RNA–Protein interactions for RNA: ENST00000217109.8

CSTF1-201, Transcript of cleavage stimulation factor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-201ENST00000217109 P0C880 135 aa4.99□□□□□ -1.61
CSTF1-201ENST00000217109 DYNC1H1Q14204 4646 aaKnown RBP4.95□□□□□ -1.62
CSTF1-201ENST00000217109 CAMK2N1Q7Z7J9 78 aa4.94□□□□□ -1.62
CSTF1-201ENST00000217109 HYDINQ4G0P3 5121 aa4.93□□□□□ -1.62
CSTF1-201ENST00000217109 C10orf95Q9H7T3 257 aa4.92□□□□□ -1.62
CSTF1-201ENST00000217109 ALMS1Q8TCU4 4167 aa4.89□□□□□ -1.63
CSTF1-201ENST00000217109 PKHD1P08F94 4074 aa4.89□□□□□ -1.63
CSTF1-201ENST00000217109 TPRXLQ17RH7 258 aa4.89□□□□□ -1.63
CSTF1-201ENST00000217109 MYCBP2O75592 4640 aa4.88□□□□□ -1.63
CSTF1-201ENST00000217109 KRTAP13-4Q3LI77 160 aa4.86□□□□□ -1.63
CSTF1-201ENST00000217109 KRTAP10-6P60371 365 aaPredicted RBP4.86□□□□□ -1.63
CSTF1-201ENST00000217109 M0R2T5 61 aa4.83□□□□□ -1.64
CSTF1-201ENST00000217109 MT1HL1P0DM35 61 aa4.83□□□□□ -1.64
CSTF1-201ENST00000217109 KRTAP3-3Q9BYR6 98 aa4.83□□□□□ -1.64
CSTF1-201ENST00000217109 LRP1Q07954 4544 aaKnown RBP4.81□□□□□ -1.64
CSTF1-201ENST00000217109 KRTAP12-2P59991 146 aa4.8□□□□□ -1.64
CSTF1-201ENST00000217109 SACSQ9NZJ4 4579 aa4.8□□□□□ -1.64
CSTF1-201ENST00000217109 FAT2Q9NYQ8 4349 aa4.79□□□□□ -1.64
CSTF1-201ENST00000217109 APOBP04114 4563 aaKnown RBP4.78□□□□□ -1.64
CSTF1-201ENST00000217109 KRTAP3-2Q9BYR7 98 aa4.77□□□□□ -1.65
CSTF1-201ENST00000217109 KIAA1109Q2LD37 5005 aa4.76□□□□□ -1.65
CSTF1-201ENST00000217109 KRTAP4-5Q9BYR2 181 aa4.74□□□□□ -1.65
CSTF1-201ENST00000217109 FAT3Q8TDW7 4589 aa4.74□□□□□ -1.65
CSTF1-201ENST00000217109 A0A0A0MQY5 61 aa4.74□□□□□ -1.65
CSTF1-201ENST00000217109 KRTAP12-1P59990 96 aa4.73□□□□□ -1.65
CSTF1-201ENST00000217109 PKD1P98161 4303 aa4.73□□□□□ -1.65
CSTF1-201ENST00000217109 RYR1P21817 5038 aa4.71□□□□□ -1.66
CSTF1-201ENST00000217109 NDUFAF8A1L188 74 aa4.7□□□□□ -1.66
CSTF1-201ENST00000217109 KMT2CQ8NEZ4 4911 aaKnown RBP4.68□□□□□ -1.66
CSTF1-201ENST00000217109 LUZP6Q538Z0 58 aa4.68□□□□□ -1.66
CSTF1-201ENST00000217109 RYR3Q15413 4870 aa4.67□□□□□ -1.66
CSTF1-201ENST00000217109 LCE2DQ5TA82 110 aaPredicted RBP4.67□□□□□ -1.66
CSTF1-201ENST00000217109 KRTAP17-1Q9BYP8 105 aa4.63□□□□□ -1.67
CSTF1-201ENST00000217109 RYR2Q92736 4967 aa4.62□□□□□ -1.67
CSTF1-201ENST00000217109 PLAC4Q8WY50 150 aa4.6□□□□□ -1.67
CSTF1-201ENST00000217109 LRP2P98164 4655 aa4.57□□□□□ -1.68
CSTF1-201ENST00000217109 TNP1P09430 55 aa4.54□□□□□ -1.68
CSTF1-201ENST00000217109 LORP23490 312 aaPredicted RBP4.52□□□□□ -1.69
CSTF1-201ENST00000217109 HSPG2P98160 4391 aa4.52□□□□□ -1.69
CSTF1-201ENST00000217109 KRTAP4-1Q9BYQ7 146 aa4.47□□□□□ -1.69
CSTF1-201ENST00000217109 PP632Q6XCG6 107 aa4.46□□□□□ -1.7
CSTF1-201ENST00000217109 PKHD1L1Q86WI1 4243 aa4.46□□□□□ -1.7
CSTF1-201ENST00000217109 KRTAP10-10P60014 251 aa4.45□□□□□ -1.7
CSTF1-201ENST00000217109 LPAP08519 4548 aa4.43□□□□□ -1.7
CSTF1-201ENST00000217109 TNXBP22105 4242 aa4.39□□□□□ -1.71
CSTF1-201ENST00000217109 KRTAP15-1Q3LI76 137 aa4.37□□□□□ -1.71
CSTF1-201ENST00000217109 HERC2O95714 4834 aa4.36□□□□□ -1.71
CSTF1-201ENST00000217109 EPPK1P58107 5090 aaKnown RBP4.36□□□□□ -1.71
CSTF1-201ENST00000217109 ABCA13Q86UQ4 5058 aa4.28□□□□□ -1.72
CSTF1-201ENST00000217109 MUC2Q02817 5179 aa4.21□□□□□ -1.74
CSTF1-201ENST00000217109 PRO2289Q9P1D8 64 aa4.1□□□□□ -1.75
CSTF1-201ENST00000217109 MT1HP80294 61 aa4.08□□□□□ -1.76
CSTF1-201ENST00000217109 HERC1Q15751 4861 aa4.08□□□□□ -1.76
CSTF1-201ENST00000217109 LCE3AQ5TA76 89 aa4.07□□□□□ -1.76
CSTF1-201ENST00000217109 KRTAP19-2Q3LHN2 52 aa4.06□□□□□ -1.76
CSTF1-201ENST00000217109 BIRC6Q9NR09 4857 aa4.05□□□□□ -1.76
CSTF1-201ENST00000217109 FAT4Q6V0I7 4981 aa4.04□□□□□ -1.76
CSTF1-201ENST00000217109 MT2AP02795 61 aa4.04□□□□□ -1.76
CSTF1-201ENST00000217109 SPRR2GQ9BYE4 73 aa4.03□□□□□ -1.76
CSTF1-201ENST00000217109 MT1FP04733 61 aa4.03□□□□□ -1.76
CSTF1-201ENST00000217109 RNF213Q63HN8 5207 aa4.03□□□□□ -1.76
CSTF1-201ENST00000217109 MUC17Q685J3 4493 aa4.01□□□□□ -1.77
CSTF1-201ENST00000217109 KRTAP10-12P60413 245 aa4□□□□□ -1.77
CSTF1-201ENST00000217109 KRTAP19-1Q8IUB9 90 aa4□□□□□ -1.77
CSTF1-201ENST00000217109 KRTAP23-1A1A580 65 aa3.99□□□□□ -1.77
CSTF1-201ENST00000217109 LCE2CQ5TA81 110 aa3.98□□□□□ -1.77
CSTF1-201ENST00000217109 FLGP20930 4061 aaPredicted RBP3.98□□□□□ -1.77
CSTF1-201ENST00000217109 PCLOQ9Y6V0 5065 aa3.96□□□□□ -1.78
CSTF1-201ENST00000217109 KRTAP12-3P60328 96 aa3.95□□□□□ -1.78
CSTF1-201ENST00000217109 UBR4Q5T4S7 5183 aa3.9□□□□□ -1.78
CSTF1-201ENST00000217109 KRTAP9-8Q9BYQ0 159 aa3.87□□□□□ -1.79
CSTF1-201ENST00000217109 HMCN2Q8NDA2 5059 aa3.86□□□□□ -1.79
CSTF1-201ENST00000217109 KRTAP19-8Q3LI54 63 aa3.8□□□□□ -1.8
CSTF1-201ENST00000217109 MT1BP07438 61 aa3.8□□□□□ -1.8
CSTF1-201ENST00000217109 KRTAP8-1Q8IUC2 63 aa3.79□□□□□ -1.8
CSTF1-201ENST00000217109 MT1XP80297 61 aa3.78□□□□□ -1.8
CSTF1-201ENST00000217109 KRTAP10-7P60409 375 aaPredicted RBP3.78□□□□□ -1.8
CSTF1-201ENST00000217109 KRTAP10-5P60370 271 aa3.78□□□□□ -1.8
CSTF1-201ENST00000217109 KRTAP9-3Q9BYQ3 159 aa3.71□□□□□ -1.82
CSTF1-201ENST00000217109 KRTAP19-5Q3LI72 72 aa3.7□□□□□ -1.82
CSTF1-201ENST00000217109 SPRR5A0A1B0GTR4 108 aa3.69□□□□□ -1.82
CSTF1-201ENST00000217109 FSIP2Q5CZC0 6907 aa3.68□□□□□ -1.82
CSTF1-201ENST00000217109 LCE2BO14633 110 aa3.67□□□□□ -1.82
CSTF1-201ENST00000217109 KRTAP4-8A0A0G2JLE6 195 aa3.63□□□□□ -1.83
CSTF1-201ENST00000217109 KRTAP4-8Q9BYQ9 185 aa3.63□□□□□ -1.83
CSTF1-201ENST00000217109 INE1O15225 51 aa3.62□□□□□ -1.83
CSTF1-201ENST00000217109 CRCT1Q9UGL9 99 aa3.62□□□□□ -1.83
CSTF1-201ENST00000217109 LCE3CQ5T5A8 94 aa3.59□□□□□ -1.83
CSTF1-201ENST00000217109 USH2AO75445 5202 aa3.59□□□□□ -1.84
CSTF1-201ENST00000217109 LCE2AQ5TA79 106 aaPredicted RBP3.54□□□□□ -1.84
CSTF1-201ENST00000217109 KMT2DO14686 5537 aa3.49□□□□□ -1.85
CSTF1-201ENST00000217109 KRTAP4-7Q9BYR0 210 aa3.47□□□□□ -1.85
CSTF1-201ENST00000217109 SPRR2FQ96RM1 72 aa3.35□□□□□ -1.87
CSTF1-201ENST00000217109 LOC100996750A0A140TA64 210 aa3.34□□□□□ -1.87
CSTF1-201ENST00000217109 KRTAP4-6Q9BYQ5 205 aa3.34□□□□□ -1.87
CSTF1-201ENST00000217109 KRTAP19-7Q3SYF9 63 aa3.32□□□□□ -1.88
CSTF1-201ENST00000217109 MT1LQ93083 61 aa3.32□□□□□ -1.88
CSTF1-201ENST00000217109 MT1GP13640 62 aa3.31□□□□□ -1.88
CSTF1-201ENST00000217109 DSTQ03001 7570 aaKnown RBP3.31□□□□□ -1.88
CSTF1-201ENST00000217109 MT1EP04732 61 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms