RNA–Protein interactions for RNA: ENST00000230461.10

TMEM30A-201, Transcript of transmembrane protein 30A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM30A, Length 4,594 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM30A-201ENST00000230461 DYNC1H1Q14204 4646 aaKnown RBP7.59□□□□□ -1.19
TMEM30A-201ENST00000230461 NDUFAF8A1L188 74 aa7.55□□□□□ -1.2
TMEM30A-201ENST00000230461 DNAH7Q8WXX0 4024 aa7.53□□□□□ -1.2
TMEM30A-201ENST00000230461 C10orf95Q9H7T3 257 aa7.52□□□□□ -1.21
TMEM30A-201ENST00000230461 LRP1BQ9NZR2 4599 aa7.52□□□□□ -1.21
TMEM30A-201ENST00000230461 FAT1Q14517 4588 aa7.51□□□□□ -1.21
TMEM30A-201ENST00000230461 PP632Q6XCG6 107 aa7.51□□□□□ -1.21
TMEM30A-201ENST00000230461 KRTAP10-6P60371 365 aaPredicted RBP7.49□□□□□ -1.21
TMEM30A-201ENST00000230461 DNAH3Q8TD57 4116 aa7.47□□□□□ -1.21
TMEM30A-201ENST00000230461 DNAH2Q9P225 4427 aa7.46□□□□□ -1.22
TMEM30A-201ENST00000230461 KRTAP12-2P59991 146 aa7.45□□□□□ -1.22
TMEM30A-201ENST00000230461 PRO2289Q9P1D8 64 aa7.44□□□□□ -1.22
TMEM30A-201ENST00000230461 FRAS1Q86XX4 4008 aa7.42□□□□□ -1.22
TMEM30A-201ENST00000230461 KRTAP3-3Q9BYR6 98 aa7.42□□□□□ -1.22
TMEM30A-201ENST00000230461 KRTAP12-1P59990 96 aa7.42□□□□□ -1.22
TMEM30A-201ENST00000230461 KRTAP13-4Q3LI77 160 aa7.39□□□□□ -1.23
TMEM30A-201ENST00000230461 KMT2AQ03164 3969 aa7.37□□□□□ -1.23
TMEM30A-201ENST00000230461 RYR1P21817 5038 aa7.37□□□□□ -1.23
TMEM30A-201ENST00000230461 DYNC2H1Q8NCM8 4307 aaKnown RBP7.36□□□□□ -1.23
TMEM30A-201ENST00000230461 KIAA1109Q2LD37 5005 aa7.33□□□□□ -1.24
TMEM30A-201ENST00000230461 KRTAP3-2Q9BYR7 98 aa7.32□□□□□ -1.24
TMEM30A-201ENST00000230461 DNAH8Q96JB1 4490 aa7.32□□□□□ -1.24
TMEM30A-201ENST00000230461 FAT2Q9NYQ8 4349 aa7.3□□□□□ -1.24
TMEM30A-201ENST00000230461 SACSQ9NZJ4 4579 aa7.23□□□□□ -1.25
TMEM30A-201ENST00000230461 RYR3Q15413 4870 aa7.22□□□□□ -1.25
TMEM30A-201ENST00000230461 HECTD4Q9Y4D8 3996 aa7.21□□□□□ -1.26
TMEM30A-201ENST00000230461 DNAH6Q9C0G6 4158 aa7.17□□□□□ -1.26
TMEM30A-201ENST00000230461 KRTAP17-1Q9BYP8 105 aa7.13□□□□□ -1.27
TMEM30A-201ENST00000230461 RYR2Q92736 4967 aa7.12□□□□□ -1.27
TMEM30A-201ENST00000230461 KRTAP4-1Q9BYQ7 146 aa7.11□□□□□ -1.27
TMEM30A-201ENST00000230461 VPS13BQ7Z7G8 4022 aa7.1□□□□□ -1.27
TMEM30A-201ENST00000230461 APOBP04114 4563 aaKnown RBP7.09□□□□□ -1.27
TMEM30A-201ENST00000230461 HYDINQ4G0P3 5121 aa7□□□□□ -1.29
TMEM30A-201ENST00000230461 MYCBP2O75592 4640 aa6.99□□□□□ -1.29
TMEM30A-201ENST00000230461 LRP1Q07954 4544 aaKnown RBP6.97□□□□□ -1.29
TMEM30A-201ENST00000230461 LORP23490 312 aaPredicted RBP6.97□□□□□ -1.29
TMEM30A-201ENST00000230461 HERC2O95714 4834 aa6.89□□□□□ -1.31
TMEM30A-201ENST00000230461 MT1HP80294 61 aa6.84□□□□□ -1.32
TMEM30A-201ENST00000230461 BIRC6Q9NR09 4857 aa6.83□□□□□ -1.32
TMEM30A-201ENST00000230461 KMT2CQ8NEZ4 4911 aaKnown RBP6.83□□□□□ -1.32
TMEM30A-201ENST00000230461 PKHD1P08F94 4074 aa6.82□□□□□ -1.32
TMEM30A-201ENST00000230461 FAT3Q8TDW7 4589 aa6.81□□□□□ -1.32
TMEM30A-201ENST00000230461 HSPG2P98160 4391 aa6.75□□□□□ -1.33
TMEM30A-201ENST00000230461 KRTAP10-12P60413 245 aa6.73□□□□□ -1.33
TMEM30A-201ENST00000230461 PKD1P98161 4303 aa6.73□□□□□ -1.33
TMEM30A-201ENST00000230461 MT2AP02795 61 aa6.71□□□□□ -1.34
TMEM30A-201ENST00000230461 KRTAP15-1Q3LI76 137 aa6.67□□□□□ -1.34
TMEM30A-201ENST00000230461 LRP2P98164 4655 aa6.63□□□□□ -1.35
TMEM30A-201ENST00000230461 SPRR2GQ9BYE4 73 aa6.61□□□□□ -1.35
TMEM30A-201ENST00000230461 MT1FP04733 61 aa6.6□□□□□ -1.35
TMEM30A-201ENST00000230461 KRTAP23-1A1A580 65 aa6.57□□□□□ -1.36
TMEM30A-201ENST00000230461 KRTAP12-3P60328 96 aa6.52□□□□□ -1.37
TMEM30A-201ENST00000230461 LCE3AQ5TA76 89 aa6.52□□□□□ -1.37
TMEM30A-201ENST00000230461 EPPK1P58107 5090 aaKnown RBP6.51□□□□□ -1.37
TMEM30A-201ENST00000230461 HERC1Q15751 4861 aa6.47□□□□□ -1.37
TMEM30A-201ENST00000230461 PCLOQ9Y6V0 5065 aa6.43□□□□□ -1.38
TMEM30A-201ENST00000230461 ABCA13Q86UQ4 5058 aa6.41□□□□□ -1.38
TMEM30A-201ENST00000230461 LCE2CQ5TA81 110 aa6.37□□□□□ -1.39
TMEM30A-201ENST00000230461 KRTAP19-1Q8IUB9 90 aa6.35□□□□□ -1.39
TMEM30A-201ENST00000230461 PKHD1L1Q86WI1 4243 aa6.34□□□□□ -1.39
TMEM30A-201ENST00000230461 LPAP08519 4548 aa6.3□□□□□ -1.4
TMEM30A-201ENST00000230461 KRTAP8-1Q8IUC2 63 aa6.29□□□□□ -1.4
TMEM30A-201ENST00000230461 TNXBP22105 4242 aa6.29□□□□□ -1.4
TMEM30A-201ENST00000230461 KRTAP19-8Q3LI54 63 aa6.28□□□□□ -1.4
TMEM30A-201ENST00000230461 KRTAP9-8Q9BYQ0 159 aa6.27□□□□□ -1.41
TMEM30A-201ENST00000230461 KRTAP19-2Q3LHN2 52 aa6.23□□□□□ -1.41
TMEM30A-201ENST00000230461 CRCT1Q9UGL9 99 aa6.16□□□□□ -1.42
TMEM30A-201ENST00000230461 MT1BP07438 61 aa6.11□□□□□ -1.43
TMEM30A-201ENST00000230461 KRTAP9-3Q9BYQ3 159 aa6.09□□□□□ -1.43
TMEM30A-201ENST00000230461 MUC17Q685J3 4493 aa6.06□□□□□ -1.44
TMEM30A-201ENST00000230461 MT1XP80297 61 aa6.04□□□□□ -1.44
TMEM30A-201ENST00000230461 KRTAP10-5P60370 271 aa6.01□□□□□ -1.45
TMEM30A-201ENST00000230461 KRTAP19-5Q3LI72 72 aa6.01□□□□□ -1.45
TMEM30A-201ENST00000230461 KRTAP10-7P60409 375 aaPredicted RBP6□□□□□ -1.45
TMEM30A-201ENST00000230461 FLGP20930 4061 aaPredicted RBP5.97□□□□□ -1.45
TMEM30A-201ENST00000230461 RNF213Q63HN8 5207 aa5.95□□□□□ -1.46
TMEM30A-201ENST00000230461 SPRR2FQ96RM1 72 aa5.93□□□□□ -1.46
TMEM30A-201ENST00000230461 FAT4Q6V0I7 4981 aa5.91□□□□□ -1.46
TMEM30A-201ENST00000230461 HMCN2Q8NDA2 5059 aa5.9□□□□□ -1.47
TMEM30A-201ENST00000230461 MUC2Q02817 5179 aa5.88□□□□□ -1.47
TMEM30A-201ENST00000230461 UBR4Q5T4S7 5183 aa5.87□□□□□ -1.47
TMEM30A-201ENST00000230461 LCE2BO14633 110 aa5.86□□□□□ -1.47
TMEM30A-201ENST00000230461 INE1O15225 51 aa5.81□□□□□ -1.48
TMEM30A-201ENST00000230461 LCE3CQ5T5A8 94 aa5.8□□□□□ -1.48
TMEM30A-201ENST00000230461 KRTAP19-4Q3LI73 84 aa5.79□□□□□ -1.48
TMEM30A-201ENST00000230461 LCE2AQ5TA79 106 aaPredicted RBP5.77□□□□□ -1.49
TMEM30A-201ENST00000230461 KRTAP4-8A0A0G2JLE6 195 aa5.74□□□□□ -1.49
TMEM30A-201ENST00000230461 KRTAP4-8Q9BYQ9 185 aa5.74□□□□□ -1.49
TMEM30A-201ENST00000230461 FSIP2Q5CZC0 6907 aa5.59□□□□□ -1.51
TMEM30A-201ENST00000230461 KRTAP19-6Q3LI70 58 aa5.54□□□□□ -1.52
TMEM30A-201ENST00000230461 SPRR2EP22531 72 aa5.54□□□□□ -1.52
TMEM30A-201ENST00000230461 SPRR2BP35325 72 aa5.54□□□□□ -1.52
TMEM30A-201ENST00000230461 SPRR2AP35326 72 aa5.54□□□□□ -1.52
TMEM30A-201ENST00000230461 MT1GP13640 62 aa5.5□□□□□ -1.53
TMEM30A-201ENST00000230461 KRTAP9-2Q9BYQ4 174 aa5.46□□□□□ -1.54
TMEM30A-201ENST00000230461 LCE2DQ5TA82 110 aaPredicted RBP5.45□□□□□ -1.54
TMEM30A-201ENST00000230461 SPRR5A0A1B0GTR4 108 aa5.43□□□□□ -1.54
TMEM30A-201ENST00000230461 MT1EP04732 61 aa5.4□□□□□ -1.55
TMEM30A-201ENST00000230461 KRTAP19-3Q7Z4W3 81 aa5.37□□□□□ -1.55
TMEM30A-201ENST00000230461 MT1LQ93083 61 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms