP2Q5CZC0 6907 aa3.03□□□□□ -1.92
SNCAIP-201ENST00000261367 KRTAP10-7P60409 375 aaPredicted RBP3.02□□□□□ -1.93
SNCAIP-201ENST00000261367 MT1HP80294 61 aa3.01□□□□□ -1.93
SNCAIP-201ENST00000261367 KRTAP19-8Q3LI54 63 aa3.01□□□□□ -1.93
SNCAIP-201ENST00000261367 KRTAP9-8Q9BYQ0 159 aa2.99□□□□□ -1.93
SNCAIP-201ENST00000261367 SPRR2FQ96RM1 72 aa2.98□□□□□ -1.93
SNCAIP-201ENST00000261367 MT2AP02795 61 aa2.97□□□□□ -1.93
SNCAIP-201ENST00000261367 SPRR2EP22531 72 aa2.97□□□□□ -1.93
SNCAIP-201ENST00000261367 SPRR2BP35325 72 aa2.97□□□□□ -1.93
SNCAIP-201ENST00000261367 SPRR2AP35326 72 aa2.97□□□□□ -1.93
SNCAIP-201ENST00000261367 MT1FP04733 61 aa2.97□□□□□ -1.93
SNCAIP-201ENST00000261367 SYNE2Q8WXH0 6885 aaKnown RBP2.96□□□□□ -1.94
SNCAIP-201ENST00000261367 KRTAP12-4P60329 112 aa2.95□□□□□ -1.94
SNCAIP-201ENST00000261367 LCE2AQ5TA79 106 aaPredicted RBP2.94□□□□□ -1.94
SNCAIP-201ENST00000261367 SPRR2DP22532 72 aa2.91□□□□□ -1.94
SNCAIP-201ENST00000261367 MT1BP07438 61 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 129.9 ms