RNA–Protein interactions for RNA: ENST00000250489.8

TMEM55B-201, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-201ENST00000250489 MIR22HGQ0VDD5 57 aa12.98□□□□□ -0.33
TMEM55B-201ENST00000250489 A6NN06 94 aa12.96□□□□□ -0.33
TMEM55B-201ENST00000250489 TPRXLQ17RH7 258 aa12.95□□□□□ -0.34
TMEM55B-201ENST00000250489 BIRC6Q9NR09 4857 aa12.92□□□□□ -0.34
TMEM55B-201ENST00000250489 KRTAP3-3Q9BYR6 98 aa12.8□□□□□ -0.36
TMEM55B-201ENST00000250489 KTN1-AS1Q86SY8 53 aa12.75□□□□□ -0.37
TMEM55B-201ENST00000250489 ABCA13Q86UQ4 5058 aa12.75□□□□□ -0.37
TMEM55B-201ENST00000250489 A0A1B0GU33 70 aa12.74□□□□□ -0.37
TMEM55B-201ENST00000250489 S4R3F8 94 aa12.74□□□□□ -0.37
TMEM55B-201ENST00000250489 LRP2P98164 4655 aa12.73□□□□□ -0.37
TMEM55B-201ENST00000250489 H1FX-AS1Q4G0G2 97 aa12.73□□□□□ -0.37
TMEM55B-201ENST00000250489 H0YAA0 97 aa12.7□□□□□ -0.38
TMEM55B-201ENST00000250489 HERC2O95714 4834 aa12.69□□□□□ -0.38
TMEM55B-201ENST00000250489 LPAP08519 4548 aa12.67□□□□□ -0.38
TMEM55B-201ENST00000250489 J3QL48 77 aa12.58□□□□□ -0.4
TMEM55B-201ENST00000250489 RBM12B-AS1Q9P1G2 102 aa12.56□□□□□ -0.4
TMEM55B-201ENST00000250489 KRTAP10-6P60371 365 aaPredicted RBP12.55□□□□□ -0.4
TMEM55B-201ENST00000250489 KRTAP3-2Q9BYR7 98 aa12.51□□□□□ -0.41
TMEM55B-201ENST00000250489 SEC61BP60468 96 aaKnown RBP12.47□□□□□ -0.41
TMEM55B-201ENST00000250489 PCLOQ9Y6V0 5065 aa12.4□□□□□ -0.42
TMEM55B-201ENST00000250489 P0C880 135 aa12.35□□□□□ -0.43
TMEM55B-201ENST00000250489 CSAG1Q6PB30 78 aa12.34□□□□□ -0.43
TMEM55B-201ENST00000250489 KRTAP13-4Q3LI77 160 aa12.33□□□□□ -0.44
TMEM55B-201ENST00000250489 ADM2Q7Z4H4 148 aa12.32□□□□□ -0.44
TMEM55B-201ENST00000250489 MUC17Q685J3 4493 aa12.3□□□□□ -0.44
TMEM55B-201ENST00000250489 PRAC1Q96KF2 57 aa12.29□□□□□ -0.44
TMEM55B-201ENST00000250489 KRTAP4-1Q9BYQ7 146 aa12.28□□□□□ -0.44
TMEM55B-201ENST00000250489 K7ERS5 55 aa12.2□□□□□ -0.46
TMEM55B-201ENST00000250489 A0A0D9SG42 100 aa12.15□□□□□ -0.46
TMEM55B-201ENST00000250489 KRTAP19-2Q3LHN2 52 aa12.05□□□□□ -0.48
TMEM55B-201ENST00000250489 HERC1Q15751 4861 aa12.01□□□□□ -0.49
TMEM55B-201ENST00000250489 M0QZ58 72 aa11.99□□□□□ -0.49
TMEM55B-201ENST00000250489 KRTAP12-2P59991 146 aa11.89□□□□□ -0.51
TMEM55B-201ENST00000250489 ROMO1P60602 79 aa11.87□□□□□ -0.51
TMEM55B-201ENST00000250489 HMCN2Q8NDA2 5059 aa11.86□□□□□ -0.51
TMEM55B-201ENST00000250489 KRTAP12-1P59990 96 aa11.86□□□□□ -0.51
TMEM55B-201ENST00000250489 SPINT4Q6UDR6 99 aa11.79□□□□□ -0.52
TMEM55B-201ENST00000250489 KRTAP25-1Q3LHN0 102 aa11.77□□□□□ -0.53
TMEM55B-201ENST00000250489 R4GN34 69 aa11.76□□□□□ -0.53
TMEM55B-201ENST00000250489 MUC2Q02817 5179 aa11.73□□□□□ -0.53
TMEM55B-201ENST00000250489 LORP23490 312 aaPredicted RBP11.72□□□□□ -0.53
TMEM55B-201ENST00000250489 LINC01554Q52M75 96 aa11.72□□□□□ -0.53
TMEM55B-201ENST00000250489 FLGP20930 4061 aaPredicted RBP11.67□□□□□ -0.54
TMEM55B-201ENST00000250489 CRIPTQ9P021 101 aa11.67□□□□□ -0.54
TMEM55B-201ENST00000250489 LCE2CQ5TA81 110 aa11.48□□□□□ -0.57
TMEM55B-201ENST00000250489 C10orf95Q9H7T3 257 aa11.37□□□□□ -0.59
TMEM55B-201ENST00000250489 UBR4Q5T4S7 5183 aa11.33□□□□□ -0.6
TMEM55B-201ENST00000250489 RNF213Q63HN8 5207 aa11.31□□□□□ -0.6
TMEM55B-201ENST00000250489 FAT4Q6V0I7 4981 aa11.22□□□□□ -0.61
TMEM55B-201ENST00000250489 MT1HP80294 61 aa11.19□□□□□ -0.62
TMEM55B-201ENST00000250489 M0R2T5 61 aa11.13□□□□□ -0.63
TMEM55B-201ENST00000250489 CAMK2N1Q7Z7J9 78 aa11.1□□□□□ -0.63
TMEM55B-201ENST00000250489 SPRR2GQ9BYE4 73 aa11□□□□□ -0.65
TMEM55B-201ENST00000250489 KRTAP19-1Q8IUB9 90 aa10.95□□□□□ -0.66
TMEM55B-201ENST00000250489 MT2AP02795 61 aa10.92□□□□□ -0.66
TMEM55B-201ENST00000250489 MT1FP04733 61 aa10.89□□□□□ -0.67
TMEM55B-201ENST00000250489 KRTAP9-8Q9BYQ0 159 aa10.88□□□□□ -0.67
TMEM55B-201ENST00000250489 KRTAP10-10P60014 251 aa10.84□□□□□ -0.67
TMEM55B-201ENST00000250489 PLAC4Q8WY50 150 aa10.77□□□□□ -0.69
TMEM55B-201ENST00000250489 PP632Q6XCG6 107 aa10.68□□□□□ -0.7
TMEM55B-201ENST00000250489 TNP1P09430 55 aa10.66□□□□□ -0.7
TMEM55B-201ENST00000250489 KRTAP15-1Q3LI76 137 aa10.62□□□□□ -0.71
TMEM55B-201ENST00000250489 KRTAP19-8Q3LI54 63 aa10.6□□□□□ -0.71
TMEM55B-201ENST00000250489 KRTAP23-1A1A580 65 aa10.49□□□□□ -0.73
TMEM55B-201ENST00000250489 MT1BP07438 61 aa10.46□□□□□ -0.74
TMEM55B-201ENST00000250489 KRTAP9-3Q9BYQ3 159 aa10.45□□□□□ -0.74
TMEM55B-201ENST00000250489 KRTAP10-5P60370 271 aa10.27□□□□□ -0.77
TMEM55B-201ENST00000250489 MT1XP80297 61 aa10.26□□□□□ -0.77
TMEM55B-201ENST00000250489 H3BS24 57 aa10.26□□□□□ -0.77
TMEM55B-201ENST00000250489 LCE2AQ5TA79 106 aaPredicted RBP10.25□□□□□ -0.77
TMEM55B-201ENST00000250489 LCE3AQ5TA76 89 aa10.15□□□□□ -0.78
TMEM55B-201ENST00000250489 NDUFAF8A1L188 74 aa10.11□□□□□ -0.79
TMEM55B-201ENST00000250489 LCE2BO14633 110 aa10.08□□□□□ -0.8
TMEM55B-201ENST00000250489 PRO2289Q9P1D8 64 aa9.97□□□□□ -0.81
TMEM55B-201ENST00000250489 KRTAP8-1Q8IUC2 63 aa9.94□□□□□ -0.82
TMEM55B-201ENST00000250489 KRTAP10-12P60413 245 aa9.93□□□□□ -0.82
TMEM55B-201ENST00000250489 KRTAP10-7P60409 375 aaPredicted RBP9.92□□□□□ -0.82
TMEM55B-201ENST00000250489 SPRR5A0A1B0GTR4 108 aa9.81□□□□□ -0.84
TMEM55B-201ENST00000250489 LUZP6Q538Z0 58 aa9.75□□□□□ -0.85
TMEM55B-201ENST00000250489 KRTAP12-3P60328 96 aa9.7□□□□□ -0.86
TMEM55B-201ENST00000250489 USH2AO75445 5202 aa9.69□□□□□ -0.86
TMEM55B-201ENST00000250489 FSIP2Q5CZC0 6907 aa9.48□□□□□ -0.89
TMEM55B-201ENST00000250489 KRTAP19-5Q3LI72 72 aa9.44□□□□□ -0.9
TMEM55B-201ENST00000250489 KRTAP4-8A0A0G2JLE6 195 aa9.38□□□□□ -0.91
TMEM55B-201ENST00000250489 KRTAP4-8Q9BYQ9 185 aa9.38□□□□□ -0.91
TMEM55B-201ENST00000250489 LCE2DQ5TA82 110 aaPredicted RBP9.37□□□□□ -0.91
TMEM55B-201ENST00000250489 SSPOA2VEC9 5147 aa9.33□□□□□ -0.92
TMEM55B-201ENST00000250489 KRTAP9-2Q9BYQ4 174 aa9.32□□□□□ -0.92
TMEM55B-201ENST00000250489 KMT2DO14686 5537 aa9.31□□□□□ -0.92
TMEM55B-201ENST00000250489 KRTAP19-6Q3LI70 58 aa9.23□□□□□ -0.93
TMEM55B-201ENST00000250489 KRTAP19-7Q3SYF9 63 aa9.16□□□□□ -0.94
TMEM55B-201ENST00000250489 LCE3CQ5T5A8 94 aa9.11□□□□□ -0.95
TMEM55B-201ENST00000250489 A0A0A0MQY5 61 aa8.96□□□□□ -0.98
TMEM55B-201ENST00000250489 MT1EP04732 61 aa8.93□□□□□ -0.98
TMEM55B-201ENST00000250489 CRCT1Q9UGL9 99 aa8.9□□□□□ -0.98
TMEM55B-201ENST00000250489 MT1LQ93083 61 aa8.86□□□□□ -0.99
TMEM55B-201ENST00000250489 KRTAP19-4Q3LI73 84 aa8.84□□□□□ -0.99
TMEM55B-201ENST00000250489 FCGBPQ9Y6R7 5405 aaPredicted RBP8.82□□□□□ -1
TMEM55B-201ENST00000250489 KRTAP4-7Q9BYR0 210 aa8.77□□□□□ -1.01
TMEM55B-201ENST00000250489 KRTAP9-6A8MVA2 160 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms