RNA–Protein interactions for RNA: ENST00000204005.13

LTBP4-201, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LTBP4, Length 5,032 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-201ENST00000204005 DNAH1Q9P2D7 4330 aa8.74□□□□□ -1.01
LTBP4-201ENST00000204005 VPS13DQ5THJ4 4388 aa8.64□□□□□ -1.03
LTBP4-201ENST00000204005 DNAH11Q96DT5 4516 aa8.64□□□□□ -1.03
LTBP4-201ENST00000204005 KRTAP15-1Q3LI76 137 aa8.63□□□□□ -1.03
LTBP4-201ENST00000204005 DNAH10Q8IVF4 4471 aa8.57□□□□□ -1.04
LTBP4-201ENST00000204005 DNAH17Q9UFH2 4485 aa8.56□□□□□ -1.04
LTBP4-201ENST00000204005 DYNC1H1Q14204 4646 aaKnown RBP8.48□□□□□ -1.05
LTBP4-201ENST00000204005 STARD9Q9P2P6 4700 aa8.47□□□□□ -1.05
LTBP4-201ENST00000204005 LRP1BQ9NZR2 4599 aa8.4□□□□□ -1.07
LTBP4-201ENST00000204005 FAT1Q14517 4588 aa8.35□□□□□ -1.07
LTBP4-201ENST00000204005 PRKDCP78527 4128 aaKnown RBP8.35□□□□□ -1.07
LTBP4-201ENST00000204005 DNAH2Q9P225 4427 aa8.32□□□□□ -1.08
LTBP4-201ENST00000204005 ANK2Q01484 3957 aa8.31□□□□□ -1.08
LTBP4-201ENST00000204005 DNAH3Q8TD57 4116 aa8.31□□□□□ -1.08
LTBP4-201ENST00000204005 LORP23490 312 aaPredicted RBP8.28□□□□□ -1.08
LTBP4-201ENST00000204005 DNAH8Q96JB1 4490 aa8.27□□□□□ -1.09
LTBP4-201ENST00000204005 DYNC2H1Q8NCM8 4307 aaKnown RBP8.25□□□□□ -1.09
LTBP4-201ENST00000204005 KRTAP10-12P60413 245 aa8.25□□□□□ -1.09
LTBP4-201ENST00000204005 RYR1P21817 5038 aa8.22□□□□□ -1.09
LTBP4-201ENST00000204005 KRTAP4-1Q9BYQ7 146 aa8.21□□□□□ -1.1
LTBP4-201ENST00000204005 FAT2Q9NYQ8 4349 aa8.2□□□□□ -1.1
LTBP4-201ENST00000204005 KRTAP23-1A1A580 65 aa8.18□□□□□ -1.1
LTBP4-201ENST00000204005 SACSQ9NZJ4 4579 aa8.18□□□□□ -1.1
LTBP4-201ENST00000204005 KMT2AQ03164 3969 aa8.08□□□□□ -1.12
LTBP4-201ENST00000204005 KRTAP12-3P60328 96 aa8.01□□□□□ -1.13
LTBP4-201ENST00000204005 KIAA1109Q2LD37 5005 aa7.99□□□□□ -1.13
LTBP4-201ENST00000204005 MT1HP80294 61 aa7.98□□□□□ -1.13
LTBP4-201ENST00000204005 LCE3AQ5TA76 89 aa7.98□□□□□ -1.13
LTBP4-201ENST00000204005 INE1O15225 51 aa7.97□□□□□ -1.13
LTBP4-201ENST00000204005 APOBP04114 4563 aaKnown RBP7.94□□□□□ -1.14
LTBP4-201ENST00000204005 VPS13BQ7Z7G8 4022 aa7.92□□□□□ -1.14
LTBP4-201ENST00000204005 RYR3Q15413 4870 aa7.92□□□□□ -1.14
LTBP4-201ENST00000204005 CMYA5Q8N3K9 4069 aa7.91□□□□□ -1.14
LTBP4-201ENST00000204005 LYSTQ99698 3801 aa7.88□□□□□ -1.15
LTBP4-201ENST00000204005 DNAH6Q9C0G6 4158 aa7.88□□□□□ -1.15
LTBP4-201ENST00000204005 MT2AP02795 61 aa7.86□□□□□ -1.15
LTBP4-201ENST00000204005 KRTAP17-1Q9BYP8 105 aa7.85□□□□□ -1.15
LTBP4-201ENST00000204005 SPRR2GQ9BYE4 73 aa7.81□□□□□ -1.16
LTBP4-201ENST00000204005 FRAS1Q86XX4 4008 aa7.79□□□□□ -1.16
LTBP4-201ENST00000204005 HECTD4Q9Y4D8 3996 aa7.78□□□□□ -1.16
LTBP4-201ENST00000204005 RYR2Q92736 4967 aa7.78□□□□□ -1.16
LTBP4-201ENST00000204005 MYCBP2O75592 4640 aa7.77□□□□□ -1.17
LTBP4-201ENST00000204005 MT1FP04733 61 aa7.71□□□□□ -1.18
LTBP4-201ENST00000204005 DNAH7Q8WXX0 4024 aa7.7□□□□□ -1.18
LTBP4-201ENST00000204005 CRCT1Q9UGL9 99 aa7.68□□□□□ -1.18
LTBP4-201ENST00000204005 LRP1Q07954 4544 aaKnown RBP7.68□□□□□ -1.18
LTBP4-201ENST00000204005 KRTAP8-1Q8IUC2 63 aa7.63□□□□□ -1.19
LTBP4-201ENST00000204005 FAT3Q8TDW7 4589 aa7.61□□□□□ -1.19
LTBP4-201ENST00000204005 HERC2O95714 4834 aa7.55□□□□□ -1.2
LTBP4-201ENST00000204005 HYDINQ4G0P3 5121 aa7.52□□□□□ -1.21
LTBP4-201ENST00000204005 BIRC6Q9NR09 4857 aa7.47□□□□□ -1.21
LTBP4-201ENST00000204005 HSPG2P98160 4391 aa7.42□□□□□ -1.22
LTBP4-201ENST00000204005 KRTAP19-1Q8IUB9 90 aa7.38□□□□□ -1.23
LTBP4-201ENST00000204005 PKHD1P08F94 4074 aa7.36□□□□□ -1.23
LTBP4-201ENST00000204005 KRTAP19-8Q3LI54 63 aa7.35□□□□□ -1.23
LTBP4-201ENST00000204005 LRP2P98164 4655 aa7.32□□□□□ -1.24
LTBP4-201ENST00000204005 KRTAP19-5Q3LI72 72 aa7.24□□□□□ -1.25
LTBP4-201ENST00000204005 PKD1P98161 4303 aa7.23□□□□□ -1.25
LTBP4-201ENST00000204005 HERC1Q15751 4861 aa7.21□□□□□ -1.25
LTBP4-201ENST00000204005 LCE2CQ5TA81 110 aa7.21□□□□□ -1.26
LTBP4-201ENST00000204005 KRTAP9-8Q9BYQ0 159 aa7.2□□□□□ -1.26
LTBP4-201ENST00000204005 PCLOQ9Y6V0 5065 aa7.18□□□□□ -1.26
LTBP4-201ENST00000204005 KMT2CQ8NEZ4 4911 aaKnown RBP7.17□□□□□ -1.26
LTBP4-201ENST00000204005 SPRR2FQ96RM1 72 aa7.13□□□□□ -1.27
LTBP4-201ENST00000204005 MT1BP07438 61 aa7.11□□□□□ -1.27
LTBP4-201ENST00000204005 KRTAP10-5P60370 271 aa7.1□□□□□ -1.27
LTBP4-201ENST00000204005 KRTAP10-7P60409 375 aaPredicted RBP7.1□□□□□ -1.27
LTBP4-201ENST00000204005 LCE3CQ5T5A8 94 aa7.09□□□□□ -1.27
LTBP4-201ENST00000204005 MT1XP80297 61 aa7.09□□□□□ -1.27
LTBP4-201ENST00000204005 KRTAP19-4Q3LI73 84 aa7.09□□□□□ -1.27
LTBP4-201ENST00000204005 PKHD1L1Q86WI1 4243 aa7.04□□□□□ -1.28
LTBP4-201ENST00000204005 KRTAP9-3Q9BYQ3 159 aa7.01□□□□□ -1.29
LTBP4-201ENST00000204005 SPRR5A0A1B0GTR4 108 aa6.99□□□□□ -1.29
LTBP4-201ENST00000204005 KRTAP19-2Q3LHN2 52 aa6.98□□□□□ -1.29
LTBP4-201ENST00000204005 LPAP08519 4548 aa6.98□□□□□ -1.29
LTBP4-201ENST00000204005 TNXBP22105 4242 aa6.95□□□□□ -1.3
LTBP4-201ENST00000204005 EPPK1P58107 5090 aaKnown RBP6.89□□□□□ -1.31
LTBP4-201ENST00000204005 ABCA13Q86UQ4 5058 aa6.88□□□□□ -1.31
LTBP4-201ENST00000204005 MUC17Q685J3 4493 aa6.82□□□□□ -1.32
LTBP4-201ENST00000204005 FLGP20930 4061 aaPredicted RBP6.75□□□□□ -1.33
LTBP4-201ENST00000204005 KRTAP4-8A0A0G2JLE6 195 aa6.73□□□□□ -1.33
LTBP4-201ENST00000204005 KRTAP4-8Q9BYQ9 185 aa6.73□□□□□ -1.33
LTBP4-201ENST00000204005 LCE2BO14633 110 aa6.7□□□□□ -1.34
LTBP4-201ENST00000204005 SPRR2EP22531 72 aa6.67□□□□□ -1.34
LTBP4-201ENST00000204005 SPRR2BP35325 72 aa6.67□□□□□ -1.34
LTBP4-201ENST00000204005 SPRR2AP35326 72 aa6.67□□□□□ -1.34
LTBP4-201ENST00000204005 MT1GP13640 62 aa6.59□□□□□ -1.35
LTBP4-201ENST00000204005 FAT4Q6V0I7 4981 aa6.51□□□□□ -1.37
LTBP4-201ENST00000204005 RNF213Q63HN8 5207 aa6.5□□□□□ -1.37
LTBP4-201ENST00000204005 SPRR2DP22532 72 aa6.45□□□□□ -1.38
LTBP4-201ENST00000204005 UBR4Q5T4S7 5183 aa6.42□□□□□ -1.38
LTBP4-201ENST00000204005 LCE2AQ5TA79 106 aaPredicted RBP6.42□□□□□ -1.38
LTBP4-201ENST00000204005 KRTAP19-3Q7Z4W3 81 aa6.39□□□□□ -1.39
LTBP4-201ENST00000204005 KRTAP19-6Q3LI70 58 aa6.38□□□□□ -1.39
LTBP4-201ENST00000204005 LCE3BQ5TA77 95 aa6.37□□□□□ -1.39
LTBP4-201ENST00000204005 MT1LQ93083 61 aa6.37□□□□□ -1.39
LTBP4-201ENST00000204005 MT1EP04732 61 aa6.36□□□□□ -1.39
LTBP4-201ENST00000204005 HMCN2Q8NDA2 5059 aa6.33□□□□□ -1.4
LTBP4-201ENST00000204005 KRTAP12-4P60329 112 aa6.3□□□□□ -1.4
LTBP4-201ENST00000204005 KRTAP4-7Q9BYR0 210 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 589 ms