RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 LUZP6Q538Z0 58 aa7.36□□□□□ -1.23
PCDHB3-201ENST00000231130 MYCBP2O75592 4640 aa7.35□□□□□ -1.23
PCDHB3-201ENST00000231130 DYNC1H1Q14204 4646 aaKnown RBP7.34□□□□□ -1.23
PCDHB3-201ENST00000231130 RPS29P62273 56 aaKnown RBP7.31□□□□□ -1.24
PCDHB3-201ENST00000231130 S4R3F8 94 aa7.29□□□□□ -1.24
PCDHB3-201ENST00000231130 SACSQ9NZJ4 4579 aa7.29□□□□□ -1.24
PCDHB3-201ENST00000231130 KRTAP10-6P60371 365 aaPredicted RBP7.26□□□□□ -1.25
PCDHB3-201ENST00000231130 LRP1Q07954 4544 aaKnown RBP7.24□□□□□ -1.25
PCDHB3-201ENST00000231130 KRTAP12-2P59991 146 aa7.22□□□□□ -1.25
PCDHB3-201ENST00000231130 KRTAP10-8P60410 259 aa7.22□□□□□ -1.25
PCDHB3-201ENST00000231130 KRTAP3-3Q9BYR6 98 aa7.21□□□□□ -1.25
PCDHB3-201ENST00000231130 HSPG2P98160 4391 aa7.17□□□□□ -1.26
PCDHB3-201ENST00000231130 KRTAP3-2Q9BYR7 98 aa7.16□□□□□ -1.26
PCDHB3-201ENST00000231130 APOBP04114 4563 aaKnown RBP7.13□□□□□ -1.27
PCDHB3-201ENST00000231130 KRTAP10-4P60372 401 aaPredicted RBP7.11□□□□□ -1.27
PCDHB3-201ENST00000231130 PKHD1L1Q86WI1 4243 aa7.06□□□□□ -1.28
PCDHB3-201ENST00000231130 KRTAP12-1P59990 96 aa7.06□□□□□ -1.28
PCDHB3-201ENST00000231130 XP32Q5T750 250 aa7.05□□□□□ -1.28
PCDHB3-201ENST00000231130 FAT3Q8TDW7 4589 aa7.04□□□□□ -1.28
PCDHB3-201ENST00000231130 PLAC4Q8WY50 150 aa7.04□□□□□ -1.28
PCDHB3-201ENST00000231130 LPAP08519 4548 aa7□□□□□ -1.29
PCDHB3-201ENST00000231130 A0A1B0GVY2 172 aa6.99□□□□□ -1.29
PCDHB3-201ENST00000231130 Q5VSD8 79 aa6.95□□□□□ -1.3
PCDHB3-201ENST00000231130 KMT2CQ8NEZ4 4911 aaKnown RBP6.94□□□□□ -1.3
PCDHB3-201ENST00000231130 LRP2P98164 4655 aa6.92□□□□□ -1.3
PCDHB3-201ENST00000231130 M0QZ58 72 aa6.88□□□□□ -1.31
PCDHB3-201ENST00000231130 TNXBP22105 4242 aa6.87□□□□□ -1.31
PCDHB3-201ENST00000231130 R4GN34 69 aa6.82□□□□□ -1.32
PCDHB3-201ENST00000231130 RYR2Q92736 4967 aa6.78□□□□□ -1.32
PCDHB3-201ENST00000231130 KIAA1109Q2LD37 5005 aa6.77□□□□□ -1.33
PCDHB3-201ENST00000231130 KRTAP17-1Q9BYP8 105 aa6.73□□□□□ -1.33
PCDHB3-201ENST00000231130 RYR1P21817 5038 aa6.72□□□□□ -1.33
PCDHB3-201ENST00000231130 RYR3Q15413 4870 aa6.68□□□□□ -1.34
PCDHB3-201ENST00000231130 LORP23490 312 aaPredicted RBP6.67□□□□□ -1.34
PCDHB3-201ENST00000231130 MT1HL1P0DM35 61 aa6.65□□□□□ -1.35
PCDHB3-201ENST00000231130 CAMK2N1Q7Z7J9 78 aa6.65□□□□□ -1.35
PCDHB3-201ENST00000231130 SEC61BP60468 96 aaKnown RBP6.61□□□□□ -1.35
PCDHB3-201ENST00000231130 ABCA13Q86UQ4 5058 aa6.59□□□□□ -1.35
PCDHB3-201ENST00000231130 PP632Q6XCG6 107 aa6.48□□□□□ -1.37
PCDHB3-201ENST00000231130 MUC2Q02817 5179 aa6.45□□□□□ -1.38
PCDHB3-201ENST00000231130 EPPK1P58107 5090 aaKnown RBP6.41□□□□□ -1.38
PCDHB3-201ENST00000231130 KRTAP4-5Q9BYR2 181 aa6.4□□□□□ -1.38
PCDHB3-201ENST00000231130 KRTAP4-1Q9BYQ7 146 aa6.39□□□□□ -1.39
PCDHB3-201ENST00000231130 KRTAP21-3Q3LHN1 58 aa6.34□□□□□ -1.39
PCDHB3-201ENST00000231130 J3QL48 77 aa6.29□□□□□ -1.4
PCDHB3-201ENST00000231130 MUC17Q685J3 4493 aa6.28□□□□□ -1.4
PCDHB3-201ENST00000231130 TNP1P09430 55 aa6.27□□□□□ -1.4
PCDHB3-201ENST00000231130 PRO2289Q9P1D8 64 aa6.22□□□□□ -1.41
PCDHB3-201ENST00000231130 FAT4Q6V0I7 4981 aa6.11□□□□□ -1.43
PCDHB3-201ENST00000231130 HERC2O95714 4834 aa6.1□□□□□ -1.43
PCDHB3-201ENST00000231130 KRTAP19-2Q3LHN2 52 aa6.06□□□□□ -1.44
PCDHB3-201ENST00000231130 PCLOQ9Y6V0 5065 aa6.06□□□□□ -1.44
PCDHB3-201ENST00000231130 SPRR5A0A1B0GTR4 108 aa6.05□□□□□ -1.44
PCDHB3-201ENST00000231130 M0R2T5 61 aa5.98□□□□□ -1.45
PCDHB3-201ENST00000231130 FLGP20930 4061 aaPredicted RBP5.98□□□□□ -1.45
PCDHB3-201ENST00000231130 INE1O15225 51 aa5.97□□□□□ -1.45
PCDHB3-201ENST00000231130 HERC1Q15751 4861 aa5.92□□□□□ -1.46
PCDHB3-201ENST00000231130 LCE3AQ5TA76 89 aa5.87□□□□□ -1.47
PCDHB3-201ENST00000231130 RNF213Q63HN8 5207 aa5.87□□□□□ -1.47
PCDHB3-201ENST00000231130 KRTAP23-1A1A580 65 aa5.84□□□□□ -1.47
PCDHB3-201ENST00000231130 HMCN2Q8NDA2 5059 aa5.79□□□□□ -1.48
PCDHB3-201ENST00000231130 KRTAP10-10P60014 251 aa5.77□□□□□ -1.49
PCDHB3-201ENST00000231130 BIRC6Q9NR09 4857 aa5.77□□□□□ -1.49
PCDHB3-201ENST00000231130 KRTAP19-1Q8IUB9 90 aa5.76□□□□□ -1.49
PCDHB3-201ENST00000231130 SPRR2GQ9BYE4 73 aa5.7□□□□□ -1.5
PCDHB3-201ENST00000231130 LCE2CQ5TA81 110 aa5.67□□□□□ -1.5
PCDHB3-201ENST00000231130 UBR4Q5T4S7 5183 aa5.63□□□□□ -1.51
PCDHB3-201ENST00000231130 MT1FP04733 61 aa5.61□□□□□ -1.51
PCDHB3-201ENST00000231130 MT2AP02795 61 aa5.56□□□□□ -1.52
PCDHB3-201ENST00000231130 MT1HP80294 61 aa5.56□□□□□ -1.52
PCDHB3-201ENST00000231130 KRTAP12-3P60328 96 aa5.55□□□□□ -1.52
PCDHB3-201ENST00000231130 KRTAP8-1Q8IUC2 63 aa5.52□□□□□ -1.53
PCDHB3-201ENST00000231130 KRTAP10-12P60413 245 aa5.5□□□□□ -1.53
PCDHB3-201ENST00000231130 KRTAP10-5P60370 271 aa5.46□□□□□ -1.54
PCDHB3-201ENST00000231130 KRTAP10-7P60409 375 aaPredicted RBP5.45□□□□□ -1.54
PCDHB3-201ENST00000231130 MT1XP80297 61 aa5.45□□□□□ -1.54
PCDHB3-201ENST00000231130 KMT2DO14686 5537 aa5.44□□□□□ -1.54
PCDHB3-201ENST00000231130 KRTAP9-8Q9BYQ0 159 aa5.44□□□□□ -1.54
PCDHB3-201ENST00000231130 MT1BP07438 61 aa5.41□□□□□ -1.54
PCDHB3-201ENST00000231130 USH2AO75445 5202 aa5.4□□□□□ -1.55
PCDHB3-201ENST00000231130 KRTAP19-8Q3LI54 63 aa5.34□□□□□ -1.55
PCDHB3-201ENST00000231130 KRTAP19-5Q3LI72 72 aa5.25□□□□□ -1.57
PCDHB3-201ENST00000231130 KRTAP4-8A0A0G2JLE6 195 aa5.17□□□□□ -1.58
PCDHB3-201ENST00000231130 KRTAP4-8Q9BYQ9 185 aa5.17□□□□□ -1.58
PCDHB3-201ENST00000231130 LCE3CQ5T5A8 94 aa5.17□□□□□ -1.58
PCDHB3-201ENST00000231130 KRTAP9-3Q9BYQ3 159 aa5.17□□□□□ -1.58
PCDHB3-201ENST00000231130 FSIP2Q5CZC0 6907 aa5.14□□□□□ -1.59
PCDHB3-201ENST00000231130 KRTAP4-7Q9BYR0 210 aa5.12□□□□□ -1.59
PCDHB3-201ENST00000231130 KRTAP9-6A8MVA2 160 aa5.08□□□□□ -1.6
PCDHB3-201ENST00000231130 LCE2BO14633 110 aa5.02□□□□□ -1.61
PCDHB3-201ENST00000231130 KRTAP2-3P0C7H8 128 aa4.87□□□□□ -1.63
PCDHB3-201ENST00000231130 KRTAP2-4Q9BYR9 128 aa4.87□□□□□ -1.63
PCDHB3-201ENST00000231130 KRTAP2-1Q9BYU5 128 aa4.87□□□□□ -1.63
PCDHB3-201ENST00000231130 KRTAP19-7Q3SYF9 63 aa4.84□□□□□ -1.63
PCDHB3-201ENST00000231130 CRCT1Q9UGL9 99 aa4.81□□□□□ -1.64
PCDHB3-201ENST00000231130 DSTQ03001 7570 aaKnown RBP4.8□□□□□ -1.64
PCDHB3-201ENST00000231130 KRTAP12-4P60329 112 aa4.77□□□□□ -1.65
PCDHB3-201ENST00000231130 FCGBPQ9Y6R7 5405 aaPredicted RBP4.75□□□□□ -1.65
PCDHB3-201ENST00000231130 LOC100996750A0A140TA64 210 aa4.74□□□□□ -1.65
PCDHB3-201ENST00000231130 MT1LQ93083 61 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms