RNA–Protein interactions for RNA: ENST00000259006.7

LIMD2-201, Transcript of LIM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD2, Length 3,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-201ENST00000259006 FAT1Q14517 4588 aa7.49□□□□□ -1.21
LIMD2-201ENST00000259006 KRTAP3-1Q9BYR8 98 aa7.47□□□□□ -1.21
LIMD2-201ENST00000259006 RYR3Q15413 4870 aa7.47□□□□□ -1.21
LIMD2-201ENST00000259006 A0A0D9SG42 100 aa7.46□□□□□ -1.22
LIMD2-201ENST00000259006 COX6B2Q6YFQ2 88 aa7.43□□□□□ -1.22
LIMD2-201ENST00000259006 A0A1B0GVY2 172 aa7.38□□□□□ -1.23
LIMD2-201ENST00000259006 RPL37P61927 97 aaKnown RBP7.36□□□□□ -1.23
LIMD2-201ENST00000259006 APOBP04114 4563 aaKnown RBP7.32□□□□□ -1.24
LIMD2-201ENST00000259006 KIAA1109Q2LD37 5005 aa7.3□□□□□ -1.24
LIMD2-201ENST00000259006 EPPK1P58107 5090 aaKnown RBP7.25□□□□□ -1.25
LIMD2-201ENST00000259006 MYCBP2O75592 4640 aa7.23□□□□□ -1.25
LIMD2-201ENST00000259006 KRTAP13-4Q3LI77 160 aa7.22□□□□□ -1.25
LIMD2-201ENST00000259006 LRP1Q07954 4544 aaKnown RBP7.2□□□□□ -1.26
LIMD2-201ENST00000259006 Q5VSD8 79 aa7.19□□□□□ -1.26
LIMD2-201ENST00000259006 SEC61BP60468 96 aaKnown RBP7.16□□□□□ -1.26
LIMD2-201ENST00000259006 RPS29P62273 56 aaKnown RBP7.14□□□□□ -1.27
LIMD2-201ENST00000259006 HSPG2P98160 4391 aa7.14□□□□□ -1.27
LIMD2-201ENST00000259006 KRTAP17-1Q9BYP8 105 aa7.14□□□□□ -1.27
LIMD2-201ENST00000259006 RYR1P21817 5038 aa7.13□□□□□ -1.27
LIMD2-201ENST00000259006 KRTAP10-6P60371 365 aaPredicted RBP7.12□□□□□ -1.27
LIMD2-201ENST00000259006 KRTAP10-4P60372 401 aaPredicted RBP7.12□□□□□ -1.27
LIMD2-201ENST00000259006 KRTAP10-8P60410 259 aa7.11□□□□□ -1.27
LIMD2-201ENST00000259006 S4R3F8 94 aa7.1□□□□□ -1.27
LIMD2-201ENST00000259006 KRTAP3-3Q9BYR6 98 aa7.09□□□□□ -1.27
LIMD2-201ENST00000259006 KRTAP12-2P59991 146 aa7.06□□□□□ -1.28
LIMD2-201ENST00000259006 J3QL48 77 aa7.04□□□□□ -1.28
LIMD2-201ENST00000259006 KRTAP3-2Q9BYR7 98 aa7.03□□□□□ -1.28
LIMD2-201ENST00000259006 PKHD1L1Q86WI1 4243 aa7□□□□□ -1.29
LIMD2-201ENST00000259006 KRTAP4-5Q9BYR2 181 aa7□□□□□ -1.29
LIMD2-201ENST00000259006 PLAC4Q8WY50 150 aa6.99□□□□□ -1.29
LIMD2-201ENST00000259006 LPAP08519 4548 aa6.95□□□□□ -1.3
LIMD2-201ENST00000259006 FAT3Q8TDW7 4589 aa6.94□□□□□ -1.3
LIMD2-201ENST00000259006 XP32Q5T750 250 aa6.94□□□□□ -1.3
LIMD2-201ENST00000259006 KRTAP12-1P59990 96 aa6.87□□□□□ -1.31
LIMD2-201ENST00000259006 ABCA13Q86UQ4 5058 aa6.86□□□□□ -1.31
LIMD2-201ENST00000259006 TNXBP22105 4242 aa6.85□□□□□ -1.31
LIMD2-201ENST00000259006 HERC2O95714 4834 aa6.83□□□□□ -1.32
LIMD2-201ENST00000259006 LRP2P98164 4655 aa6.82□□□□□ -1.32
LIMD2-201ENST00000259006 MT1HL1P0DM35 61 aa6.81□□□□□ -1.32
LIMD2-201ENST00000259006 BIRC6Q9NR09 4857 aa6.75□□□□□ -1.33
LIMD2-201ENST00000259006 M0QZ58 72 aa6.72□□□□□ -1.33
LIMD2-201ENST00000259006 R4GN34 69 aa6.65□□□□□ -1.34
LIMD2-201ENST00000259006 CAMK2N1Q7Z7J9 78 aa6.63□□□□□ -1.35
LIMD2-201ENST00000259006 PCLOQ9Y6V0 5065 aa6.63□□□□□ -1.35
LIMD2-201ENST00000259006 HERC1Q15751 4861 aa6.61□□□□□ -1.35
LIMD2-201ENST00000259006 LORP23490 312 aaPredicted RBP6.58□□□□□ -1.36
LIMD2-201ENST00000259006 MUC2Q02817 5179 aa6.49□□□□□ -1.37
LIMD2-201ENST00000259006 PRO2289Q9P1D8 64 aa6.47□□□□□ -1.37
LIMD2-201ENST00000259006 RNF213Q63HN8 5207 aa6.32□□□□□ -1.4
LIMD2-201ENST00000259006 KRTAP4-1Q9BYQ7 146 aa6.32□□□□□ -1.4
LIMD2-201ENST00000259006 HMCN2Q8NDA2 5059 aa6.28□□□□□ -1.4
LIMD2-201ENST00000259006 PP632Q6XCG6 107 aa6.28□□□□□ -1.4
LIMD2-201ENST00000259006 UBR4Q5T4S7 5183 aa6.27□□□□□ -1.4
LIMD2-201ENST00000259006 MUC17Q685J3 4493 aa6.21□□□□□ -1.42
LIMD2-201ENST00000259006 FAT4Q6V0I7 4981 aa6.16□□□□□ -1.42
LIMD2-201ENST00000259006 SPRR5A0A1B0GTR4 108 aa6.12□□□□□ -1.43
LIMD2-201ENST00000259006 INE1O15225 51 aa6.1□□□□□ -1.43
LIMD2-201ENST00000259006 TNP1P09430 55 aa6.04□□□□□ -1.44
LIMD2-201ENST00000259006 KRTAP19-2Q3LHN2 52 aa6□□□□□ -1.45
LIMD2-201ENST00000259006 M0R2T5 61 aa5.98□□□□□ -1.45
LIMD2-201ENST00000259006 FLGP20930 4061 aaPredicted RBP5.89□□□□□ -1.47
LIMD2-201ENST00000259006 LCE2CQ5TA81 110 aa5.81□□□□□ -1.48
LIMD2-201ENST00000259006 LCE3AQ5TA76 89 aa5.77□□□□□ -1.49
LIMD2-201ENST00000259006 MT1HP80294 61 aa5.74□□□□□ -1.49
LIMD2-201ENST00000259006 KRTAP19-1Q8IUB9 90 aa5.68□□□□□ -1.5
LIMD2-201ENST00000259006 KRTAP23-1A1A580 65 aa5.67□□□□□ -1.5
LIMD2-201ENST00000259006 KRTAP10-10P60014 251 aa5.66□□□□□ -1.5
LIMD2-201ENST00000259006 SPRR2GQ9BYE4 73 aa5.59□□□□□ -1.52
LIMD2-201ENST00000259006 MT1FP04733 61 aa5.56□□□□□ -1.52
LIMD2-201ENST00000259006 MT2AP02795 61 aa5.55□□□□□ -1.52
LIMD2-201ENST00000259006 USH2AO75445 5202 aa5.51□□□□□ -1.53
LIMD2-201ENST00000259006 KRTAP9-8Q9BYQ0 159 aa5.51□□□□□ -1.53
LIMD2-201ENST00000259006 FSIP2Q5CZC0 6907 aa5.47□□□□□ -1.53
LIMD2-201ENST00000259006 KRTAP12-3P60328 96 aa5.43□□□□□ -1.54
LIMD2-201ENST00000259006 KMT2DO14686 5537 aa5.41□□□□□ -1.54
LIMD2-201ENST00000259006 KRTAP8-1Q8IUC2 63 aa5.4□□□□□ -1.55
LIMD2-201ENST00000259006 KRTAP10-12P60413 245 aa5.39□□□□□ -1.55
LIMD2-201ENST00000259006 KRTAP10-5P60370 271 aa5.38□□□□□ -1.55
LIMD2-201ENST00000259006 KRTAP10-7P60409 375 aaPredicted RBP5.37□□□□□ -1.55
LIMD2-201ENST00000259006 MT1XP80297 61 aa5.37□□□□□ -1.55
LIMD2-201ENST00000259006 LCE2AQ5TA79 106 aaPredicted RBP5.34□□□□□ -1.55
LIMD2-201ENST00000259006 MT1BP07438 61 aa5.33□□□□□ -1.56
LIMD2-201ENST00000259006 KRTAP9-3Q9BYQ3 159 aa5.29□□□□□ -1.56
LIMD2-201ENST00000259006 KRTAP19-8Q3LI54 63 aa5.24□□□□□ -1.57
LIMD2-201ENST00000259006 LCE2BO14633 110 aa5.22□□□□□ -1.57
LIMD2-201ENST00000259006 KRTAP19-5Q3LI72 72 aa5.16□□□□□ -1.58
LIMD2-201ENST00000259006 LCE2DQ5TA82 110 aaPredicted RBP5.13□□□□□ -1.59
LIMD2-201ENST00000259006 KRTAP4-8A0A0G2JLE6 195 aa5.11□□□□□ -1.59
LIMD2-201ENST00000259006 KRTAP4-8Q9BYQ9 185 aa5.11□□□□□ -1.59
LIMD2-201ENST00000259006 LCE3CQ5T5A8 94 aa5.06□□□□□ -1.6
LIMD2-201ENST00000259006 SSPOA2VEC9 5147 aa5.06□□□□□ -1.6
LIMD2-201ENST00000259006 KRTAP4-7Q9BYR0 210 aa5.06□□□□□ -1.6
LIMD2-201ENST00000259006 KRTAP9-6A8MVA2 160 aa5.01□□□□□ -1.61
LIMD2-201ENST00000259006 KRTAP2-3P0C7H8 128 aa4.83□□□□□ -1.64
LIMD2-201ENST00000259006 KRTAP2-4Q9BYR9 128 aa4.83□□□□□ -1.64
LIMD2-201ENST00000259006 KRTAP2-1Q9BYU5 128 aa4.83□□□□□ -1.64
LIMD2-201ENST00000259006 FCGBPQ9Y6R7 5405 aaPredicted RBP4.82□□□□□ -1.64
LIMD2-201ENST00000259006 DSTQ03001 7570 aaKnown RBP4.8□□□□□ -1.64
LIMD2-201ENST00000259006 KRTAP19-7Q3SYF9 63 aa4.77□□□□□ -1.65
LIMD2-201ENST00000259006 KRTAP9-2Q9BYQ4 174 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms