RNA–Protein interactions for RNA: ENST00000066544.7

CDC27-201, Transcript of cell division cycle 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDC27, Length 5,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-201ENST00000066544 LINC01554Q52M75 96 aa4.31□□□□□ -1.72
CDC27-201ENST00000066544 KRTAP10-8P60410 259 aa4.3□□□□□ -1.72
CDC27-201ENST00000066544 HSPG2P98160 4391 aa4.3□□□□□ -1.72
CDC27-201ENST00000066544 FAT3Q8TDW7 4589 aa4.29□□□□□ -1.72
CDC27-201ENST00000066544 KRTAP17-1Q9BYP8 105 aa4.27□□□□□ -1.73
CDC27-201ENST00000066544 XP32Q5T750 250 aa4.27□□□□□ -1.73
CDC27-201ENST00000066544 RPL37P61927 97 aaKnown RBP4.26□□□□□ -1.73
CDC27-201ENST00000066544 RYR3Q15413 4870 aa4.25□□□□□ -1.73
CDC27-201ENST00000066544 K7ERS5 55 aa4.25□□□□□ -1.73
CDC27-201ENST00000066544 KRTAP3-3Q9BYR6 98 aa4.23□□□□□ -1.73
CDC27-201ENST00000066544 KRTAP13-4Q3LI77 160 aa4.22□□□□□ -1.73
CDC27-201ENST00000066544 S4R3F8 94 aa4.22□□□□□ -1.73
CDC27-201ENST00000066544 RYR1P21817 5038 aa4.21□□□□□ -1.73
CDC27-201ENST00000066544 KRTAP10-6P60371 365 aaPredicted RBP4.21□□□□□ -1.73
CDC27-201ENST00000066544 P0C880 135 aa4.21□□□□□ -1.74
CDC27-201ENST00000066544 TNXBP22105 4242 aa4.21□□□□□ -1.74
CDC27-201ENST00000066544 LRP2P98164 4655 aa4.2□□□□□ -1.74
CDC27-201ENST00000066544 KRTAP25-1Q3LHN0 102 aa4.18□□□□□ -1.74
CDC27-201ENST00000066544 MT1HL1P0DM35 61 aa4.17□□□□□ -1.74
CDC27-201ENST00000066544 KRTAP3-2Q9BYR7 98 aa4.17□□□□□ -1.74
CDC27-201ENST00000066544 LPAP08519 4548 aa4.16□□□□□ -1.74
CDC27-201ENST00000066544 SPINT4Q6UDR6 99 aa4.14□□□□□ -1.75
CDC27-201ENST00000066544 ROMO1P60602 79 aa4.12□□□□□ -1.75
CDC27-201ENST00000066544 EPPK1P58107 5090 aaKnown RBP4.12□□□□□ -1.75
CDC27-201ENST00000066544 C10orf95Q9H7T3 257 aa4.11□□□□□ -1.75
CDC27-201ENST00000066544 KRTAP4-5Q9BYR2 181 aa4.09□□□□□ -1.75
CDC27-201ENST00000066544 ABCA13Q86UQ4 5058 aa4.09□□□□□ -1.75
CDC27-201ENST00000066544 KRTAP12-2P59991 146 aa4.08□□□□□ -1.76
CDC27-201ENST00000066544 TPRXLQ17RH7 258 aa4.05□□□□□ -1.76
CDC27-201ENST00000066544 KRTAP12-1P59990 96 aa4.02□□□□□ -1.77
CDC27-201ENST00000066544 M0QZ58 72 aa4.01□□□□□ -1.77
CDC27-201ENST00000066544 H3BS24 57 aa4□□□□□ -1.77
CDC27-201ENST00000066544 R4GN34 69 aa3.98□□□□□ -1.77
CDC27-201ENST00000066544 J3QL48 77 aa3.97□□□□□ -1.77
CDC27-201ENST00000066544 LORP23490 312 aaPredicted RBP3.94□□□□□ -1.78
CDC27-201ENST00000066544 KRTAP4-1Q9BYQ7 146 aa3.94□□□□□ -1.78
CDC27-201ENST00000066544 SEC61BP60468 96 aaKnown RBP3.94□□□□□ -1.78
CDC27-201ENST00000066544 MUC2Q02817 5179 aa3.93□□□□□ -1.78
CDC27-201ENST00000066544 HERC2O95714 4834 aa3.92□□□□□ -1.78
CDC27-201ENST00000066544 MUC17Q685J3 4493 aa3.83□□□□□ -1.8
CDC27-201ENST00000066544 NDUFAF8A1L188 74 aa3.83□□□□□ -1.8
CDC27-201ENST00000066544 CAMK2N1Q7Z7J9 78 aa3.82□□□□□ -1.8
CDC27-201ENST00000066544 KRTAP15-1Q3LI76 137 aa3.78□□□□□ -1.8
CDC27-201ENST00000066544 HERC1Q15751 4861 aa3.78□□□□□ -1.8
CDC27-201ENST00000066544 KRTAP19-2Q3LHN2 52 aa3.76□□□□□ -1.81
CDC27-201ENST00000066544 FAT4Q6V0I7 4981 aa3.75□□□□□ -1.81
CDC27-201ENST00000066544 RNF213Q63HN8 5207 aa3.7□□□□□ -1.82
CDC27-201ENST00000066544 PCLOQ9Y6V0 5065 aa3.69□□□□□ -1.82
CDC27-201ENST00000066544 PLAC4Q8WY50 150 aa3.68□□□□□ -1.82
CDC27-201ENST00000066544 BIRC6Q9NR09 4857 aa3.68□□□□□ -1.82
CDC27-201ENST00000066544 M0R2T5 61 aa3.66□□□□□ -1.82
CDC27-201ENST00000066544 FLGP20930 4061 aaPredicted RBP3.66□□□□□ -1.82
CDC27-201ENST00000066544 HMCN2Q8NDA2 5059 aa3.63□□□□□ -1.83
CDC27-201ENST00000066544 UBR4Q5T4S7 5183 aa3.61□□□□□ -1.83
CDC27-201ENST00000066544 TNP1P09430 55 aa3.59□□□□□ -1.83
CDC27-201ENST00000066544 LCE2CQ5TA81 110 aa3.57□□□□□ -1.84
CDC27-201ENST00000066544 PP632Q6XCG6 107 aa3.57□□□□□ -1.84
CDC27-201ENST00000066544 LUZP6Q538Z0 58 aa3.54□□□□□ -1.84
CDC27-201ENST00000066544 KRTAP10-10P60014 251 aa3.53□□□□□ -1.84
CDC27-201ENST00000066544 KRTAP19-1Q8IUB9 90 aa3.52□□□□□ -1.85
CDC27-201ENST00000066544 MT1HP80294 61 aa3.49□□□□□ -1.85
CDC27-201ENST00000066544 MT1FP04733 61 aa3.47□□□□□ -1.85
CDC27-201ENST00000066544 SPRR2GQ9BYE4 73 aa3.47□□□□□ -1.85
CDC27-201ENST00000066544 MT2AP02795 61 aa3.46□□□□□ -1.86
CDC27-201ENST00000066544 LCE3AQ5TA76 89 aa3.43□□□□□ -1.86
CDC27-201ENST00000066544 KRTAP9-8Q9BYQ0 159 aa3.4□□□□□ -1.87
CDC27-201ENST00000066544 KRTAP23-1A1A580 65 aa3.35□□□□□ -1.87
CDC27-201ENST00000066544 A0A0A0MQY5 61 aa3.33□□□□□ -1.88
CDC27-201ENST00000066544 MT1BP07438 61 aa3.33□□□□□ -1.88
CDC27-201ENST00000066544 USH2AO75445 5202 aa3.31□□□□□ -1.88
CDC27-201ENST00000066544 KRTAP10-5P60370 271 aa3.3□□□□□ -1.88
CDC27-201ENST00000066544 MT1XP80297 61 aa3.3□□□□□ -1.88
CDC27-201ENST00000066544 SPRR5A0A1B0GTR4 108 aa3.3□□□□□ -1.88
CDC27-201ENST00000066544 KRTAP19-8Q3LI54 63 aa3.3□□□□□ -1.88
CDC27-201ENST00000066544 KRTAP10-12P60413 245 aa3.27□□□□□ -1.89
CDC27-201ENST00000066544 KRTAP10-7P60409 375 aaPredicted RBP3.27□□□□□ -1.89
CDC27-201ENST00000066544 KRTAP8-1Q8IUC2 63 aa3.25□□□□□ -1.89
CDC27-201ENST00000066544 KRTAP12-3P60328 96 aa3.24□□□□□ -1.89
CDC27-201ENST00000066544 KRTAP9-3Q9BYQ3 159 aa3.24□□□□□ -1.89
CDC27-201ENST00000066544 KMT2DO14686 5537 aa3.24□□□□□ -1.89
CDC27-201ENST00000066544 LCE2BO14633 110 aa3.17□□□□□ -1.9
CDC27-201ENST00000066544 PRO2289Q9P1D8 64 aa3.17□□□□□ -1.9
CDC27-201ENST00000066544 FSIP2Q5CZC0 6907 aa3.14□□□□□ -1.91
CDC27-201ENST00000066544 KRTAP4-8A0A0G2JLE6 195 aa3.12□□□□□ -1.91
CDC27-201ENST00000066544 KRTAP19-5Q3LI72 72 aa3.12□□□□□ -1.91
CDC27-201ENST00000066544 KRTAP4-8Q9BYQ9 185 aa3.12□□□□□ -1.91
CDC27-201ENST00000066544 LCE2AQ5TA79 106 aaPredicted RBP3.02□□□□□ -1.93
CDC27-201ENST00000066544 LCE3CQ5T5A8 94 aa3.02□□□□□ -1.93
CDC27-201ENST00000066544 KRTAP4-7Q9BYR0 210 aa3.01□□□□□ -1.93
CDC27-201ENST00000066544 KRTAP9-6A8MVA2 160 aa2.96□□□□□ -1.93
CDC27-201ENST00000066544 SSPOA2VEC9 5147 aa2.95□□□□□ -1.94
CDC27-201ENST00000066544 KRTAP19-7Q3SYF9 63 aa2.94□□□□□ -1.94
CDC27-201ENST00000066544 INE1O15225 51 aa2.91□□□□□ -1.94
CDC27-201ENST00000066544 DSTQ03001 7570 aaKnown RBP2.89□□□□□ -1.95
CDC27-201ENST00000066544 MUC12Q9UKN1 5478 aa2.88□□□□□ -1.95
CDC27-201ENST00000066544 FCGBPQ9Y6R7 5405 aaPredicted RBP2.86□□□□□ -1.95
CDC27-201ENST00000066544 MT1LQ93083 61 aa2.86□□□□□ -1.95
CDC27-201ENST00000066544 MT1EP04732 61 aa2.85□□□□□ -1.95
CDC27-201ENST00000066544 KRTAP4-3Q9BYR4 195 aa2.82□□□□□ -1.96
CDC27-201ENST00000066544 CRCT1Q9UGL9 99 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms