RNA–Protein interactions for RNA: ENST00000256495.3

BHLHE40-201, Transcript of basic helix-loop-helix family member e40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BHLHE40, Length 3,473 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE40-201ENST00000256495 KRTAP3-1Q9BYR8 98 aa6.57□□□□□ -1.36
BHLHE40-201ENST00000256495 RPL37P61927 97 aaKnown RBP6.57□□□□□ -1.36
BHLHE40-201ENST00000256495 HERC1Q15751 4861 aa6.57□□□□□ -1.36
BHLHE40-201ENST00000256495 A6NN06 94 aa6.55□□□□□ -1.36
BHLHE40-201ENST00000256495 CDC42SE1Q9NRR8 79 aa6.54□□□□□ -1.36
BHLHE40-201ENST00000256495 COX6B2Q6YFQ2 88 aa6.52□□□□□ -1.37
BHLHE40-201ENST00000256495 KTN1-AS1Q86SY8 53 aa6.51□□□□□ -1.37
BHLHE40-201ENST00000256495 SPATA8Q6RVD6 105 aa6.48□□□□□ -1.37
BHLHE40-201ENST00000256495 A0A0D9SG42 100 aa6.48□□□□□ -1.37
BHLHE40-201ENST00000256495 PCLOQ9Y6V0 5065 aa6.47□□□□□ -1.37
BHLHE40-201ENST00000256495 MIR22HGQ0VDD5 57 aa6.46□□□□□ -1.38
BHLHE40-201ENST00000256495 UQCR11O14957 56 aa6.45□□□□□ -1.38
BHLHE40-201ENST00000256495 RNF213Q63HN8 5207 aa6.43□□□□□ -1.38
BHLHE40-201ENST00000256495 S4R3F8 94 aa6.42□□□□□ -1.38
BHLHE40-201ENST00000256495 RBM12B-AS1Q9P1G2 102 aa6.4□□□□□ -1.39
BHLHE40-201ENST00000256495 BIRC6Q9NR09 4857 aa6.4□□□□□ -1.39
BHLHE40-201ENST00000256495 A0A1B0GU33 70 aa6.38□□□□□ -1.39
BHLHE40-201ENST00000256495 TPRXLQ17RH7 258 aa6.37□□□□□ -1.39
BHLHE40-201ENST00000256495 LINC01554Q52M75 96 aa6.37□□□□□ -1.39
BHLHE40-201ENST00000256495 SEC61BP60468 96 aaKnown RBP6.31□□□□□ -1.4
BHLHE40-201ENST00000256495 FAT4Q6V0I7 4981 aa6.3□□□□□ -1.4
BHLHE40-201ENST00000256495 PRAC1Q96KF2 57 aa6.3□□□□□ -1.4
BHLHE40-201ENST00000256495 ADM2Q7Z4H4 148 aa6.3□□□□□ -1.4
BHLHE40-201ENST00000256495 P0C880 135 aa6.29□□□□□ -1.4
BHLHE40-201ENST00000256495 H1FX-AS1Q4G0G2 97 aa6.29□□□□□ -1.4
BHLHE40-201ENST00000256495 CRIPTQ9P021 101 aa6.29□□□□□ -1.4
BHLHE40-201ENST00000256495 UBR4Q5T4S7 5183 aa6.28□□□□□ -1.4
BHLHE40-201ENST00000256495 H0YAA0 97 aa6.27□□□□□ -1.41
BHLHE40-201ENST00000256495 CSAG1Q6PB30 78 aa6.26□□□□□ -1.41
BHLHE40-201ENST00000256495 KRTAP3-3Q9BYR6 98 aa6.25□□□□□ -1.41
BHLHE40-201ENST00000256495 KRTAP4-1Q9BYQ7 146 aa6.24□□□□□ -1.41
BHLHE40-201ENST00000256495 SPINT4Q6UDR6 99 aa6.24□□□□□ -1.41
BHLHE40-201ENST00000256495 KRTAP13-4Q3LI77 160 aa6.16□□□□□ -1.42
BHLHE40-201ENST00000256495 K7ERS5 55 aa6.16□□□□□ -1.42
BHLHE40-201ENST00000256495 M0R2T5 61 aa6.13□□□□□ -1.43
BHLHE40-201ENST00000256495 KRTAP10-6P60371 365 aaPredicted RBP6.13□□□□□ -1.43
BHLHE40-201ENST00000256495 M0QZ58 72 aa6.11□□□□□ -1.43
BHLHE40-201ENST00000256495 R4GN34 69 aa6.1□□□□□ -1.43
BHLHE40-201ENST00000256495 HMCN2Q8NDA2 5059 aa6.09□□□□□ -1.43
BHLHE40-201ENST00000256495 KRTAP3-2Q9BYR7 98 aa6.08□□□□□ -1.44
BHLHE40-201ENST00000256495 LORP23490 312 aaPredicted RBP6.01□□□□□ -1.45
BHLHE40-201ENST00000256495 MUC17Q685J3 4493 aa5.97□□□□□ -1.45
BHLHE40-201ENST00000256495 KRTAP12-2P59991 146 aa5.96□□□□□ -1.45
BHLHE40-201ENST00000256495 C10orf95Q9H7T3 257 aa5.91□□□□□ -1.46
BHLHE40-201ENST00000256495 CAMK2N1Q7Z7J9 78 aa5.86□□□□□ -1.47
BHLHE40-201ENST00000256495 KRTAP12-1P59990 96 aa5.84□□□□□ -1.47
BHLHE40-201ENST00000256495 ROMO1P60602 79 aa5.84□□□□□ -1.47
BHLHE40-201ENST00000256495 KRTAP25-1Q3LHN0 102 aa5.82□□□□□ -1.48
BHLHE40-201ENST00000256495 FSIP2Q5CZC0 6907 aa5.79□□□□□ -1.48
BHLHE40-201ENST00000256495 FLGP20930 4061 aaPredicted RBP5.76□□□□□ -1.49
BHLHE40-201ENST00000256495 KRTAP19-2Q3LHN2 52 aa5.75□□□□□ -1.49
BHLHE40-201ENST00000256495 KRTAP10-10P60014 251 aa5.75□□□□□ -1.49
BHLHE40-201ENST00000256495 LCE2CQ5TA81 110 aa5.66□□□□□ -1.5
BHLHE40-201ENST00000256495 USH2AO75445 5202 aa5.66□□□□□ -1.5
BHLHE40-201ENST00000256495 MT1HP80294 61 aa5.64□□□□□ -1.51
BHLHE40-201ENST00000256495 H3BS24 57 aa5.62□□□□□ -1.51
BHLHE40-201ENST00000256495 PLAC4Q8WY50 150 aa5.56□□□□□ -1.52
BHLHE40-201ENST00000256495 MT1FP04733 61 aa5.53□□□□□ -1.52
BHLHE40-201ENST00000256495 MT2AP02795 61 aa5.49□□□□□ -1.53
BHLHE40-201ENST00000256495 KRTAP15-1Q3LI76 137 aa5.42□□□□□ -1.54
BHLHE40-201ENST00000256495 KRTAP19-1Q8IUB9 90 aa5.42□□□□□ -1.54
BHLHE40-201ENST00000256495 KRTAP9-8Q9BYQ0 159 aa5.39□□□□□ -1.55
BHLHE40-201ENST00000256495 TNP1P09430 55 aa5.37□□□□□ -1.55
BHLHE40-201ENST00000256495 KMT2DO14686 5537 aa5.34□□□□□ -1.55
BHLHE40-201ENST00000256495 SPRR2GQ9BYE4 73 aa5.3□□□□□ -1.56
BHLHE40-201ENST00000256495 NDUFAF8A1L188 74 aa5.18□□□□□ -1.58
BHLHE40-201ENST00000256495 MT1BP07438 61 aa5.16□□□□□ -1.58
BHLHE40-201ENST00000256495 KRTAP9-3Q9BYQ3 159 aa5.16□□□□□ -1.58
BHLHE40-201ENST00000256495 LCE3AQ5TA76 89 aa5.14□□□□□ -1.59
BHLHE40-201ENST00000256495 LCE2BO14633 110 aa5.13□□□□□ -1.59
BHLHE40-201ENST00000256495 MT1XP80297 61 aa5.07□□□□□ -1.6
BHLHE40-201ENST00000256495 PP632Q6XCG6 107 aa5.07□□□□□ -1.6
BHLHE40-201ENST00000256495 KRTAP10-5P60370 271 aa5.06□□□□□ -1.6
BHLHE40-201ENST00000256495 KRTAP10-7P60409 375 aaPredicted RBP5.06□□□□□ -1.6
BHLHE40-201ENST00000256495 LCE2AQ5TA79 106 aaPredicted RBP5.05□□□□□ -1.6
BHLHE40-201ENST00000256495 KRTAP19-8Q3LI54 63 aa5.04□□□□□ -1.6
BHLHE40-201ENST00000256495 PRO2289Q9P1D8 64 aa5.03□□□□□ -1.6
BHLHE40-201ENST00000256495 KRTAP10-12P60413 245 aa5.01□□□□□ -1.61
BHLHE40-201ENST00000256495 SSPOA2VEC9 5147 aa5□□□□□ -1.61
BHLHE40-201ENST00000256495 LUZP6Q538Z0 58 aa4.99□□□□□ -1.61
BHLHE40-201ENST00000256495 KRTAP4-8A0A0G2JLE6 195 aa4.97□□□□□ -1.61
BHLHE40-201ENST00000256495 KRTAP4-8Q9BYQ9 185 aa4.97□□□□□ -1.61
BHLHE40-201ENST00000256495 A0A0A0MQY5 61 aa4.94□□□□□ -1.62
BHLHE40-201ENST00000256495 DSTQ03001 7570 aaKnown RBP4.93□□□□□ -1.62
BHLHE40-201ENST00000256495 KRTAP12-3P60328 96 aa4.88□□□□□ -1.63
BHLHE40-201ENST00000256495 KRTAP23-1A1A580 65 aa4.86□□□□□ -1.63
BHLHE40-201ENST00000256495 MUC12Q9UKN1 5478 aa4.84□□□□□ -1.64
BHLHE40-201ENST00000256495 SPRR5A0A1B0GTR4 108 aa4.82□□□□□ -1.64
BHLHE40-201ENST00000256495 KRTAP19-5Q3LI72 72 aa4.8□□□□□ -1.64
BHLHE40-201ENST00000256495 FCGBPQ9Y6R7 5405 aaPredicted RBP4.76□□□□□ -1.65
BHLHE40-201ENST00000256495 SYNE2Q8WXH0 6885 aaKnown RBP4.74□□□□□ -1.65
BHLHE40-201ENST00000256495 KRTAP8-1Q8IUC2 63 aa4.74□□□□□ -1.65
BHLHE40-201ENST00000256495 MACF1Q9UPN3 7388 aaKnown RBP4.71□□□□□ -1.66
BHLHE40-201ENST00000256495 OBSCNQ5VST9 7968 aa4.69□□□□□ -1.66
BHLHE40-201ENST00000256495 KRTAP4-7Q9BYR0 210 aa4.67□□□□□ -1.66
BHLHE40-201ENST00000256495 SYNE1Q8NF91 8797 aaKnown RBP4.6□□□□□ -1.67
BHLHE40-201ENST00000256495 CRCT1Q9UGL9 99 aa4.59□□□□□ -1.67
BHLHE40-201ENST00000256495 MDN1Q9NU22 5596 aa4.52□□□□□ -1.69
BHLHE40-201ENST00000256495 KRTAP19-7Q3SYF9 63 aa4.5□□□□□ -1.69
BHLHE40-201ENST00000256495 KRTAP19-6Q3LI70 58 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms