RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 IGLV7-46A0A075B6I9 117 aa9.86□□□□□ -0.83
HNRNPU-228ENST00000640306 LINC00483Q53H64 154 aa9.86□□□□□ -0.83
HNRNPU-228ENST00000640306 DNAH17Q9UFH2 4485 aa9.86□□□□□ -0.83
HNRNPU-228ENST00000640306 KRTAP21-3Q3LHN1 58 aa9.86□□□□□ -0.83
HNRNPU-228ENST00000640306 ASB16-AS1Q495Z4 193 aa9.84□□□□□ -0.83
HNRNPU-228ENST00000640306 TP53AIP1Q9HCN2 124 aa9.83□□□□□ -0.84
HNRNPU-228ENST00000640306 ZNF861PO60384 105 aa9.83□□□□□ -0.84
HNRNPU-228ENST00000640306 ZNF706Q9Y5V0 76 aaPredicted RBP9.83□□□□□ -0.84
HNRNPU-228ENST00000640306 MRPL34Q9BQ48 92 aaKnown RBP9.83□□□□□ -0.84
HNRNPU-228ENST00000640306 SPAG11AQ6PDA7 123 aa9.82□□□□□ -0.84
HNRNPU-228ENST00000640306 CIRBP-AS1Q8TBR5 109 aa9.82□□□□□ -0.84
HNRNPU-228ENST00000640306 LIMD2Q9BT23 127 aa9.81□□□□□ -0.84
HNRNPU-228ENST00000640306 Q6ZR54 194 aa9.79□□□□□ -0.84
HNRNPU-228ENST00000640306 SPTSSBQ8NFR3 76 aa9.77□□□□□ -0.84
HNRNPU-228ENST00000640306 PLAC8Q9NZF1 115 aa9.76□□□□□ -0.85
HNRNPU-228ENST00000640306 A6NED7 52 aa9.76□□□□□ -0.85
HNRNPU-228ENST00000640306 Q5W150 140 aa9.76□□□□□ -0.85
HNRNPU-228ENST00000640306 PMAIP1Q13794 54 aa9.74□□□□□ -0.85
HNRNPU-228ENST00000640306 LY6G6CO95867 125 aa9.74□□□□□ -0.85
HNRNPU-228ENST00000640306 HRES1P13985 223 aa9.74□□□□□ -0.85
HNRNPU-228ENST00000640306 DNAH6Q9C0G6 4158 aa9.74□□□□□ -0.85
HNRNPU-228ENST00000640306 RETNLBQ9BQ08 111 aa9.73□□□□□ -0.85
HNRNPU-228ENST00000640306 LCA10Q71F78 164 aa9.71□□□□□ -0.85
HNRNPU-228ENST00000640306 IGLV7-43P04211 117 aa9.7□□□□□ -0.86
HNRNPU-228ENST00000640306 SEC61GP60059 68 aa9.69□□□□□ -0.86
HNRNPU-228ENST00000640306 PRR26Q8N8Z3 221 aa9.68□□□□□ -0.86
HNRNPU-228ENST00000640306 C1orf134Q5TEV5 83 aa9.68□□□□□ -0.86
HNRNPU-228ENST00000640306 Q75L30 129 aa9.68□□□□□ -0.86
HNRNPU-228ENST00000640306 DNAH11Q96DT5 4516 aa9.68□□□□□ -0.86
HNRNPU-228ENST00000640306 LOC101927531A0A1B0GV80 90 aa9.66□□□□□ -0.86
HNRNPU-228ENST00000640306 ALMS1Q8TCU4 4167 aa9.65□□□□□ -0.86
HNRNPU-228ENST00000640306 HYDINQ4G0P3 5121 aa9.64□□□□□ -0.87
HNRNPU-228ENST00000640306 LINC01558Q9Y6Z2 57 aa9.62□□□□□ -0.87
HNRNPU-228ENST00000640306 SPINK7P58062 85 aa9.61□□□□□ -0.87
HNRNPU-228ENST00000640306 KRTAP10-2P60368 255 aa9.61□□□□□ -0.87
HNRNPU-228ENST00000640306 DNAH5Q8TE73 4624 aa9.6□□□□□ -0.87
HNRNPU-228ENST00000640306 KRTAP13-3Q3SY46 172 aa9.59□□□□□ -0.87
HNRNPU-228ENST00000640306 LRP1BQ9NZR2 4599 aa9.57□□□□□ -0.88
HNRNPU-228ENST00000640306 LINC00313P59037 77 aa9.55□□□□□ -0.88
HNRNPU-228ENST00000640306 CDC42SE1Q9NRR8 79 aa9.54□□□□□ -0.88
HNRNPU-228ENST00000640306 KRTAP13-2Q52LG2 175 aa9.53□□□□□ -0.88
HNRNPU-228ENST00000640306 ATP11AUNQ6ZP68 121 aa9.53□□□□□ -0.88
HNRNPU-228ENST00000640306 SSBP3-AS1Q7Z2R9 100 aa9.53□□□□□ -0.88
HNRNPU-228ENST00000640306 ACYP2P14621 99 aa9.49□□□□□ -0.89
HNRNPU-228ENST00000640306 C8orf87E5RJ46 101 aa9.49□□□□□ -0.89
HNRNPU-228ENST00000640306 KRTAP10-1P60331 282 aa9.46□□□□□ -0.9
HNRNPU-228ENST00000640306 IGKV2D-30A0A075B6S6 120 aa9.45□□□□□ -0.9
HNRNPU-228ENST00000640306 A6NN06 94 aa9.45□□□□□ -0.9
HNRNPU-228ENST00000640306 FAM229AH3BQW9 127 aa9.45□□□□□ -0.9
HNRNPU-228ENST00000640306 IGKV2-30P06310 120 aa9.45□□□□□ -0.9
HNRNPU-228ENST00000640306 KTN1-AS1Q86SY8 53 aa9.44□□□□□ -0.9
HNRNPU-228ENST00000640306 DMAC1Q96GE9 116 aa9.42□□□□□ -0.9
HNRNPU-228ENST00000640306 SACSQ9NZJ4 4579 aa9.42□□□□□ -0.9
HNRNPU-228ENST00000640306 VPS13BQ7Z7G8 4022 aa9.41□□□□□ -0.9
HNRNPU-228ENST00000640306 FAT2Q9NYQ8 4349 aa9.4□□□□□ -0.9
HNRNPU-228ENST00000640306 PKD1P98161 4303 aa9.37□□□□□ -0.91
HNRNPU-228ENST00000640306 KRTAP16-1A8MUX0 517 aa9.37□□□□□ -0.91
HNRNPU-228ENST00000640306 KRTAP1-4P0C5Y4 121 aa9.35□□□□□ -0.91
HNRNPU-228ENST00000640306 A0A1B0GU69 56 aa9.35□□□□□ -0.91
HNRNPU-228ENST00000640306 PLA2G1BP04054 148 aaKnown RBP9.34□□□□□ -0.91
HNRNPU-228ENST00000640306 KMT2CQ8NEZ4 4911 aaKnown RBP9.33□□□□□ -0.92
HNRNPU-228ENST00000640306 RBM12B-AS1Q9P1G2 102 aa9.32□□□□□ -0.92
HNRNPU-228ENST00000640306 C4orf48Q5BLP8 95 aa9.31□□□□□ -0.92
HNRNPU-228ENST00000640306 Q6ZSA8 131 aa9.31□□□□□ -0.92
HNRNPU-228ENST00000640306 C7orf65Q6ZTY9 151 aa9.3□□□□□ -0.92
HNRNPU-228ENST00000640306 TYMSOSQ8TAI1 123 aa9.29□□□□□ -0.92
HNRNPU-228ENST00000640306 PKHD1P08F94 4074 aa9.29□□□□□ -0.92
HNRNPU-228ENST00000640306 SPINK1P00995 79 aa9.29□□□□□ -0.92
HNRNPU-228ENST00000640306 Q8N1X5 172 aa9.25□□□□□ -0.93
HNRNPU-228ENST00000640306 RYR2Q92736 4967 aa9.23□□□□□ -0.93
HNRNPU-228ENST00000640306 PRAC1Q96KF2 57 aa9.22□□□□□ -0.93
HNRNPU-228ENST00000640306 ADM2Q7Z4H4 148 aa9.2□□□□□ -0.94
HNRNPU-228ENST00000640306 SMR3BP02814 79 aaPredicted RBP9.18□□□□□ -0.94
HNRNPU-228ENST00000640306 MIR22HGQ0VDD5 57 aa9.17□□□□□ -0.94
HNRNPU-228ENST00000640306 C9orf92A6NGG3 77 aa9.15□□□□□ -0.94
HNRNPU-228ENST00000640306 UQCR11O14957 56 aa9.15□□□□□ -0.95
HNRNPU-228ENST00000640306 FAT1Q14517 4588 aa9.13□□□□□ -0.95
HNRNPU-228ENST00000640306 SPATA8Q6RVD6 105 aa9.13□□□□□ -0.95
HNRNPU-228ENST00000640306 LINC00304Q8N9R0 145 aa9.13□□□□□ -0.95
HNRNPU-228ENST00000640306 DYNC1H1Q14204 4646 aaKnown RBP9.12□□□□□ -0.95
HNRNPU-228ENST00000640306 RYR3Q15413 4870 aa9.09□□□□□ -0.95
HNRNPU-228ENST00000640306 A0A1B0GVY2 172 aa9.07□□□□□ -0.96
HNRNPU-228ENST00000640306 APOBP04114 4563 aaKnown RBP8.98□□□□□ -0.97
HNRNPU-228ENST00000640306 KRTAP3-1Q9BYR8 98 aa8.92□□□□□ -0.98
HNRNPU-228ENST00000640306 A8MUU9 505 aa8.88□□□□□ -0.99
HNRNPU-228ENST00000640306 RPS29P62273 56 aaKnown RBP8.88□□□□□ -0.99
HNRNPU-228ENST00000640306 C20orf166-AS1Q96NR2 134 aa8.87□□□□□ -0.99
HNRNPU-228ENST00000640306 H0YAA0 97 aa8.87□□□□□ -0.99
HNRNPU-228ENST00000640306 CSAG1Q6PB30 78 aa8.87□□□□□ -0.99
HNRNPU-228ENST00000640306 FLG2Q5D862 2391 aaPredicted RBP8.81□□□□□ -1
HNRNPU-228ENST00000640306 PKHD1L1Q86WI1 4243 aa8.8□□□□□ -1
HNRNPU-228ENST00000640306 KRTAP10-4P60372 401 aaPredicted RBP8.8□□□□□ -1
HNRNPU-228ENST00000640306 A0A1B0GU33 70 aa8.8□□□□□ -1
HNRNPU-228ENST00000640306 LINC01554Q52M75 96 aa8.8□□□□□ -1
HNRNPU-228ENST00000640306 LRP1Q07954 4544 aaKnown RBP8.79□□□□□ -1
HNRNPU-228ENST00000640306 EPPK1P58107 5090 aaKnown RBP8.78□□□□□ -1
HNRNPU-228ENST00000640306 DMBT1Q9UGM3 2413 aaPredicted RBP8.78□□□□□ -1
HNRNPU-228ENST00000640306 KIAA1109Q2LD37 5005 aa8.77□□□□□ -1.01
HNRNPU-228ENST00000640306 HSPG2P98160 4391 aa8.76□□□□□ -1.01
HNRNPU-228ENST00000640306 H1FX-AS1Q4G0G2 97 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms