RNA–Protein interactions for RNA: ENST00000218364.4

HTATSF1-201, Transcript of HIV-1 Tat specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTATSF1, Length 2,775 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-201ENST00000218364 FLG2Q5D862 2391 aaPredicted RBP11.46□□□□□ -0.57
HTATSF1-201ENST00000218364 KRTAP3-3Q9BYR6 98 aa11.43□□□□□ -0.58
HTATSF1-201ENST00000218364 FAT3Q8TDW7 4589 aa11.42□□□□□ -0.58
HTATSF1-201ENST00000218364 KRTAP10-6P60371 365 aaPredicted RBP11.4□□□□□ -0.58
HTATSF1-201ENST00000218364 Q5VSD8 79 aa11.4□□□□□ -0.58
HTATSF1-201ENST00000218364 KRTAP10-8P60410 259 aa11.38□□□□□ -0.59
HTATSF1-201ENST00000218364 RPL37P61927 97 aaKnown RBP11.38□□□□□ -0.59
HTATSF1-201ENST00000218364 KRTAP17-1Q9BYP8 105 aa11.33□□□□□ -0.59
HTATSF1-201ENST00000218364 KRTAP3-2Q9BYR7 98 aa11.31□□□□□ -0.6
HTATSF1-201ENST00000218364 BIRC6Q9NR09 4857 aa11.29□□□□□ -0.6
HTATSF1-201ENST00000218364 TNXBP22105 4242 aa11.28□□□□□ -0.6
HTATSF1-201ENST00000218364 KRTAP13-4Q3LI77 160 aa11.28□□□□□ -0.6
HTATSF1-201ENST00000218364 ROMO1P60602 79 aa11.27□□□□□ -0.61
HTATSF1-201ENST00000218364 XP32Q5T750 250 aa11.27□□□□□ -0.61
HTATSF1-201ENST00000218364 S4R3F8 94 aa11.25□□□□□ -0.61
HTATSF1-201ENST00000218364 LRP1Q07954 4544 aaKnown RBP11.22□□□□□ -0.61
HTATSF1-201ENST00000218364 CRIPTQ9P021 101 aa11.21□□□□□ -0.62
HTATSF1-201ENST00000218364 A0A0D9SG42 100 aa11.14□□□□□ -0.63
HTATSF1-201ENST00000218364 KRTAP4-5Q9BYR2 181 aa11.12□□□□□ -0.63
HTATSF1-201ENST00000218364 HERC2O95714 4834 aa11.1□□□□□ -0.63
HTATSF1-201ENST00000218364 P0C880 135 aa11.1□□□□□ -0.63
HTATSF1-201ENST00000218364 DMBT1Q9UGM3 2413 aaPredicted RBP11.08□□□□□ -0.64
HTATSF1-201ENST00000218364 MYCBP2O75592 4640 aa11.05□□□□□ -0.64
HTATSF1-201ENST00000218364 H3BS24 57 aa11.01□□□□□ -0.65
HTATSF1-201ENST00000218364 ABCA13Q86UQ4 5058 aa10.99□□□□□ -0.65
HTATSF1-201ENST00000218364 TPRXLQ17RH7 258 aa10.99□□□□□ -0.65
HTATSF1-201ENST00000218364 MT1HL1P0DM35 61 aa10.94□□□□□ -0.66
HTATSF1-201ENST00000218364 KRTAP12-2P59991 146 aa10.93□□□□□ -0.66
HTATSF1-201ENST00000218364 KRTAP12-1P59990 96 aa10.87□□□□□ -0.67
HTATSF1-201ENST00000218364 C10orf95Q9H7T3 257 aa10.82□□□□□ -0.68
HTATSF1-201ENST00000218364 M0QZ58 72 aa10.8□□□□□ -0.68
HTATSF1-201ENST00000218364 SPINT4Q6UDR6 99 aa10.77□□□□□ -0.69
HTATSF1-201ENST00000218364 J3QL48 77 aa10.75□□□□□ -0.69
HTATSF1-201ENST00000218364 PCLOQ9Y6V0 5065 aa10.72□□□□□ -0.69
HTATSF1-201ENST00000218364 LPAP08519 4548 aa10.71□□□□□ -0.7
HTATSF1-201ENST00000218364 LRP2P98164 4655 aa10.62□□□□□ -0.71
HTATSF1-201ENST00000218364 KRTAP15-1Q3LI76 137 aa10.58□□□□□ -0.72
HTATSF1-201ENST00000218364 HERC1Q15751 4861 aa10.44□□□□□ -0.74
HTATSF1-201ENST00000218364 R4GN34 69 aa10.43□□□□□ -0.74
HTATSF1-201ENST00000218364 SEC61BP60468 96 aaKnown RBP10.35□□□□□ -0.75
HTATSF1-201ENST00000218364 NDUFAF8A1L188 74 aa10.3□□□□□ -0.76
HTATSF1-201ENST00000218364 LORP23490 312 aaPredicted RBP10.28□□□□□ -0.76
HTATSF1-201ENST00000218364 MUC17Q685J3 4493 aa10.27□□□□□ -0.76
HTATSF1-201ENST00000218364 HMCN2Q8NDA2 5059 aa10.24□□□□□ -0.77
HTATSF1-201ENST00000218364 KRTAP4-1Q9BYQ7 146 aa10.22□□□□□ -0.77
HTATSF1-201ENST00000218364 KRTAP19-2Q3LHN2 52 aa10.14□□□□□ -0.79
HTATSF1-201ENST00000218364 PLAC4Q8WY50 150 aa10.01□□□□□ -0.81
HTATSF1-201ENST00000218364 PP632Q6XCG6 107 aa9.95□□□□□ -0.82
HTATSF1-201ENST00000218364 CAMK2N1Q7Z7J9 78 aa9.91□□□□□ -0.82
HTATSF1-201ENST00000218364 UBR4Q5T4S7 5183 aa9.82□□□□□ -0.84
HTATSF1-201ENST00000218364 MUC2Q02817 5179 aa9.78□□□□□ -0.84
HTATSF1-201ENST00000218364 RNF213Q63HN8 5207 aa9.69□□□□□ -0.86
HTATSF1-201ENST00000218364 FLGP20930 4061 aaPredicted RBP9.68□□□□□ -0.86
HTATSF1-201ENST00000218364 KRTAP23-1A1A580 65 aa9.63□□□□□ -0.87
HTATSF1-201ENST00000218364 TNP1P09430 55 aa9.61□□□□□ -0.87
HTATSF1-201ENST00000218364 LUZP6Q538Z0 58 aa9.56□□□□□ -0.88
HTATSF1-201ENST00000218364 LCE2CQ5TA81 110 aa9.41□□□□□ -0.9
HTATSF1-201ENST00000218364 SPRR2GQ9BYE4 73 aa9.41□□□□□ -0.9
HTATSF1-201ENST00000218364 FAT4Q6V0I7 4981 aa9.39□□□□□ -0.91
HTATSF1-201ENST00000218364 SPRR5A0A1B0GTR4 108 aa9.38□□□□□ -0.91
HTATSF1-201ENST00000218364 KRTAP19-1Q8IUB9 90 aa9.32□□□□□ -0.92
HTATSF1-201ENST00000218364 A0A0A0MQY5 61 aa9.2□□□□□ -0.94
HTATSF1-201ENST00000218364 MT1HP80294 61 aa9.19□□□□□ -0.94
HTATSF1-201ENST00000218364 M0R2T5 61 aa9.15□□□□□ -0.94
HTATSF1-201ENST00000218364 LCE3AQ5TA76 89 aa9.07□□□□□ -0.96
HTATSF1-201ENST00000218364 MT2AP02795 61 aa9.04□□□□□ -0.96
HTATSF1-201ENST00000218364 MT1FP04733 61 aa9.04□□□□□ -0.96
HTATSF1-201ENST00000218364 KRTAP10-10P60014 251 aa8.99□□□□□ -0.97
HTATSF1-201ENST00000218364 KRTAP19-8Q3LI54 63 aa8.96□□□□□ -0.97
HTATSF1-201ENST00000218364 KRTAP9-8Q9BYQ0 159 aa8.96□□□□□ -0.97
HTATSF1-201ENST00000218364 LCE2AQ5TA79 106 aaPredicted RBP8.95□□□□□ -0.98
HTATSF1-201ENST00000218364 KRTAP8-1Q8IUC2 63 aa8.91□□□□□ -0.98
HTATSF1-201ENST00000218364 MT1BP07438 61 aa8.81□□□□□ -1
HTATSF1-201ENST00000218364 KRTAP10-5P60370 271 aa8.81□□□□□ -1
HTATSF1-201ENST00000218364 MT1XP80297 61 aa8.78□□□□□ -1
HTATSF1-201ENST00000218364 KRTAP10-12P60413 245 aa8.65□□□□□ -1.02
HTATSF1-201ENST00000218364 KRTAP12-3P60328 96 aa8.64□□□□□ -1.03
HTATSF1-201ENST00000218364 KRTAP9-3Q9BYQ3 159 aa8.58□□□□□ -1.04
HTATSF1-201ENST00000218364 KRTAP10-7P60409 375 aaPredicted RBP8.53□□□□□ -1.04
HTATSF1-201ENST00000218364 PRO2289Q9P1D8 64 aa8.41□□□□□ -1.06
HTATSF1-201ENST00000218364 INE1O15225 51 aa8.38□□□□□ -1.07
HTATSF1-201ENST00000218364 LCE2BO14633 110 aa8.32□□□□□ -1.08
HTATSF1-201ENST00000218364 KRTAP19-5Q3LI72 72 aa8.21□□□□□ -1.1
HTATSF1-201ENST00000218364 USH2AO75445 5202 aa8.2□□□□□ -1.1
HTATSF1-201ENST00000218364 LCE2DQ5TA82 110 aaPredicted RBP8.19□□□□□ -1.1
HTATSF1-201ENST00000218364 LCE3CQ5T5A8 94 aa8.16□□□□□ -1.1
HTATSF1-201ENST00000218364 FSIP2Q5CZC0 6907 aa8.06□□□□□ -1.12
HTATSF1-201ENST00000218364 KRTAP9-2Q9BYQ4 174 aa8.02□□□□□ -1.13
HTATSF1-201ENST00000218364 SSPOA2VEC9 5147 aa7.98□□□□□ -1.13
HTATSF1-201ENST00000218364 KRTAP4-8A0A0G2JLE6 195 aa7.93□□□□□ -1.14
HTATSF1-201ENST00000218364 KRTAP4-8Q9BYQ9 185 aa7.93□□□□□ -1.14
HTATSF1-201ENST00000218364 KRTAP9-6A8MVA2 160 aa7.88□□□□□ -1.15
HTATSF1-201ENST00000218364 KRTAP19-7Q3SYF9 63 aa7.83□□□□□ -1.16
HTATSF1-201ENST00000218364 KRTAP19-6Q3LI70 58 aa7.82□□□□□ -1.16
HTATSF1-201ENST00000218364 KMT2DO14686 5537 aa7.79□□□□□ -1.16
HTATSF1-201ENST00000218364 KRTAP19-4Q3LI73 84 aa7.77□□□□□ -1.17
HTATSF1-201ENST00000218364 KRTAP2-3P0C7H8 128 aa7.72□□□□□ -1.17
HTATSF1-201ENST00000218364 KRTAP2-4Q9BYR9 128 aa7.72□□□□□ -1.17
HTATSF1-201ENST00000218364 KRTAP2-1Q9BYU5 128 aa7.72□□□□□ -1.17
HTATSF1-201ENST00000218364 CRCT1Q9UGL9 99 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms