RNA–Protein interactions for RNA: ENST00000256720.6

LPIN1-201, Transcript of lipin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPIN1, Length 5,384 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPIN1-201ENST00000256720 NISCHQ9Y2I1 1504 aa18.93■□□□□ 0.62
LPIN1-201ENST00000256720 DCAF8L2P0C7V8 631 aa18.27■□□□□ 0.52
LPIN1-201ENST00000256720 SHROOM4Q9ULL8 1493 aa17■□□□□ 0.31
LPIN1-201ENST00000256720 SUPT5HO00267 1087 aaKnown RBP16.88■□□□□ 0.29
LPIN1-201ENST00000256720 ABCC9O60706 1549 aa16.43■□□□□ 0.22
LPIN1-201ENST00000256720 CCDC180Q9P1Z9 1646 aa16.07■□□□□ 0.16
LPIN1-201ENST00000256720 FAM9AQ8IZU1 332 aaPredicted RBP16.01■□□□□ 0.15
LPIN1-201ENST00000256720 EHMT2Q96KQ7 1210 aa15.97■□□□□ 0.15
LPIN1-201ENST00000256720 PABPN1Q86U42 306 aaKnown RBP eCLIP15.95■□□□□ 0.14
LPIN1-201ENST00000256720 APLP2Q06481 763 aa15.83■□□□□ 0.12
LPIN1-201ENST00000256720 TRIM41Q8WV44 630 aa15.82■□□□□ 0.12
LPIN1-201ENST00000256720 ZCCHC6Q5VYS8 1495 aaKnown RBP15.69■□□□□ 0.1
LPIN1-201ENST00000256720 RB1CC1Q8TDY2 1594 aa15.62■□□□□ 0.09
LPIN1-201ENST00000256720 PELP1Q8IZL8 1130 aaKnown RBP15.6■□□□□ 0.09
LPIN1-201ENST00000256720 SCRIBQ14160 1630 aa15.58■□□□□ 0.08
LPIN1-201ENST00000256720 RANGAP1P46060 587 aaPredicted RBP15.57■□□□□ 0.08
LPIN1-201ENST00000256720 UBTFP17480 764 aaKnown RBP15.54■□□□□ 0.08
LPIN1-201ENST00000256720 NACADO15069 1562 aa15.49■□□□□ 0.07
LPIN1-201ENST00000256720 ATP1B4Q9UN42 357 aaPredicted RBP15.49■□□□□ 0.07
LPIN1-201ENST00000256720 TTBK1Q5TCY1 1321 aaPredicted RBP15.33■□□□□ 0.04
LPIN1-201ENST00000256720 DCAF1Q9Y4B6 1507 aa15.22■□□□□ 0.03
LPIN1-201ENST00000256720 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.17■□□□□ 0.02
LPIN1-201ENST00000256720 HNRNPUL2Q1KMD3 747 aaKnown RBP15.17■□□□□ 0.02
LPIN1-201ENST00000256720 CHIC1Q5VXU3 224 aa15.16■□□□□ 0.02
LPIN1-201ENST00000256720 FBLN2P98095 1184 aa15.06■□□□□ 0
LPIN1-201ENST00000256720 PCGF6Q9BYE7 350 aa15.02■□□□□ -0
LPIN1-201ENST00000256720 MYT1LQ9UL68 1186 aa15.02■□□□□ -0
LPIN1-201ENST00000256720 MYO15BQ96JP2 1530 aa14.97□□□□□ -0.01
LPIN1-201ENST00000256720 BAZ1BQ9UIG0 1483 aaKnown RBP14.95□□□□□ -0.02
LPIN1-201ENST00000256720 BAZ1AQ9NRL2 1556 aaPredicted RBP14.9□□□□□ -0.02
LPIN1-201ENST00000256720 LOC105371045A0A1W2PR82 267 aa14.89□□□□□ -0.03
LPIN1-201ENST00000256720 CCER1Q8TC90 406 aaPredicted RBP14.88□□□□□ -0.03
LPIN1-201ENST00000256720 RSF1Q96T23 1441 aaPredicted RBP14.86□□□□□ -0.03
LPIN1-201ENST00000256720 PPARGC1BQ86YN6 1023 aaKnown RBP14.85□□□□□ -0.03
LPIN1-201ENST00000256720 CSRNP3Q8WYN3 585 aa14.8□□□□□ -0.04
LPIN1-201ENST00000256720 ITGAEP38570 1179 aa14.78□□□□□ -0.04
LPIN1-201ENST00000256720 ERCC6Q03468 1493 aa14.77□□□□□ -0.05
LPIN1-201ENST00000256720 ZEB1P37275 1124 aaPredicted RBP14.76□□□□□ -0.05
LPIN1-201ENST00000256720 CECR2Q9BXF3 1484 aa14.73□□□□□ -0.05
LPIN1-201ENST00000256720 SMARCA2P51531 1590 aa14.72□□□□□ -0.05
LPIN1-201ENST00000256720 TRIM26Q12899 539 aaPredicted RBP14.7□□□□□ -0.06
LPIN1-201ENST00000256720 CHMP7Q8WUX9 453 aaPredicted RBP14.67□□□□□ -0.06
LPIN1-201ENST00000256720 P3H3Q8IVL6 736 aa14.65□□□□□ -0.06
LPIN1-201ENST00000256720 NPM1P06748 294 aaKnown RBP eCLIP14.64□□□□□ -0.07
LPIN1-201ENST00000256720 FAM50AQ14320 339 aaKnown RBP14.63□□□□□ -0.07
LPIN1-201ENST00000256720 CDK11AQ9UQ88 783 aaPredicted RBP14.62□□□□□ -0.07
LPIN1-201ENST00000256720 ERICH6Q7L0X2 663 aa14.61□□□□□ -0.07
LPIN1-201ENST00000256720 MROH2BQ7Z745 1585 aa14.58□□□□□ -0.08
LPIN1-201ENST00000256720 WRNQ14191 1432 aaPredicted RBP eCLIP14.57□□□□□ -0.08
LPIN1-201ENST00000256720 ARID3CA6NKF2 412 aa14.55□□□□□ -0.08
LPIN1-201ENST00000256720 PDS5BQ9NTI5 1447 aa14.55□□□□□ -0.08
LPIN1-201ENST00000256720 EEA1Q15075 1411 aa14.48□□□□□ -0.09
LPIN1-201ENST00000256720 TRIM52Q96A61 297 aa14.48□□□□□ -0.09
LPIN1-201ENST00000256720 KIF27Q86VH2 1401 aa14.47□□□□□ -0.09
LPIN1-201ENST00000256720 ATAD2BQ9ULI0 1458 aa14.46□□□□□ -0.1
LPIN1-201ENST00000256720 SMARCA4P51532 1647 aa14.45□□□□□ -0.1
LPIN1-201ENST00000256720 TOP2AP11388 1531 aaKnown RBP14.45□□□□□ -0.1
LPIN1-201ENST00000256720 CCDC88BA6NC98 1476 aa14.44□□□□□ -0.1
LPIN1-201ENST00000256720 ZNF777Q9ULD5 760 aaPredicted RBP14.42□□□□□ -0.1
LPIN1-201ENST00000256720 CADPSQ9ULU8 1353 aa14.39□□□□□ -0.11
LPIN1-201ENST00000256720 WIZO95785 1651 aa14.39□□□□□ -0.11
LPIN1-201ENST00000256720 ESF1Q9H501 851 aaKnown RBP14.35□□□□□ -0.11
LPIN1-201ENST00000256720 GOLGA3Q08378 1498 aa14.34□□□□□ -0.11
LPIN1-201ENST00000256720 POLR3GLQ9BT43 218 aa14.33□□□□□ -0.12
LPIN1-201ENST00000256720 EIF4G1Q04637 1599 aaKnown RBP14.31□□□□□ -0.12
LPIN1-201ENST00000256720 CUX2O14529 1486 aa14.31□□□□□ -0.12
LPIN1-201ENST00000256720 CEP164Q9UPV0 1460 aa14.3□□□□□ -0.12
LPIN1-201ENST00000256720 YTHDC1Q96MU7 727 aaKnown RBP14.29□□□□□ -0.12
LPIN1-201ENST00000256720 CLIP1P30622 1438 aa14.29□□□□□ -0.12
LPIN1-201ENST00000256720 SOGA1O94964 1423 aa14.28□□□□□ -0.12
LPIN1-201ENST00000256720 CENPBP07199 599 aaPredicted RBP14.27□□□□□ -0.13
LPIN1-201ENST00000256720 MTUS2Q5JR59 1369 aa14.27□□□□□ -0.13
LPIN1-201ENST00000256720 PLEKHD1A6NEE1 506 aa14.24□□□□□ -0.13
LPIN1-201ENST00000256720 NCAPD3P42695 1498 aa14.24□□□□□ -0.13
LPIN1-201ENST00000256720 CARMIL1Q5VZK9 1371 aa14.23□□□□□ -0.13
LPIN1-201ENST00000256720 NEFLP07196 543 aa14.23□□□□□ -0.13
LPIN1-201ENST00000256720 MYT1Q01538 1121 aa14.23□□□□□ -0.13
LPIN1-201ENST00000256720 HRCP23327 699 aa14.22□□□□□ -0.13
LPIN1-201ENST00000256720 SLC4A1APQ9BWU0 796 aaKnown RBP14.22□□□□□ -0.13
LPIN1-201ENST00000256720 FANCD2Q9BXW9 1451 aa14.21□□□□□ -0.14
LPIN1-201ENST00000256720 ABCC8Q09428 1581 aa14.2□□□□□ -0.14
LPIN1-201ENST00000256720 NEUROD1Q13562 356 aa14.2□□□□□ -0.14
LPIN1-201ENST00000256720 BCANQ96GW7 911 aa14.2□□□□□ -0.14
LPIN1-201ENST00000256720 KCNH8Q96L42 1107 aa14.2□□□□□ -0.14
LPIN1-201ENST00000256720 TSPY4P0CV99 314 aa14.19□□□□□ -0.14
LPIN1-201ENST00000256720 TSPY10P0CW01 314 aa14.19□□□□□ -0.14
LPIN1-201ENST00000256720 TDRD9Q8NDG6 1382 aaKnown RBP14.17□□□□□ -0.14
LPIN1-201ENST00000256720 CC2D2AQ9P2K1 1620 aa14.15□□□□□ -0.15
LPIN1-201ENST00000256720 ZNF326Q5BKZ1 582 aaKnown RBP14.14□□□□□ -0.15
LPIN1-201ENST00000256720 TNIKQ9UKE5 1360 aa14.14□□□□□ -0.15
LPIN1-201ENST00000256720 CEP162Q5TB80 1403 aa14.13□□□□□ -0.15
LPIN1-201ENST00000256720 STAG3Q9UJ98 1225 aa14.13□□□□□ -0.15
LPIN1-201ENST00000256720 CARMIL2Q6F5E8 1435 aa14.12□□□□□ -0.15
LPIN1-201ENST00000256720 PLPPR3Q6T4P5 718 aa14.09□□□□□ -0.15
LPIN1-201ENST00000256720 DAXXQ9UER7 740 aaPredicted RBP14.08□□□□□ -0.15
LPIN1-201ENST00000256720 CHIC2Q9UKJ5 165 aa14.07□□□□□ -0.16
LPIN1-201ENST00000256720 FHAD1B1AJZ9 1412 aa14.07□□□□□ -0.16
LPIN1-201ENST00000256720 CHGAP10645 457 aaKnown RBP14.05□□□□□ -0.16
LPIN1-201ENST00000256720 HMGXB3Q12766 1538 aa14.05□□□□□ -0.16
LPIN1-201ENST00000256720 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.05□□□□□ -0.168e-7■■■■□ 22.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms