RNA–Protein interactions for RNA: ENST00000256720.6

LPIN1-201, Transcript of lipin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPIN1, Length 5,384 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPIN1-201ENST00000256720 KRTAP3-1Q9BYR8 98 aa4.77□□□□□ -1.65
LPIN1-201ENST00000256720 KRTAP12-2P59991 146 aa4.73□□□□□ -1.65
LPIN1-201ENST00000256720 INE1O15225 51 aa4.72□□□□□ -1.65
LPIN1-201ENST00000256720 KRTAP15-1Q3LI76 137 aa4.7□□□□□ -1.66
LPIN1-201ENST00000256720 DNAH3Q8TD57 4116 aa4.7□□□□□ -1.66
LPIN1-201ENST00000256720 DNAH17Q9UFH2 4485 aa4.7□□□□□ -1.66
LPIN1-201ENST00000256720 PRKDCP78527 4128 aaKnown RBP4.69□□□□□ -1.66
LPIN1-201ENST00000256720 STARD9Q9P2P6 4700 aa4.68□□□□□ -1.66
LPIN1-201ENST00000256720 DYNC1H1Q14204 4646 aaKnown RBP4.67□□□□□ -1.66
LPIN1-201ENST00000256720 LYSTQ99698 3801 aa4.62□□□□□ -1.67
LPIN1-201ENST00000256720 DNAH6Q9C0G6 4158 aa4.62□□□□□ -1.67
LPIN1-201ENST00000256720 DYNC2H1Q8NCM8 4307 aaKnown RBP4.61□□□□□ -1.67
LPIN1-201ENST00000256720 LRP1BQ9NZR2 4599 aa4.61□□□□□ -1.67
LPIN1-201ENST00000256720 FAT2Q9NYQ8 4349 aa4.6□□□□□ -1.67
LPIN1-201ENST00000256720 FAT1Q14517 4588 aa4.57□□□□□ -1.68
LPIN1-201ENST00000256720 KMT2AQ03164 3969 aa4.57□□□□□ -1.68
LPIN1-201ENST00000256720 DNAH2Q9P225 4427 aa4.55□□□□□ -1.68
LPIN1-201ENST00000256720 KRTAP12-1P59990 96 aa4.54□□□□□ -1.68
LPIN1-201ENST00000256720 KRTAP10-6P60371 365 aaPredicted RBP4.54□□□□□ -1.68
LPIN1-201ENST00000256720 KRTAP3-3Q9BYR6 98 aa4.51□□□□□ -1.69
LPIN1-201ENST00000256720 DNAH7Q8WXX0 4024 aa4.51□□□□□ -1.69
LPIN1-201ENST00000256720 DNAH8Q96JB1 4490 aa4.48□□□□□ -1.69
LPIN1-201ENST00000256720 SACSQ9NZJ4 4579 aa4.47□□□□□ -1.69
LPIN1-201ENST00000256720 KRTAP23-1A1A580 65 aa4.46□□□□□ -1.69
LPIN1-201ENST00000256720 RYR1P21817 5038 aa4.45□□□□□ -1.7
LPIN1-201ENST00000256720 KRTAP4-1Q9BYQ7 146 aa4.44□□□□□ -1.7
LPIN1-201ENST00000256720 KRTAP3-2Q9BYR7 98 aa4.43□□□□□ -1.7
LPIN1-201ENST00000256720 KRTAP10-12P60413 245 aa4.43□□□□□ -1.7
LPIN1-201ENST00000256720 RYR2Q92736 4967 aa4.42□□□□□ -1.7
LPIN1-201ENST00000256720 MT1HP80294 61 aa4.4□□□□□ -1.7
LPIN1-201ENST00000256720 KRTAP17-1Q9BYP8 105 aa4.4□□□□□ -1.71
LPIN1-201ENST00000256720 RYR3Q15413 4870 aa4.37□□□□□ -1.71
LPIN1-201ENST00000256720 BIRC6Q9NR09 4857 aa4.37□□□□□ -1.71
LPIN1-201ENST00000256720 KIAA1109Q2LD37 5005 aa4.36□□□□□ -1.71
LPIN1-201ENST00000256720 VPS13BQ7Z7G8 4022 aa4.36□□□□□ -1.71
LPIN1-201ENST00000256720 FRAS1Q86XX4 4008 aa4.35□□□□□ -1.71
LPIN1-201ENST00000256720 MYCBP2O75592 4640 aa4.33□□□□□ -1.72
LPIN1-201ENST00000256720 APOBP04114 4563 aaKnown RBP4.33□□□□□ -1.72
LPIN1-201ENST00000256720 HYDINQ4G0P3 5121 aa4.29□□□□□ -1.72
LPIN1-201ENST00000256720 LORP23490 312 aaPredicted RBP4.28□□□□□ -1.72
LPIN1-201ENST00000256720 LRP1Q07954 4544 aaKnown RBP4.27□□□□□ -1.73
LPIN1-201ENST00000256720 MT2AP02795 61 aa4.26□□□□□ -1.73
LPIN1-201ENST00000256720 HECTD4Q9Y4D8 3996 aa4.26□□□□□ -1.73
LPIN1-201ENST00000256720 FAT3Q8TDW7 4589 aa4.25□□□□□ -1.73
LPIN1-201ENST00000256720 KRTAP12-3P60328 96 aa4.25□□□□□ -1.73
LPIN1-201ENST00000256720 CRCT1Q9UGL9 99 aa4.23□□□□□ -1.73
LPIN1-201ENST00000256720 HSPG2P98160 4391 aa4.22□□□□□ -1.73
LPIN1-201ENST00000256720 PKHD1P08F94 4074 aa4.22□□□□□ -1.73
LPIN1-201ENST00000256720 KRTAP19-4Q3LI73 84 aa4.18□□□□□ -1.74
LPIN1-201ENST00000256720 HERC2O95714 4834 aa4.18□□□□□ -1.74
LPIN1-201ENST00000256720 MT1FP04733 61 aa4.17□□□□□ -1.74
LPIN1-201ENST00000256720 SPRR2GQ9BYE4 73 aa4.16□□□□□ -1.74
LPIN1-201ENST00000256720 KRTAP8-1Q8IUC2 63 aa4.16□□□□□ -1.74
LPIN1-201ENST00000256720 PKD1P98161 4303 aa4.14□□□□□ -1.75
LPIN1-201ENST00000256720 KMT2CQ8NEZ4 4911 aaKnown RBP4.13□□□□□ -1.75
LPIN1-201ENST00000256720 PKHD1L1Q86WI1 4243 aa4.1□□□□□ -1.75
LPIN1-201ENST00000256720 HERC1Q15751 4861 aa4.09□□□□□ -1.75
LPIN1-201ENST00000256720 LCE3AQ5TA76 89 aa4.08□□□□□ -1.76
LPIN1-201ENST00000256720 LRP2P98164 4655 aa4.05□□□□□ -1.76
LPIN1-201ENST00000256720 KRTAP10-5P60370 271 aa4.05□□□□□ -1.76
LPIN1-201ENST00000256720 KRTAP10-7P60409 375 aaPredicted RBP3.99□□□□□ -1.77
LPIN1-201ENST00000256720 LCE2CQ5TA81 110 aa3.97□□□□□ -1.77
LPIN1-201ENST00000256720 LPAP08519 4548 aa3.96□□□□□ -1.78
LPIN1-201ENST00000256720 KRTAP19-8Q3LI54 63 aa3.95□□□□□ -1.78
LPIN1-201ENST00000256720 EPPK1P58107 5090 aaKnown RBP3.95□□□□□ -1.78
LPIN1-201ENST00000256720 KRTAP9-8Q9BYQ0 159 aa3.94□□□□□ -1.78
LPIN1-201ENST00000256720 PCLOQ9Y6V0 5065 aa3.92□□□□□ -1.78
LPIN1-201ENST00000256720 TNXBP22105 4242 aa3.92□□□□□ -1.78
LPIN1-201ENST00000256720 KRTAP19-1Q8IUB9 90 aa3.91□□□□□ -1.78
LPIN1-201ENST00000256720 SPRR2FQ96RM1 72 aa3.9□□□□□ -1.78
LPIN1-201ENST00000256720 ABCA13Q86UQ4 5058 aa3.86□□□□□ -1.79
LPIN1-201ENST00000256720 KRTAP9-3Q9BYQ3 159 aa3.85□□□□□ -1.79
LPIN1-201ENST00000256720 KRTAP19-2Q3LHN2 52 aa3.83□□□□□ -1.8
LPIN1-201ENST00000256720 MUC17Q685J3 4493 aa3.82□□□□□ -1.8
LPIN1-201ENST00000256720 MT1BP07438 61 aa3.81□□□□□ -1.8
LPIN1-201ENST00000256720 KRTAP19-5Q3LI72 72 aa3.79□□□□□ -1.8
LPIN1-201ENST00000256720 MT1XP80297 61 aa3.76□□□□□ -1.81
LPIN1-201ENST00000256720 SPRR2EP22531 72 aa3.74□□□□□ -1.81
LPIN1-201ENST00000256720 SPRR2BP35325 72 aa3.74□□□□□ -1.81
LPIN1-201ENST00000256720 SPRR2AP35326 72 aa3.74□□□□□ -1.81
LPIN1-201ENST00000256720 KRTAP9-2Q9BYQ4 174 aa3.71□□□□□ -1.81
LPIN1-201ENST00000256720 LCE2AQ5TA79 106 aaPredicted RBP3.7□□□□□ -1.82
LPIN1-201ENST00000256720 LCE2DQ5TA82 110 aaPredicted RBP3.69□□□□□ -1.82
LPIN1-201ENST00000256720 LCE2BO14633 110 aa3.68□□□□□ -1.82
LPIN1-201ENST00000256720 FLGP20930 4061 aaPredicted RBP3.66□□□□□ -1.82
LPIN1-201ENST00000256720 KRTAP12-4P60329 112 aa3.64□□□□□ -1.83
LPIN1-201ENST00000256720 LCE3CQ5T5A8 94 aa3.63□□□□□ -1.83
LPIN1-201ENST00000256720 SPRR2DP22532 72 aa3.62□□□□□ -1.83
LPIN1-201ENST00000256720 KRTAP19-6Q3LI70 58 aa3.61□□□□□ -1.83
LPIN1-201ENST00000256720 RNF213Q63HN8 5207 aa3.6□□□□□ -1.83
LPIN1-201ENST00000256720 MUC2Q02817 5179 aa3.59□□□□□ -1.83
LPIN1-201ENST00000256720 HMCN2Q8NDA2 5059 aa3.58□□□□□ -1.84
LPIN1-201ENST00000256720 FSIP2Q5CZC0 6907 aa3.57□□□□□ -1.84
LPIN1-201ENST00000256720 FAT4Q6V0I7 4981 aa3.57□□□□□ -1.84
LPIN1-201ENST00000256720 KRTAP9-6A0A140TA67 174 aa3.56□□□□□ -1.84
LPIN1-201ENST00000256720 KRTAP4-8A0A0G2JLE6 195 aa3.56□□□□□ -1.84
LPIN1-201ENST00000256720 KRTAP4-8Q9BYQ9 185 aa3.56□□□□□ -1.84
LPIN1-201ENST00000256720 UBR4Q5T4S7 5183 aa3.54□□□□□ -1.84
LPIN1-201ENST00000256720 MT1GP13640 62 aa3.53□□□□□ -1.84
LPIN1-201ENST00000256720 KRTAP19-3Q7Z4W3 81 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms