RNA–Protein interactions for RNA: ENST00000249269.8

PMPCB-201, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMPCB, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-201ENST00000249269 PKD1P98161 4303 aa7.72□□□□□ -1.17
PMPCB-201ENST00000249269 C9orf92A6NGG3 77 aa7.72□□□□□ -1.17
PMPCB-201ENST00000249269 RPL37P61927 97 aaKnown RBP7.7□□□□□ -1.18
PMPCB-201ENST00000249269 KRTAP10-4P60372 401 aaPredicted RBP7.63□□□□□ -1.19
PMPCB-201ENST00000249269 VPS13BQ7Z7G8 4022 aa7.62□□□□□ -1.19
PMPCB-201ENST00000249269 FAT2Q9NYQ8 4349 aa7.61□□□□□ -1.19
PMPCB-201ENST00000249269 KRTAP10-6P60371 365 aaPredicted RBP7.6□□□□□ -1.19
PMPCB-201ENST00000249269 INE1O15225 51 aa7.57□□□□□ -1.2
PMPCB-201ENST00000249269 PKHD1L1Q86WI1 4243 aa7.55□□□□□ -1.2
PMPCB-201ENST00000249269 LCE2AQ5TA79 106 aaPredicted RBP7.54□□□□□ -1.2
PMPCB-201ENST00000249269 A0A1B0GVY2 172 aa7.53□□□□□ -1.2
PMPCB-201ENST00000249269 S4R3F8 94 aa7.52□□□□□ -1.21
PMPCB-201ENST00000249269 SMR3BP02814 79 aaPredicted RBP7.48□□□□□ -1.21
PMPCB-201ENST00000249269 XP32Q5T750 250 aa7.46□□□□□ -1.21
PMPCB-201ENST00000249269 LCE2CQ5TA81 110 aa7.46□□□□□ -1.21
PMPCB-201ENST00000249269 PKHD1P08F94 4074 aa7.44□□□□□ -1.22
PMPCB-201ENST00000249269 KRTAP13-4Q3LI77 160 aa7.43□□□□□ -1.22
PMPCB-201ENST00000249269 APOBP04114 4563 aaKnown RBP7.42□□□□□ -1.22
PMPCB-201ENST00000249269 KRTAP21-3Q3LHN1 58 aa7.41□□□□□ -1.22
PMPCB-201ENST00000249269 LCE2DQ5TA82 110 aaPredicted RBP7.4□□□□□ -1.23
PMPCB-201ENST00000249269 M0QZ58 72 aa7.38□□□□□ -1.23
PMPCB-201ENST00000249269 HYDINQ4G0P3 5121 aa7.37□□□□□ -1.23
PMPCB-201ENST00000249269 A0A0D9SG42 100 aa7.35□□□□□ -1.23
PMPCB-201ENST00000249269 DYNC1H1Q14204 4646 aaKnown RBP7.29□□□□□ -1.24
PMPCB-201ENST00000249269 KRTAP12-1P59990 96 aa7.28□□□□□ -1.24
PMPCB-201ENST00000249269 KRTAP12-2P59991 146 aa7.26□□□□□ -1.25
PMPCB-201ENST00000249269 FAT3Q8TDW7 4589 aa7.2□□□□□ -1.26
PMPCB-201ENST00000249269 TNXBP22105 4242 aa7.2□□□□□ -1.26
PMPCB-201ENST00000249269 FAT1Q14517 4588 aa7.16□□□□□ -1.26
PMPCB-201ENST00000249269 LRP1Q07954 4544 aaKnown RBP7.15□□□□□ -1.27
PMPCB-201ENST00000249269 DNHD1Q96M86 4753 aa7.15□□□□□ -1.27
PMPCB-201ENST00000249269 Q5VSD8 79 aa7.14□□□□□ -1.27
PMPCB-201ENST00000249269 HSPG2P98160 4391 aa7.12□□□□□ -1.27
PMPCB-201ENST00000249269 DMBT1Q9UGM3 2413 aaPredicted RBP7.05□□□□□ -1.28
PMPCB-201ENST00000249269 PP632Q6XCG6 107 aa7.04□□□□□ -1.28
PMPCB-201ENST00000249269 MT1HL1P0DM35 61 aa7.01□□□□□ -1.29
PMPCB-201ENST00000249269 LCE2BO14633 110 aa7□□□□□ -1.29
PMPCB-201ENST00000249269 RYR2Q92736 4967 aa6.89□□□□□ -1.31
PMPCB-201ENST00000249269 LORP23490 312 aaPredicted RBP6.83□□□□□ -1.32
PMPCB-201ENST00000249269 SPRR5A0A1B0GTR4 108 aa6.82□□□□□ -1.32
PMPCB-201ENST00000249269 MYCBP2O75592 4640 aa6.77□□□□□ -1.33
PMPCB-201ENST00000249269 RYR1P21817 5038 aa6.72□□□□□ -1.33
PMPCB-201ENST00000249269 KRTAP17-1Q9BYP8 105 aa6.67□□□□□ -1.34
PMPCB-201ENST00000249269 KMT2CQ8NEZ4 4911 aaKnown RBP6.58□□□□□ -1.36
PMPCB-201ENST00000249269 KRTAP19-2Q3LHN2 52 aa6.55□□□□□ -1.36
PMPCB-201ENST00000249269 LRP2P98164 4655 aa6.54□□□□□ -1.36
PMPCB-201ENST00000249269 TNP1P09430 55 aa6.51□□□□□ -1.37
PMPCB-201ENST00000249269 LPAP08519 4548 aa6.51□□□□□ -1.37
PMPCB-201ENST00000249269 MUC17Q685J3 4493 aa6.47□□□□□ -1.37
PMPCB-201ENST00000249269 KRTAP4-1Q9BYQ7 146 aa6.46□□□□□ -1.38
PMPCB-201ENST00000249269 RYR3Q15413 4870 aa6.43□□□□□ -1.38
PMPCB-201ENST00000249269 KIAA1109Q2LD37 5005 aa6.37□□□□□ -1.39
PMPCB-201ENST00000249269 KRTAP2-2Q9BYT5 123 aa6.29□□□□□ -1.4
PMPCB-201ENST00000249269 KRTAP4-5Q9BYR2 181 aa6.26□□□□□ -1.41
PMPCB-201ENST00000249269 SPRR2GQ9BYE4 73 aa6.24□□□□□ -1.41
PMPCB-201ENST00000249269 HERC1Q15751 4861 aa6.22□□□□□ -1.41
PMPCB-201ENST00000249269 ABCA13Q86UQ4 5058 aa6.19□□□□□ -1.42
PMPCB-201ENST00000249269 FLGP20930 4061 aaPredicted RBP6.13□□□□□ -1.43
PMPCB-201ENST00000249269 KRTAP19-1Q8IUB9 90 aa6.04□□□□□ -1.44
PMPCB-201ENST00000249269 KRTAP8-1Q8IUC2 63 aa6.02□□□□□ -1.45
PMPCB-201ENST00000249269 LCE5AQ5TCM9 118 aa6.02□□□□□ -1.45
PMPCB-201ENST00000249269 EPPK1P58107 5090 aaKnown RBP6.01□□□□□ -1.45
PMPCB-201ENST00000249269 BIRC6Q9NR09 4857 aa6.01□□□□□ -1.45
PMPCB-201ENST00000249269 KRTAP10-10P60014 251 aa6□□□□□ -1.45
PMPCB-201ENST00000249269 LCE3AQ5TA76 89 aa5.97□□□□□ -1.45
PMPCB-201ENST00000249269 KRTAP19-8Q3LI54 63 aa5.94□□□□□ -1.46
PMPCB-201ENST00000249269 MT1HP80294 61 aa5.82□□□□□ -1.48
PMPCB-201ENST00000249269 M0R2T5 61 aa5.82□□□□□ -1.48
PMPCB-201ENST00000249269 HERC2O95714 4834 aa5.82□□□□□ -1.48
PMPCB-201ENST00000249269 MT2AP02795 61 aa5.81□□□□□ -1.48
PMPCB-201ENST00000249269 MT1FP04733 61 aa5.77□□□□□ -1.49
PMPCB-201ENST00000249269 KRTAP12-3P60328 96 aa5.76□□□□□ -1.49
PMPCB-201ENST00000249269 KRTAP9-8Q9BYQ0 159 aa5.75□□□□□ -1.49
PMPCB-201ENST00000249269 KRTAP10-5P60370 271 aa5.74□□□□□ -1.49
PMPCB-201ENST00000249269 KRTAP10-12P60413 245 aa5.73□□□□□ -1.49
PMPCB-201ENST00000249269 LCE1AQ5T7P2 110 aa5.73□□□□□ -1.49
PMPCB-201ENST00000249269 MT1XP80297 61 aa5.71□□□□□ -1.49
PMPCB-201ENST00000249269 LCE1FQ5T754 118 aa5.7□□□□□ -1.5
PMPCB-201ENST00000249269 MT1BP07438 61 aa5.7□□□□□ -1.5
PMPCB-201ENST00000249269 PCLOQ9Y6V0 5065 aa5.68□□□□□ -1.5
PMPCB-201ENST00000249269 KRTAP6-3Q3LI67 103 aa5.62□□□□□ -1.51
PMPCB-201ENST00000249269 HMCN2Q8NDA2 5059 aa5.62□□□□□ -1.51
PMPCB-201ENST00000249269 LCE1EQ5T753 118 aa5.61□□□□□ -1.51
PMPCB-201ENST00000249269 MUC2Q02817 5179 aa5.6□□□□□ -1.51
PMPCB-201ENST00000249269 KRTAP19-4Q3LI73 84 aa5.56□□□□□ -1.52
PMPCB-201ENST00000249269 KRTAP9-3Q9BYQ3 159 aa5.52□□□□□ -1.53
PMPCB-201ENST00000249269 KRTAP9-4Q9BYQ2 154 aa5.5□□□□□ -1.53
PMPCB-201ENST00000249269 KRTAP10-7P60409 375 aaPredicted RBP5.48□□□□□ -1.53
PMPCB-201ENST00000249269 LCE3CQ5T5A8 94 aa5.47□□□□□ -1.53
PMPCB-201ENST00000249269 LCE1DQ5T752 114 aa5.38□□□□□ -1.55
PMPCB-201ENST00000249269 FAT4Q6V0I7 4981 aa5.36□□□□□ -1.55
PMPCB-201ENST00000249269 KRTAP19-5Q3LI72 72 aa5.35□□□□□ -1.55
PMPCB-201ENST00000249269 UBR4Q5T4S7 5183 aa5.35□□□□□ -1.55
PMPCB-201ENST00000249269 KRTAP12-4P60329 112 aa5.34□□□□□ -1.55
PMPCB-201ENST00000249269 KRTAP9-6A0A140TA67 174 aa5.33□□□□□ -1.56
PMPCB-201ENST00000249269 RNF213Q63HN8 5207 aa5.32□□□□□ -1.56
PMPCB-201ENST00000249269 KRTAP2-3P0C7H8 128 aa5.25□□□□□ -1.57
PMPCB-201ENST00000249269 KRTAP2-4Q9BYR9 128 aa5.25□□□□□ -1.57
PMPCB-201ENST00000249269 KRTAP2-1Q9BYU5 128 aa5.25□□□□□ -1.57
PMPCB-201ENST00000249269 KRTAP9-9Q9BYP9 154 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms