RNA–Protein interactions for RNA: ENST00000243052.7

PDE1B-201, Transcript of phosphodiesterase 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE1B, Length 3,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-201ENST00000243052 PKD1P98161 4303 aa8.36□□□□□ -1.07
PDE1B-201ENST00000243052 KRTAP10-6P60371 365 aaPredicted RBP8.35□□□□□ -1.07
PDE1B-201ENST00000243052 KRTAP12-2P59991 146 aa8.32□□□□□ -1.08
PDE1B-201ENST00000243052 RPS29P62273 56 aaKnown RBP8.31□□□□□ -1.08
PDE1B-201ENST00000243052 LUZP6Q538Z0 58 aa8.29□□□□□ -1.08
PDE1B-201ENST00000243052 DYNC1H1Q14204 4646 aaKnown RBP8.26□□□□□ -1.09
PDE1B-201ENST00000243052 KRTAP3-2Q9BYR7 98 aa8.19□□□□□ -1.1
PDE1B-201ENST00000243052 KRTAP3-3Q9BYR6 98 aa8.18□□□□□ -1.1
PDE1B-201ENST00000243052 SACSQ9NZJ4 4579 aa8.16□□□□□ -1.1
PDE1B-201ENST00000243052 KRTAP10-4P60372 401 aaPredicted RBP8.13□□□□□ -1.11
PDE1B-201ENST00000243052 MYCBP2O75592 4640 aa8.12□□□□□ -1.11
PDE1B-201ENST00000243052 A0A1B0GVY2 172 aa8.12□□□□□ -1.11
PDE1B-201ENST00000243052 KRTAP12-1P59990 96 aa8.11□□□□□ -1.11
PDE1B-201ENST00000243052 LRP1Q07954 4544 aaKnown RBP8.09□□□□□ -1.11
PDE1B-201ENST00000243052 KRTAP10-8P60410 259 aa8.09□□□□□ -1.12
PDE1B-201ENST00000243052 Q5VSD8 79 aa8.09□□□□□ -1.12
PDE1B-201ENST00000243052 PLAC4Q8WY50 150 aa8.02□□□□□ -1.13
PDE1B-201ENST00000243052 APOBP04114 4563 aaKnown RBP8.02□□□□□ -1.13
PDE1B-201ENST00000243052 XP32Q5T750 250 aa8.01□□□□□ -1.13
PDE1B-201ENST00000243052 KMT2CQ8NEZ4 4911 aaKnown RBP7.98□□□□□ -1.13
PDE1B-201ENST00000243052 M0QZ58 72 aa7.92□□□□□ -1.14
PDE1B-201ENST00000243052 HSPG2P98160 4391 aa7.88□□□□□ -1.15
PDE1B-201ENST00000243052 PKHD1L1Q86WI1 4243 aa7.87□□□□□ -1.15
PDE1B-201ENST00000243052 R4GN34 69 aa7.85□□□□□ -1.15
PDE1B-201ENST00000243052 FAT3Q8TDW7 4589 aa7.84□□□□□ -1.15
PDE1B-201ENST00000243052 RYR2Q92736 4967 aa7.79□□□□□ -1.16
PDE1B-201ENST00000243052 KRTAP17-1Q9BYP8 105 aa7.75□□□□□ -1.17
PDE1B-201ENST00000243052 KIAA1109Q2LD37 5005 aa7.74□□□□□ -1.17
PDE1B-201ENST00000243052 KRTAP21-3Q3LHN1 58 aa7.74□□□□□ -1.17
PDE1B-201ENST00000243052 LPAP08519 4548 aa7.69□□□□□ -1.18
PDE1B-201ENST00000243052 TNXBP22105 4242 aa7.68□□□□□ -1.18
PDE1B-201ENST00000243052 LRP2P98164 4655 aa7.68□□□□□ -1.18
PDE1B-201ENST00000243052 MT1HL1P0DM35 61 aa7.67□□□□□ -1.18
PDE1B-201ENST00000243052 CAMK2N1Q7Z7J9 78 aa7.65□□□□□ -1.19
PDE1B-201ENST00000243052 RYR1P21817 5038 aa7.63□□□□□ -1.19
PDE1B-201ENST00000243052 RYR3Q15413 4870 aa7.63□□□□□ -1.19
PDE1B-201ENST00000243052 LORP23490 312 aaPredicted RBP7.51□□□□□ -1.21
PDE1B-201ENST00000243052 KRTAP4-5Q9BYR2 181 aa7.47□□□□□ -1.21
PDE1B-201ENST00000243052 EPPK1P58107 5090 aaKnown RBP7.47□□□□□ -1.21
PDE1B-201ENST00000243052 J3QL48 77 aa7.45□□□□□ -1.22
PDE1B-201ENST00000243052 ABCA13Q86UQ4 5058 aa7.41□□□□□ -1.22
PDE1B-201ENST00000243052 SEC61BP60468 96 aaKnown RBP7.39□□□□□ -1.23
PDE1B-201ENST00000243052 PP632Q6XCG6 107 aa7.38□□□□□ -1.23
PDE1B-201ENST00000243052 KRTAP4-1Q9BYQ7 146 aa7.28□□□□□ -1.24
PDE1B-201ENST00000243052 TNP1P09430 55 aa7.2□□□□□ -1.26
PDE1B-201ENST00000243052 MUC2Q02817 5179 aa7.17□□□□□ -1.26
PDE1B-201ENST00000243052 HERC2O95714 4834 aa7.08□□□□□ -1.28
PDE1B-201ENST00000243052 PRO2289Q9P1D8 64 aa7□□□□□ -1.29
PDE1B-201ENST00000243052 MUC17Q685J3 4493 aa6.98□□□□□ -1.29
PDE1B-201ENST00000243052 HERC1Q15751 4861 aa6.95□□□□□ -1.3
PDE1B-201ENST00000243052 M0R2T5 61 aa6.95□□□□□ -1.3
PDE1B-201ENST00000243052 SPRR5A0A1B0GTR4 108 aa6.9□□□□□ -1.31
PDE1B-201ENST00000243052 KRTAP19-2Q3LHN2 52 aa6.86□□□□□ -1.31
PDE1B-201ENST00000243052 RNF213Q63HN8 5207 aa6.86□□□□□ -1.31
PDE1B-201ENST00000243052 PCLOQ9Y6V0 5065 aa6.83□□□□□ -1.32
PDE1B-201ENST00000243052 FAT4Q6V0I7 4981 aa6.81□□□□□ -1.32
PDE1B-201ENST00000243052 LCE3AQ5TA76 89 aa6.73□□□□□ -1.33
PDE1B-201ENST00000243052 INE1O15225 51 aa6.72□□□□□ -1.33
PDE1B-201ENST00000243052 BIRC6Q9NR09 4857 aa6.68□□□□□ -1.34
PDE1B-201ENST00000243052 FLGP20930 4061 aaPredicted RBP6.67□□□□□ -1.34
PDE1B-201ENST00000243052 UBR4Q5T4S7 5183 aa6.66□□□□□ -1.34
PDE1B-201ENST00000243052 KRTAP23-1A1A580 65 aa6.66□□□□□ -1.34
PDE1B-201ENST00000243052 KRTAP10-10P60014 251 aa6.64□□□□□ -1.35
PDE1B-201ENST00000243052 KRTAP19-1Q8IUB9 90 aa6.51□□□□□ -1.37
PDE1B-201ENST00000243052 LCE2CQ5TA81 110 aa6.51□□□□□ -1.37
PDE1B-201ENST00000243052 HMCN2Q8NDA2 5059 aa6.46□□□□□ -1.38
PDE1B-201ENST00000243052 SPRR2GQ9BYE4 73 aa6.45□□□□□ -1.38
PDE1B-201ENST00000243052 MT1HP80294 61 aa6.43□□□□□ -1.38
PDE1B-201ENST00000243052 MT1FP04733 61 aa6.43□□□□□ -1.38
PDE1B-201ENST00000243052 MT2AP02795 61 aa6.38□□□□□ -1.39
PDE1B-201ENST00000243052 KRTAP12-3P60328 96 aa6.35□□□□□ -1.39
PDE1B-201ENST00000243052 KRTAP8-1Q8IUC2 63 aa6.28□□□□□ -1.4
PDE1B-201ENST00000243052 KRTAP9-8Q9BYQ0 159 aa6.24□□□□□ -1.41
PDE1B-201ENST00000243052 KRTAP10-12P60413 245 aa6.22□□□□□ -1.41
PDE1B-201ENST00000243052 FSIP2Q5CZC0 6907 aa6.21□□□□□ -1.42
PDE1B-201ENST00000243052 KRTAP10-5P60370 271 aa6.15□□□□□ -1.42
PDE1B-201ENST00000243052 MT1BP07438 61 aa6.15□□□□□ -1.42
PDE1B-201ENST00000243052 MT1XP80297 61 aa6.15□□□□□ -1.42
PDE1B-201ENST00000243052 KRTAP10-7P60409 375 aaPredicted RBP6.12□□□□□ -1.43
PDE1B-201ENST00000243052 KRTAP19-8Q3LI54 63 aa6.09□□□□□ -1.44
PDE1B-201ENST00000243052 KMT2DO14686 5537 aa6.08□□□□□ -1.44
PDE1B-201ENST00000243052 USH2AO75445 5202 aa6.06□□□□□ -1.44
PDE1B-201ENST00000243052 KRTAP9-3Q9BYQ3 159 aa5.95□□□□□ -1.46
PDE1B-201ENST00000243052 LCE3CQ5T5A8 94 aa5.91□□□□□ -1.46
PDE1B-201ENST00000243052 OBSCNQ5VST9 7968 aa5.91□□□□□ -1.46
PDE1B-201ENST00000243052 KRTAP19-5Q3LI72 72 aa5.9□□□□□ -1.46
PDE1B-201ENST00000243052 KRTAP4-8A0A0G2JLE6 195 aa5.84□□□□□ -1.48
PDE1B-201ENST00000243052 KRTAP4-8Q9BYQ9 185 aa5.84□□□□□ -1.48
PDE1B-201ENST00000243052 KRTAP9-6A8MVA2 160 aa5.8□□□□□ -1.48
PDE1B-201ENST00000243052 LCE2BO14633 110 aa5.8□□□□□ -1.48
PDE1B-201ENST00000243052 KRTAP4-7Q9BYR0 210 aa5.77□□□□□ -1.49
PDE1B-201ENST00000243052 CRCT1Q9UGL9 99 aa5.76□□□□□ -1.49
PDE1B-201ENST00000243052 SYNE1Q8NF91 8797 aaKnown RBP5.71□□□□□ -1.49
PDE1B-201ENST00000243052 DSTQ03001 7570 aaKnown RBP5.66□□□□□ -1.5
PDE1B-201ENST00000243052 FCGBPQ9Y6R7 5405 aaPredicted RBP5.59□□□□□ -1.51
PDE1B-201ENST00000243052 KRTAP2-3P0C7H8 128 aa5.57□□□□□ -1.52
PDE1B-201ENST00000243052 KRTAP2-4Q9BYR9 128 aa5.57□□□□□ -1.52
PDE1B-201ENST00000243052 KRTAP2-1Q9BYU5 128 aa5.57□□□□□ -1.52
PDE1B-201ENST00000243052 KRTAP19-7Q3SYF9 63 aa5.45□□□□□ -1.54
PDE1B-201ENST00000243052 KRTAP12-4P60329 112 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms