RNA–Protein interactions for RNA: ENST00000219689.11

USP31-201, Transcript of ubiquitin specific peptidase 31, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP31, Length 10,699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP31-201ENST00000219689 ANK2Q01484 3957 aa4.96□□□□□ -1.62
USP31-201ENST00000219689 KRTAP10-12P60413 245 aa4.96□□□□□ -1.62
USP31-201ENST00000219689 KRTAP21-3Q3LHN1 58 aa4.9□□□□□ -1.63
USP31-201ENST00000219689 CRCT1Q9UGL9 99 aa4.9□□□□□ -1.63
USP31-201ENST00000219689 KMT2AQ03164 3969 aa4.9□□□□□ -1.63
USP31-201ENST00000219689 DNAH6Q9C0G6 4158 aa4.87□□□□□ -1.63
USP31-201ENST00000219689 ANK3Q12955 4377 aaKnown RBP4.84□□□□□ -1.63
USP31-201ENST00000219689 KRTAP12-3P60328 96 aa4.83□□□□□ -1.64
USP31-201ENST00000219689 LCE3AQ5TA76 89 aa4.81□□□□□ -1.64
USP31-201ENST00000219689 VPS13BQ7Z7G8 4022 aa4.79□□□□□ -1.64
USP31-201ENST00000219689 HUWE1Q7Z6Z7 4374 aaKnown RBP4.76□□□□□ -1.65
USP31-201ENST00000219689 KRTAP10-5P60370 271 aa4.7□□□□□ -1.66
USP31-201ENST00000219689 LORP23490 312 aaPredicted RBP4.63□□□□□ -1.67
USP31-201ENST00000219689 DNAH1Q9P2D7 4330 aa4.61□□□□□ -1.67
USP31-201ENST00000219689 DNAH10Q8IVF4 4471 aa4.59□□□□□ -1.67
USP31-201ENST00000219689 PRKDCP78527 4128 aaKnown RBP4.58□□□□□ -1.68
USP31-201ENST00000219689 FLGP20930 4061 aaPredicted RBP4.57□□□□□ -1.68
USP31-201ENST00000219689 VPS13DQ5THJ4 4388 aa4.5□□□□□ -1.69
USP31-201ENST00000219689 DNAH8Q96JB1 4490 aa4.49□□□□□ -1.69
USP31-201ENST00000219689 DNAH17Q9UFH2 4485 aa4.43□□□□□ -1.7
USP31-201ENST00000219689 MT1HL1P0DM35 61 aa4.39□□□□□ -1.71
USP31-201ENST00000219689 DNAH11Q96DT5 4516 aa4.39□□□□□ -1.71
USP31-201ENST00000219689 DYNC2H1Q8NCM8 4307 aaKnown RBP4.35□□□□□ -1.71
USP31-201ENST00000219689 KRTAP8-1Q8IUC2 63 aa4.32□□□□□ -1.72
USP31-201ENST00000219689 KRTAP10-4P60372 401 aaPredicted RBP4.27□□□□□ -1.73
USP31-201ENST00000219689 LCE3CQ5T5A8 94 aa4.25□□□□□ -1.73
USP31-201ENST00000219689 FAT2Q9NYQ8 4349 aa4.23□□□□□ -1.73
USP31-201ENST00000219689 DNAH9Q9NYC9 4486 aa4.22□□□□□ -1.73
USP31-201ENST00000219689 KRTAP19-5Q3LI72 72 aa4.21□□□□□ -1.74
USP31-201ENST00000219689 PKHD1L1Q86WI1 4243 aa4.19□□□□□ -1.74
USP31-201ENST00000219689 KRTAP4-5Q9BYR2 181 aa4.13□□□□□ -1.75
USP31-201ENST00000219689 PKHD1P08F94 4074 aa4.11□□□□□ -1.75
USP31-201ENST00000219689 KRTAP12-4P60329 112 aa4.08□□□□□ -1.76
USP31-201ENST00000219689 KRTAP10-7P60409 375 aaPredicted RBP4.07□□□□□ -1.76
USP31-201ENST00000219689 SPRR2GQ9BYE4 73 aa4.07□□□□□ -1.76
USP31-201ENST00000219689 KRTAP4-1Q9BYQ7 146 aa4.06□□□□□ -1.76
USP31-201ENST00000219689 LCE3BQ5TA77 95 aa4.03□□□□□ -1.76
USP31-201ENST00000219689 SPRR5A0A1B0GTR4 108 aa4.01□□□□□ -1.77
USP31-201ENST00000219689 PKD1P98161 4303 aa4.01□□□□□ -1.77
USP31-201ENST00000219689 STARD9Q9P2P6 4700 aa4□□□□□ -1.77
USP31-201ENST00000219689 PLECQ15149 4684 aaKnown RBP3.97□□□□□ -1.77
USP31-201ENST00000219689 KRTAP19-4Q3LI73 84 aa3.96□□□□□ -1.78
USP31-201ENST00000219689 SPRR2FQ96RM1 72 aa3.95□□□□□ -1.78
USP31-201ENST00000219689 DNAH5Q8TE73 4624 aa3.95□□□□□ -1.78
USP31-201ENST00000219689 MT3P25713 68 aa3.89□□□□□ -1.79
USP31-201ENST00000219689 MT1HP80294 61 aa3.89□□□□□ -1.79
USP31-201ENST00000219689 MT2AP02795 61 aa3.88□□□□□ -1.79
USP31-201ENST00000219689 APOBP04114 4563 aaKnown RBP3.88□□□□□ -1.79
USP31-201ENST00000219689 TNXBP22105 4242 aa3.86□□□□□ -1.79
USP31-201ENST00000219689 MT1FP04733 61 aa3.86□□□□□ -1.79
USP31-201ENST00000219689 HSPG2P98160 4391 aa3.85□□□□□ -1.79
USP31-201ENST00000219689 MT1GP13640 62 aa3.81□□□□□ -1.8
USP31-201ENST00000219689 FAT1Q14517 4588 aa3.78□□□□□ -1.8
USP31-201ENST00000219689 LCE3DQ9BYE3 92 aa3.74□□□□□ -1.81
USP31-201ENST00000219689 MT1XP80297 61 aa3.74□□□□□ -1.81
USP31-201ENST00000219689 SACSQ9NZJ4 4579 aa3.71□□□□□ -1.82
USP31-201ENST00000219689 PRM1P04553 51 aa3.71□□□□□ -1.82
USP31-201ENST00000219689 LRP1BQ9NZR2 4599 aa3.71□□□□□ -1.82
USP31-201ENST00000219689 LCE3EQ5T5B0 92 aa3.67□□□□□ -1.82
USP31-201ENST00000219689 KRTAP19-1Q8IUB9 90 aa3.67□□□□□ -1.82
USP31-201ENST00000219689 DYNC1H1Q14204 4646 aaKnown RBP3.66□□□□□ -1.82
USP31-201ENST00000219689 LRP1Q07954 4544 aaKnown RBP3.65□□□□□ -1.83
USP31-201ENST00000219689 KRTAP19-8Q3LI54 63 aa3.59□□□□□ -1.83
USP31-201ENST00000219689 MYCBP2O75592 4640 aa3.57□□□□□ -1.84
USP31-201ENST00000219689 SPRR2EP22531 72 aa3.57□□□□□ -1.84
USP31-201ENST00000219689 SPRR2BP35325 72 aa3.57□□□□□ -1.84
USP31-201ENST00000219689 SPRR2AP35326 72 aa3.57□□□□□ -1.84
USP31-201ENST00000219689 KRTAP4-8A0A0G2JLE6 195 aa3.56□□□□□ -1.84
USP31-201ENST00000219689 KRTAP4-8Q9BYQ9 185 aa3.56□□□□□ -1.84
USP31-201ENST00000219689 KRTAP4-7Q9BYR0 210 aa3.56□□□□□ -1.84
USP31-201ENST00000219689 LCE2BO14633 110 aa3.51□□□□□ -1.85
USP31-201ENST00000219689 MT1BP07438 61 aa3.48□□□□□ -1.85
USP31-201ENST00000219689 FAT3Q8TDW7 4589 aa3.48□□□□□ -1.85
USP31-201ENST00000219689 SPRR2DP22532 72 aa3.46□□□□□ -1.85
USP31-201ENST00000219689 LPAP08519 4548 aa3.46□□□□□ -1.85
USP31-201ENST00000219689 LOC100996750A0A140TA64 210 aa3.45□□□□□ -1.86
USP31-201ENST00000219689 RYR1P21817 5038 aa3.42□□□□□ -1.86
USP31-201ENST00000219689 MT1LQ93083 61 aa3.41□□□□□ -1.86
USP31-201ENST00000219689 MUC17Q685J3 4493 aa3.38□□□□□ -1.87
USP31-201ENST00000219689 KRTAP9-8Q9BYQ0 159 aa3.36□□□□□ -1.87
USP31-201ENST00000219689 KRTAP4-9Q9BYQ8 210 aa3.34□□□□□ -1.87
USP31-201ENST00000219689 KRTAP19-3Q7Z4W3 81 aa3.34□□□□□ -1.88
USP31-201ENST00000219689 MT1EP04732 61 aa3.31□□□□□ -1.88
USP31-201ENST00000219689 KRTAP2-3P0C7H8 128 aa3.3□□□□□ -1.88
USP31-201ENST00000219689 KRTAP2-4Q9BYR9 128 aa3.3□□□□□ -1.88
USP31-201ENST00000219689 KRTAP2-1Q9BYU5 128 aa3.3□□□□□ -1.88
USP31-201ENST00000219689 KRTAP4-3Q9BYR4 195 aa3.29□□□□□ -1.88
USP31-201ENST00000219689 KRTAP9-3Q9BYQ3 159 aa3.27□□□□□ -1.89
USP31-201ENST00000219689 KRTAP17-1Q9BYP8 105 aa3.26□□□□□ -1.89
USP31-201ENST00000219689 LCE2CQ5TA81 110 aa3.25□□□□□ -1.89
USP31-201ENST00000219689 LRP2P98164 4655 aa3.23□□□□□ -1.89
USP31-201ENST00000219689 LCE1DQ5T752 114 aa3.22□□□□□ -1.89
USP31-201ENST00000219689 MT1MQ8N339 61 aa3.21□□□□□ -1.9
USP31-201ENST00000219689 LCE1BQ5T7P3 118 aa3.2□□□□□ -1.9
USP31-201ENST00000219689 KRTAP6-2Q3LI66 62 aa3.17□□□□□ -1.9
USP31-201ENST00000219689 MT4P47944 62 aa3.17□□□□□ -1.9
USP31-201ENST00000219689 LCE2DQ5TA82 110 aaPredicted RBP3.15□□□□□ -1.91
USP31-201ENST00000219689 KRTAP9-7A8MTY7 169 aa3.13□□□□□ -1.91
USP31-201ENST00000219689 PCLOQ9Y6V0 5065 aa3.11□□□□□ -1.91
USP31-201ENST00000219689 KRTAP9-2Q9BYQ4 174 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms