RNA–Protein interactions for RNA: ENST00000243077.7

LRP1-201, Transcript of LDL receptor related protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP1, Length 14,897 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-201ENST00000243077 VPS13BQ7Z7G8 4022 aa4.05□□□□□ -1.76
LRP1-201ENST00000243077 KRTAP10-12P60413 245 aa4.05□□□□□ -1.76
LRP1-201ENST00000243077 MUC3AQ02505 3323 aa4.04□□□□□ -1.76
LRP1-201ENST00000243077 KRTAP3-3Q9BYR6 98 aa4.02□□□□□ -1.77
LRP1-201ENST00000243077 CSMD3Q7Z407 3707 aa4.02□□□□□ -1.77
LRP1-201ENST00000243077 CUBNO60494 3623 aa4.01□□□□□ -1.77
LRP1-201ENST00000243077 KRTAP19-4Q3LI73 84 aa3.99□□□□□ -1.77
LRP1-201ENST00000243077 SVEP1Q4LDE5 3571 aa3.98□□□□□ -1.77
LRP1-201ENST00000243077 DNAH17Q9UFH2 4485 aa3.98□□□□□ -1.77
LRP1-201ENST00000243077 KRTAP12-3P60328 96 aa3.97□□□□□ -1.77
LRP1-201ENST00000243077 PRKDCP78527 4128 aaKnown RBP3.95□□□□□ -1.78
LRP1-201ENST00000243077 DNAH9Q9NYC9 4486 aa3.95□□□□□ -1.78
LRP1-201ENST00000243077 VPS13DQ5THJ4 4388 aa3.94□□□□□ -1.78
LRP1-201ENST00000243077 MT1HL1P0DM35 61 aa3.93□□□□□ -1.78
LRP1-201ENST00000243077 KMT2AQ03164 3969 aa3.93□□□□□ -1.78
LRP1-201ENST00000243077 HECTD4Q9Y4D8 3996 aa3.93□□□□□ -1.78
LRP1-201ENST00000243077 LYSTQ99698 3801 aa3.87□□□□□ -1.79
LRP1-201ENST00000243077 FAT2Q9NYQ8 4349 aa3.84□□□□□ -1.79
LRP1-201ENST00000243077 KRTAP10-4P60372 401 aaPredicted RBP3.83□□□□□ -1.8
LRP1-201ENST00000243077 DYNC2H1Q8NCM8 4307 aaKnown RBP3.82□□□□□ -1.8
LRP1-201ENST00000243077 DNAH8Q96JB1 4490 aa3.81□□□□□ -1.8
LRP1-201ENST00000243077 PLECQ15149 4684 aaKnown RBP3.81□□□□□ -1.8
LRP1-201ENST00000243077 CSMD2Q7Z408 3487 aa3.79□□□□□ -1.8
LRP1-201ENST00000243077 FLGP20930 4061 aaPredicted RBP3.79□□□□□ -1.8
LRP1-201ENST00000243077 LCE3AQ5TA76 89 aa3.75□□□□□ -1.81
LRP1-201ENST00000243077 DNAH5Q8TE73 4624 aa3.7□□□□□ -1.82
LRP1-201ENST00000243077 LRP1Q07954 4544 aaKnown RBP3.69□□□□□ -1.82
LRP1-201ENST00000243077 SACSQ9NZJ4 4579 aa3.68□□□□□ -1.82
LRP1-201ENST00000243077 PKHD1L1Q86WI1 4243 aa3.67□□□□□ -1.82
LRP1-201ENST00000243077 SPRR2GQ9BYE4 73 aa3.66□□□□□ -1.82
LRP1-201ENST00000243077 DYNC1H1Q14204 4646 aaKnown RBP3.65□□□□□ -1.83
LRP1-201ENST00000243077 LRP1BQ9NZR2 4599 aa3.63□□□□□ -1.83
LRP1-201ENST00000243077 KRTAP8-1Q8IUC2 63 aa3.63□□□□□ -1.83
LRP1-201ENST00000243077 APOBP04114 4563 aaKnown RBP3.61□□□□□ -1.83
LRP1-201ENST00000243077 KRTAP10-5P60370 271 aa3.6□□□□□ -1.83
LRP1-201ENST00000243077 PKD1P98161 4303 aa3.59□□□□□ -1.84
LRP1-201ENST00000243077 FAT1Q14517 4588 aa3.58□□□□□ -1.84
LRP1-201ENST00000243077 CRCT1Q9UGL9 99 aa3.56□□□□□ -1.84
LRP1-201ENST00000243077 FAT3Q8TDW7 4589 aa3.55□□□□□ -1.84
LRP1-201ENST00000243077 LORP23490 312 aaPredicted RBP3.51□□□□□ -1.85
LRP1-201ENST00000243077 PKHD1P08F94 4074 aa3.51□□□□□ -1.85
LRP1-201ENST00000243077 LCE3CQ5T5A8 94 aa3.51□□□□□ -1.85
LRP1-201ENST00000243077 KRTAP10-7P60409 375 aaPredicted RBP3.48□□□□□ -1.85
LRP1-201ENST00000243077 KRTAP4-5Q9BYR2 181 aa3.45□□□□□ -1.86
LRP1-201ENST00000243077 HSPG2P98160 4391 aa3.43□□□□□ -1.86
LRP1-201ENST00000243077 TNXBP22105 4242 aa3.42□□□□□ -1.86
LRP1-201ENST00000243077 MT1HP80294 61 aa3.42□□□□□ -1.86
LRP1-201ENST00000243077 MYCBP2O75592 4640 aa3.41□□□□□ -1.86
LRP1-201ENST00000243077 KRTAP19-5Q3LI72 72 aa3.37□□□□□ -1.87
LRP1-201ENST00000243077 MT2AP02795 61 aa3.37□□□□□ -1.87
LRP1-201ENST00000243077 STARD9Q9P2P6 4700 aa3.36□□□□□ -1.87
LRP1-201ENST00000243077 KRTAP19-8Q3LI54 63 aa3.34□□□□□ -1.87
LRP1-201ENST00000243077 SPRR5A0A1B0GTR4 108 aa3.29□□□□□ -1.88
LRP1-201ENST00000243077 KRTAP4-1Q9BYQ7 146 aa3.29□□□□□ -1.88
LRP1-201ENST00000243077 MT1FP04733 61 aa3.24□□□□□ -1.89
LRP1-201ENST00000243077 SPRR2FQ96RM1 72 aa3.23□□□□□ -1.89
LRP1-201ENST00000243077 RYR1P21817 5038 aa3.22□□□□□ -1.89
LRP1-201ENST00000243077 KRTAP12-4P60329 112 aa3.2□□□□□ -1.9
LRP1-201ENST00000243077 MT1GP13640 62 aa3.18□□□□□ -1.9
LRP1-201ENST00000243077 RYR3Q15413 4870 aa3.18□□□□□ -1.9
LRP1-201ENST00000243077 KRTAP19-1Q8IUB9 90 aa3.17□□□□□ -1.9
LRP1-201ENST00000243077 MT1XP80297 61 aa3.13□□□□□ -1.91
LRP1-201ENST00000243077 DNHD1Q96M86 4753 aa3.11□□□□□ -1.91
LRP1-201ENST00000243077 LCE3DQ9BYE3 92 aa3.08□□□□□ -1.92
LRP1-201ENST00000243077 MT1LQ93083 61 aa3.08□□□□□ -1.92
LRP1-201ENST00000243077 MT3P25713 68 aa3.08□□□□□ -1.92
LRP1-201ENST00000243077 LCE3EQ5T5B0 92 aa3.07□□□□□ -1.92
LRP1-201ENST00000243077 RYR2Q92736 4967 aa3.06□□□□□ -1.92
LRP1-201ENST00000243077 LCE2BO14633 110 aa3.05□□□□□ -1.92
LRP1-201ENST00000243077 BIRC6Q9NR09 4857 aa3.04□□□□□ -1.92
LRP1-201ENST00000243077 KRTAP9-8Q9BYQ0 159 aa3.03□□□□□ -1.92
LRP1-201ENST00000243077 SPRR2EP22531 72 aa3.02□□□□□ -1.93
LRP1-201ENST00000243077 SPRR2BP35325 72 aa3.02□□□□□ -1.93
LRP1-201ENST00000243077 SPRR2AP35326 72 aa3.02□□□□□ -1.93
LRP1-201ENST00000243077 LCE3BQ5TA77 95 aa3.01□□□□□ -1.93
LRP1-201ENST00000243077 MT1BP07438 61 aa3□□□□□ -1.93
LRP1-201ENST00000243077 KRTAP9-3Q9BYQ3 159 aa2.98□□□□□ -1.93
LRP1-201ENST00000243077 MT1EP04732 61 aa2.96□□□□□ -1.94
LRP1-201ENST00000243077 SPRR2DP22532 72 aa2.95□□□□□ -1.94
LRP1-201ENST00000243077 KRTAP19-3Q7Z4W3 81 aa2.95□□□□□ -1.94
LRP1-201ENST00000243077 MUC17Q685J3 4493 aa2.94□□□□□ -1.94
LRP1-201ENST00000243077 HERC2O95714 4834 aa2.94□□□□□ -1.94
LRP1-201ENST00000243077 LRP2P98164 4655 aa2.92□□□□□ -1.94
LRP1-201ENST00000243077 KMT2CQ8NEZ4 4911 aaKnown RBP2.89□□□□□ -1.95
LRP1-201ENST00000243077 LCE2CQ5TA81 110 aa2.85□□□□□ -1.95
LRP1-201ENST00000243077 MT1MQ8N339 61 aa2.82□□□□□ -1.96
LRP1-201ENST00000243077 PCLOQ9Y6V0 5065 aa2.82□□□□□ -1.96
LRP1-201ENST00000243077 HERC1Q15751 4861 aa2.8□□□□□ -1.96
LRP1-201ENST00000243077 KRTAP4-8A0A0G2JLE6 195 aa2.78□□□□□ -1.96
LRP1-201ENST00000243077 KRTAP4-8Q9BYQ9 185 aa2.78□□□□□ -1.96
LRP1-201ENST00000243077 MT1AP04731 61 aa2.75□□□□□ -1.97
LRP1-201ENST00000243077 KRTAP19-6Q3LI70 58 aa2.75□□□□□ -1.97
LRP1-201ENST00000243077 HYDINQ4G0P3 5121 aa2.74□□□□□ -1.97
LRP1-201ENST00000243077 LCE2DQ5TA82 110 aaPredicted RBP2.74□□□□□ -1.97
LRP1-201ENST00000243077 KRTAP2-3P0C7H8 128 aa2.72□□□□□ -1.97
LRP1-201ENST00000243077 KRTAP2-4Q9BYR9 128 aa2.72□□□□□ -1.97
LRP1-201ENST00000243077 KRTAP2-1Q9BYU5 128 aa2.72□□□□□ -1.97
LRP1-201ENST00000243077 PRM1P04553 51 aa2.7□□□□□ -1.98
LRP1-201ENST00000243077 KRTAP19-2Q3LHN2 52 aa2.7□□□□□ -1.98
LRP1-201ENST00000243077 HMCN2Q8NDA2 5059 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms