RNA–Protein interactions for RNA: ENST00000216416.8

CNIH1-201, Transcript of cornichon family AMPA receptor auxiliary protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CNIH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH1-201ENST00000216416 LCA10Q71F78 164 aa3.3□□□□□ -1.88
CNIH1-201ENST00000216416 SEC61BP60468 96 aaKnown RBP3.28□□□□□ -1.88
CNIH1-201ENST00000216416 FSIP2Q5CZC0 6907 aa3.28□□□□□ -1.88
CNIH1-201ENST00000216416 KRTAP3-3Q9BYR6 98 aa3.27□□□□□ -1.89
CNIH1-201ENST00000216416 BRK1Q8WUW1 75 aa3.26□□□□□ -1.89
CNIH1-201ENST00000216416 Q5VV11 94 aa3.25□□□□□ -1.89
CNIH1-201ENST00000216416 RBM12B-AS1Q9P1G2 102 aa3.24□□□□□ -1.89
CNIH1-201ENST00000216416 A0A1B0GU69 56 aa3.23□□□□□ -1.89
CNIH1-201ENST00000216416 S4R3F8 94 aa3.23□□□□□ -1.89
CNIH1-201ENST00000216416 A6NED7 52 aa3.23□□□□□ -1.89
CNIH1-201ENST00000216416 SPATA8Q6RVD6 105 aa3.23□□□□□ -1.89
CNIH1-201ENST00000216416 P0C880 135 aa3.22□□□□□ -1.89
CNIH1-201ENST00000216416 Q1T7F1 81 aa3.22□□□□□ -1.89
CNIH1-201ENST00000216416 USH2AO75445 5202 aa3.22□□□□□ -1.89
CNIH1-201ENST00000216416 H1FX-AS1Q4G0G2 97 aa3.21□□□□□ -1.9
CNIH1-201ENST00000216416 LINC01558Q9Y6Z2 57 aa3.2□□□□□ -1.9
CNIH1-201ENST00000216416 KRTAP19-2Q3LHN2 52 aa3.19□□□□□ -1.9
CNIH1-201ENST00000216416 SPTSSBQ8NFR3 76 aa3.19□□□□□ -1.9
CNIH1-201ENST00000216416 FLGP20930 4061 aaPredicted RBP3.19□□□□□ -1.9
CNIH1-201ENST00000216416 A0A0D9SG42 100 aa3.19□□□□□ -1.9
CNIH1-201ENST00000216416 LORP23490 312 aaPredicted RBP3.18□□□□□ -1.9
CNIH1-201ENST00000216416 M0R2T5 61 aa3.17□□□□□ -1.9
CNIH1-201ENST00000216416 LINC01554Q52M75 96 aa3.17□□□□□ -1.9
CNIH1-201ENST00000216416 ADM2Q7Z4H4 148 aa3.17□□□□□ -1.9
CNIH1-201ENST00000216416 KRTAP13-4Q3LI77 160 aa3.16□□□□□ -1.9
CNIH1-201ENST00000216416 KRTAP10-6P60371 365 aaPredicted RBP3.15□□□□□ -1.91
CNIH1-201ENST00000216416 SEC61GP60059 68 aa3.15□□□□□ -1.91
CNIH1-201ENST00000216416 LCE2CQ5TA81 110 aa3.15□□□□□ -1.91
CNIH1-201ENST00000216416 CSAG1Q6PB30 78 aa3.15□□□□□ -1.91
CNIH1-201ENST00000216416 KRTAP3-2Q9BYR7 98 aa3.14□□□□□ -1.91
CNIH1-201ENST00000216416 V9GYY9 64 aa3.13□□□□□ -1.91
CNIH1-201ENST00000216416 A0A1B0GU33 70 aa3.12□□□□□ -1.91
CNIH1-201ENST00000216416 H0YAA0 97 aa3.12□□□□□ -1.91
CNIH1-201ENST00000216416 MIR22HGQ0VDD5 57 aa3.1□□□□□ -1.91
CNIH1-201ENST00000216416 UQCR11O14957 56 aa3.09□□□□□ -1.91
CNIH1-201ENST00000216416 MT1HP80294 61 aa3.08□□□□□ -1.92
CNIH1-201ENST00000216416 M0QZ58 72 aa3.06□□□□□ -1.92
CNIH1-201ENST00000216416 SPINT4Q6UDR6 99 aa3.06□□□□□ -1.92
CNIH1-201ENST00000216416 CRIPTQ9P021 101 aa3.05□□□□□ -1.92
CNIH1-201ENST00000216416 PMAIP1Q13794 54 aa3.05□□□□□ -1.92
CNIH1-201ENST00000216416 R4GN34 69 aa3.05□□□□□ -1.92
CNIH1-201ENST00000216416 CDC42SE1Q9NRR8 79 aa3.04□□□□□ -1.92
CNIH1-201ENST00000216416 PRO0628Q9UI54 55 aa3.04□□□□□ -1.92
CNIH1-201ENST00000216416 KRTAP10-10P60014 251 aa3.01□□□□□ -1.93
CNIH1-201ENST00000216416 KRTAP12-2P59991 146 aa3.01□□□□□ -1.93
CNIH1-201ENST00000216416 MT1FP04733 61 aa3□□□□□ -1.93
CNIH1-201ENST00000216416 PRAC1Q96KF2 57 aa2.98□□□□□ -1.93
CNIH1-201ENST00000216416 KMT2DO14686 5537 aa2.98□□□□□ -1.93
CNIH1-201ENST00000216416 MT2AP02795 61 aa2.97□□□□□ -1.93
CNIH1-201ENST00000216416 KRTAP9-8Q9BYQ0 159 aa2.97□□□□□ -1.93
CNIH1-201ENST00000216416 KRTAP12-1P59990 96 aa2.95□□□□□ -1.94
CNIH1-201ENST00000216416 A6NN06 94 aa2.93□□□□□ -1.94
CNIH1-201ENST00000216416 KRTAP19-1Q8IUB9 90 aa2.92□□□□□ -1.94
CNIH1-201ENST00000216416 C10orf95Q9H7T3 257 aa2.91□□□□□ -1.94
CNIH1-201ENST00000216416 LCE2AQ5TA79 106 aaPredicted RBP2.89□□□□□ -1.95
CNIH1-201ENST00000216416 CAMK2N1Q7Z7J9 78 aa2.88□□□□□ -1.95
CNIH1-201ENST00000216416 SSPOA2VEC9 5147 aa2.87□□□□□ -1.95
CNIH1-201ENST00000216416 K7ERS5 55 aa2.87□□□□□ -1.95
CNIH1-201ENST00000216416 SVIPQ8NHG7 77 aa2.87□□□□□ -1.95
CNIH1-201ENST00000216416 LCE2DQ5TA82 110 aaPredicted RBP2.85□□□□□ -1.95
CNIH1-201ENST00000216416 LCE2BO14633 110 aa2.84□□□□□ -1.95
CNIH1-201ENST00000216416 KRTAP9-3Q9BYQ3 159 aa2.84□□□□□ -1.96
CNIH1-201ENST00000216416 SPRR2GQ9BYE4 73 aa2.81□□□□□ -1.96
CNIH1-201ENST00000216416 KTN1-AS1Q86SY8 53 aa2.81□□□□□ -1.96
CNIH1-201ENST00000216416 MT1BP07438 61 aa2.8□□□□□ -1.96
CNIH1-201ENST00000216416 ROMO1P60602 79 aa2.79□□□□□ -1.96
CNIH1-201ENST00000216416 PLAC4Q8WY50 150 aa2.78□□□□□ -1.96
CNIH1-201ENST00000216416 DSTQ03001 7570 aaKnown RBP2.75□□□□□ -1.97
CNIH1-201ENST00000216416 FCGBPQ9Y6R7 5405 aaPredicted RBP2.72□□□□□ -1.97
CNIH1-201ENST00000216416 MUC12Q9UKN1 5478 aa2.72□□□□□ -1.97
CNIH1-201ENST00000216416 MT1XP80297 61 aa2.72□□□□□ -1.97
CNIH1-201ENST00000216416 KRTAP10-5P60370 271 aa2.71□□□□□ -1.98
CNIH1-201ENST00000216416 KRTAP19-8Q3LI54 63 aa2.71□□□□□ -1.98
CNIH1-201ENST00000216416 KRTAP25-1Q3LHN0 102 aa2.69□□□□□ -1.98
CNIH1-201ENST00000216416 KRTAP10-7P60409 375 aaPredicted RBP2.69□□□□□ -1.98
CNIH1-201ENST00000216416 MACF1Q9UPN3 7388 aaKnown RBP2.69□□□□□ -1.98
CNIH1-201ENST00000216416 SYNE2Q8WXH0 6885 aaKnown RBP2.68□□□□□ -1.98
CNIH1-201ENST00000216416 KRTAP4-8A0A0G2JLE6 195 aa2.68□□□□□ -1.98
CNIH1-201ENST00000216416 KRTAP4-8Q9BYQ9 185 aa2.68□□□□□ -1.98
CNIH1-201ENST00000216416 TNP1P09430 55 aa2.65□□□□□ -1.99
CNIH1-201ENST00000216416 LCE3AQ5TA76 89 aa2.63□□□□□ -1.99
CNIH1-201ENST00000216416 KRTAP9-2Q9BYQ4 174 aa2.59□□□□□ -1.99
CNIH1-201ENST00000216416 OBSCNQ5VST9 7968 aa2.58□□□□□ -2
CNIH1-201ENST00000216416 MDN1Q9NU22 5596 aa2.58□□□□□ -2
CNIH1-201ENST00000216416 KRTAP10-12P60413 245 aa2.57□□□□□ -2
CNIH1-201ENST00000216416 PRO2289Q9P1D8 64 aa2.56□□□□□ -2
CNIH1-201ENST00000216416 SYNE1Q8NF91 8797 aaKnown RBP2.54□□□□□ -2
CNIH1-201ENST00000216416 KRTAP19-5Q3LI72 72 aa2.5□□□□□ -2.01
CNIH1-201ENST00000216416 KRTAP19-6Q3LI70 58 aa2.49□□□□□ -2.01
CNIH1-201ENST00000216416 KRTAP4-7Q9BYR0 210 aa2.48□□□□□ -2.01
CNIH1-201ENST00000216416 KRTAP12-3P60328 96 aa2.48□□□□□ -2.01
CNIH1-201ENST00000216416 CRCT1Q9UGL9 99 aa2.47□□□□□ -2.01
CNIH1-201ENST00000216416 KRTAP8-1Q8IUC2 63 aa2.44□□□□□ -2.02
CNIH1-201ENST00000216416 PP632Q6XCG6 107 aa2.44□□□□□ -2.02
CNIH1-201ENST00000216416 KRTAP19-7Q3SYF9 63 aa2.43□□□□□ -2.02
CNIH1-201ENST00000216416 SPRR2FQ96RM1 72 aa2.4□□□□□ -2.03
CNIH1-201ENST00000216416 KRTAP15-1Q3LI76 137 aa2.4□□□□□ -2.03
CNIH1-201ENST00000216416 KRTAP4-3Q9BYR4 195 aa2.4□□□□□ -2.03
CNIH1-201ENST00000216416 NDUFAF8A1L188 74 aa2.37□□□□□ -2.03
CNIH1-201ENST00000216416 MT1EP04732 61 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms