RNA–Protein interactions for RNA: ENST00000261318.4

C12orf49-201, Transcript of chromosome 12 open reading frame 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C12orf49, Length 8,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf49-201ENST00000261318 LCE3AQ5TA76 89 aa6.4□□□□□ -1.38
C12orf49-201ENST00000261318 ALMS1Q8TCU4 4167 aa6.38□□□□□ -1.39
C12orf49-201ENST00000261318 LORP23490 312 aaPredicted RBP6.28□□□□□ -1.4
C12orf49-201ENST00000261318 KRTAP4-5Q9BYR2 181 aa6.22□□□□□ -1.41
C12orf49-201ENST00000261318 DNAH2Q9P225 4427 aa6.21□□□□□ -1.42
C12orf49-201ENST00000261318 DNAH1Q9P2D7 4330 aa6.16□□□□□ -1.42
C12orf49-201ENST00000261318 DNAH3Q8TD57 4116 aa6.15□□□□□ -1.43
C12orf49-201ENST00000261318 DNAH9Q9NYC9 4486 aa6.09□□□□□ -1.43
C12orf49-201ENST00000261318 KRTAP10-5P60370 271 aa6.08□□□□□ -1.44
C12orf49-201ENST00000261318 ANK2Q01484 3957 aa6.02□□□□□ -1.45
C12orf49-201ENST00000261318 DNAH10Q8IVF4 4471 aa6.01□□□□□ -1.45
C12orf49-201ENST00000261318 FRAS1Q86XX4 4008 aa5.98□□□□□ -1.45
C12orf49-201ENST00000261318 KRTAP8-1Q8IUC2 63 aa5.97□□□□□ -1.45
C12orf49-201ENST00000261318 VPS13BQ7Z7G8 4022 aa5.96□□□□□ -1.45
C12orf49-201ENST00000261318 KMT2AQ03164 3969 aa5.95□□□□□ -1.46
C12orf49-201ENST00000261318 LYSTQ99698 3801 aa5.9□□□□□ -1.47
C12orf49-201ENST00000261318 DNAH7Q8WXX0 4024 aa5.86□□□□□ -1.47
C12orf49-201ENST00000261318 KRTAP4-1Q9BYQ7 146 aa5.85□□□□□ -1.47
C12orf49-201ENST00000261318 DNAH8Q96JB1 4490 aa5.85□□□□□ -1.47
C12orf49-201ENST00000261318 PLECQ15149 4684 aaKnown RBP5.85□□□□□ -1.47
C12orf49-201ENST00000261318 SPRR2GQ9BYE4 73 aa5.84□□□□□ -1.48
C12orf49-201ENST00000261318 DNAH5Q8TE73 4624 aa5.83□□□□□ -1.48
C12orf49-201ENST00000261318 DNAH11Q96DT5 4516 aa5.82□□□□□ -1.48
C12orf49-201ENST00000261318 VPS13DQ5THJ4 4388 aa5.8□□□□□ -1.48
C12orf49-201ENST00000261318 HECTD4Q9Y4D8 3996 aa5.8□□□□□ -1.48
C12orf49-201ENST00000261318 FAT2Q9NYQ8 4349 aa5.78□□□□□ -1.48
C12orf49-201ENST00000261318 MT1HP80294 61 aa5.77□□□□□ -1.49
C12orf49-201ENST00000261318 CMYA5Q8N3K9 4069 aa5.77□□□□□ -1.49
C12orf49-201ENST00000261318 DNAH17Q9UFH2 4485 aa5.77□□□□□ -1.49
C12orf49-201ENST00000261318 DYNC2H1Q8NCM8 4307 aaKnown RBP5.75□□□□□ -1.49
C12orf49-201ENST00000261318 MT2AP02795 61 aa5.7□□□□□ -1.5
C12orf49-201ENST00000261318 DNAH6Q9C0G6 4158 aa5.69□□□□□ -1.5
C12orf49-201ENST00000261318 LCE3CQ5T5A8 94 aa5.69□□□□□ -1.5
C12orf49-201ENST00000261318 STARD9Q9P2P6 4700 aa5.69□□□□□ -1.5
C12orf49-201ENST00000261318 KRTAP19-5Q3LI72 72 aa5.69□□□□□ -1.5
C12orf49-201ENST00000261318 PRKDCP78527 4128 aaKnown RBP5.65□□□□□ -1.5
C12orf49-201ENST00000261318 MT1FP04733 61 aa5.59□□□□□ -1.51
C12orf49-201ENST00000261318 LRP1BQ9NZR2 4599 aa5.59□□□□□ -1.51
C12orf49-201ENST00000261318 KRTAP10-7P60409 375 aaPredicted RBP5.56□□□□□ -1.52
C12orf49-201ENST00000261318 KRTAP19-4Q3LI73 84 aa5.52□□□□□ -1.53
C12orf49-201ENST00000261318 FAT1Q14517 4588 aa5.51□□□□□ -1.53
C12orf49-201ENST00000261318 SPRR2FQ96RM1 72 aa5.49□□□□□ -1.53
C12orf49-201ENST00000261318 SACSQ9NZJ4 4579 aa5.4□□□□□ -1.55
C12orf49-201ENST00000261318 APOBP04114 4563 aaKnown RBP5.39□□□□□ -1.55
C12orf49-201ENST00000261318 KRTAP19-1Q8IUB9 90 aa5.33□□□□□ -1.56
C12orf49-201ENST00000261318 DYNC1H1Q14204 4646 aaKnown RBP5.32□□□□□ -1.56
C12orf49-201ENST00000261318 KRTAP19-8Q3LI54 63 aa5.32□□□□□ -1.56
C12orf49-201ENST00000261318 LCE3BQ5TA77 95 aa5.26□□□□□ -1.57
C12orf49-201ENST00000261318 MT1XP80297 61 aa5.25□□□□□ -1.57
C12orf49-201ENST00000261318 SPRR5A0A1B0GTR4 108 aa5.25□□□□□ -1.57
C12orf49-201ENST00000261318 KRTAP12-4P60329 112 aa5.24□□□□□ -1.57
C12orf49-201ENST00000261318 MYCBP2O75592 4640 aa5.23□□□□□ -1.57
C12orf49-201ENST00000261318 MT1GP13640 62 aa5.14□□□□□ -1.59
C12orf49-201ENST00000261318 LRP1Q07954 4544 aaKnown RBP5.14□□□□□ -1.59
C12orf49-201ENST00000261318 PKHD1P08F94 4074 aa5.14□□□□□ -1.59
C12orf49-201ENST00000261318 DNHD1Q96M86 4753 aa5.14□□□□□ -1.59
C12orf49-201ENST00000261318 FAT3Q8TDW7 4589 aa5.12□□□□□ -1.59
C12orf49-201ENST00000261318 MT1BP07438 61 aa5.1□□□□□ -1.59
C12orf49-201ENST00000261318 SPRR2EP22531 72 aa5.09□□□□□ -1.59
C12orf49-201ENST00000261318 SPRR2BP35325 72 aa5.09□□□□□ -1.59
C12orf49-201ENST00000261318 SPRR2AP35326 72 aa5.09□□□□□ -1.59
C12orf49-201ENST00000261318 FLGP20930 4061 aaPredicted RBP5.09□□□□□ -1.59
C12orf49-201ENST00000261318 RYR1P21817 5038 aa5.09□□□□□ -1.59
C12orf49-201ENST00000261318 KRTAP9-8Q9BYQ0 159 aa5.05□□□□□ -1.6
C12orf49-201ENST00000261318 PKD1P98161 4303 aa5.04□□□□□ -1.6
C12orf49-201ENST00000261318 PKHD1L1Q86WI1 4243 aa5.03□□□□□ -1.6
C12orf49-201ENST00000261318 KRTAP4-8A0A0G2JLE6 195 aa5.01□□□□□ -1.61
C12orf49-201ENST00000261318 KRTAP4-8Q9BYQ9 185 aa5.01□□□□□ -1.61
C12orf49-201ENST00000261318 KRTAP17-1Q9BYP8 105 aa5□□□□□ -1.61
C12orf49-201ENST00000261318 LCE3DQ9BYE3 92 aa5□□□□□ -1.61
C12orf49-201ENST00000261318 LCE2BO14633 110 aa4.97□□□□□ -1.61
C12orf49-201ENST00000261318 HSPG2P98160 4391 aa4.93□□□□□ -1.62
C12orf49-201ENST00000261318 SPRR2DP22532 72 aa4.93□□□□□ -1.62
C12orf49-201ENST00000261318 TNXBP22105 4242 aa4.92□□□□□ -1.62
C12orf49-201ENST00000261318 LCE3EQ5T5B0 92 aa4.91□□□□□ -1.62
C12orf49-201ENST00000261318 KRTAP9-3Q9BYQ3 159 aa4.91□□□□□ -1.62
C12orf49-201ENST00000261318 RYR3Q15413 4870 aa4.87□□□□□ -1.63
C12orf49-201ENST00000261318 LCE2CQ5TA81 110 aa4.87□□□□□ -1.63
C12orf49-201ENST00000261318 LPAP08519 4548 aa4.85□□□□□ -1.63
C12orf49-201ENST00000261318 LRP2P98164 4655 aa4.85□□□□□ -1.63
C12orf49-201ENST00000261318 MT1LQ93083 61 aa4.81□□□□□ -1.64
C12orf49-201ENST00000261318 KRTAP19-3Q7Z4W3 81 aa4.79□□□□□ -1.64
C12orf49-201ENST00000261318 KRTAP4-7Q9BYR0 210 aa4.77□□□□□ -1.65
C12orf49-201ENST00000261318 MT1EP04732 61 aa4.72□□□□□ -1.65
C12orf49-201ENST00000261318 PRM1P04553 51 aa4.62□□□□□ -1.67
C12orf49-201ENST00000261318 KRTAP19-2Q3LHN2 52 aa4.61□□□□□ -1.67
C12orf49-201ENST00000261318 RYR2Q92736 4967 aa4.59□□□□□ -1.67
C12orf49-201ENST00000261318 MT1MQ8N339 61 aa4.57□□□□□ -1.68
C12orf49-201ENST00000261318 HYDINQ4G0P3 5121 aa4.57□□□□□ -1.68
C12orf49-201ENST00000261318 LOC100996750A0A140TA64 210 aa4.53□□□□□ -1.68
C12orf49-201ENST00000261318 MT3P25713 68 aa4.52□□□□□ -1.69
C12orf49-201ENST00000261318 KMT2CQ8NEZ4 4911 aaKnown RBP4.51□□□□□ -1.69
C12orf49-201ENST00000261318 LCE2DQ5TA82 110 aaPredicted RBP4.5□□□□□ -1.69
C12orf49-201ENST00000261318 KIAA1109Q2LD37 5005 aa4.49□□□□□ -1.69
C12orf49-201ENST00000261318 MUC17Q685J3 4493 aa4.43□□□□□ -1.7
C12orf49-201ENST00000261318 KRTAP4-3Q9BYR4 195 aa4.43□□□□□ -1.7
C12orf49-201ENST00000261318 HERC2O95714 4834 aa4.38□□□□□ -1.71
C12orf49-201ENST00000261318 KRTAP19-6Q3LI70 58 aa4.38□□□□□ -1.71
C12orf49-201ENST00000261318 MT4P47944 62 aa4.38□□□□□ -1.71
C12orf49-201ENST00000261318 KRTAP2-3P0C7H8 128 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 346.5 ms