RNA–Protein interactions for RNA: ENST00000639145.1

SCARB2-215, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 4,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-215ENST00000639145 LINC01554Q52M75 96 aa8.15□□□□□ -1.1
SCARB2-215ENST00000639145 OCR1Q9BZK8 76 aa8.15□□□□□ -1.1
SCARB2-215ENST00000639145 MMP24-AS1A0A0U1RRL7 71 aa8.13□□□□□ -1.11
SCARB2-215ENST00000639145 LINC00472Q9H8W2 130 aa8.13□□□□□ -1.11
SCARB2-215ENST00000639145 KRTAP11-1Q8IUC1 163 aa8.11□□□□□ -1.11
SCARB2-215ENST00000639145 A0A087X002 238 aa8.11□□□□□ -1.11
SCARB2-215ENST00000639145 KRTAP4-16G5E9R7 235 aaPredicted RBP8.11□□□□□ -1.11
SCARB2-215ENST00000639145 M0R2T5 61 aa8.11□□□□□ -1.11
SCARB2-215ENST00000639145 UQCR11O14957 56 aa8.1□□□□□ -1.11
SCARB2-215ENST00000639145 ANK3Q12955 4377 aaKnown RBP8.09□□□□□ -1.11
SCARB2-215ENST00000639145 Q8N9P0 234 aaPredicted RBP8.09□□□□□ -1.12
SCARB2-215ENST00000639145 ZCCHC13Q8WW36 166 aaKnown RBP8.07□□□□□ -1.12
SCARB2-215ENST00000639145 HRES1P13985 223 aa8.07□□□□□ -1.12
SCARB2-215ENST00000639145 A0A0D9SG42 100 aa8.04□□□□□ -1.12
SCARB2-215ENST00000639145 SPINK7P58062 85 aa8.03□□□□□ -1.12
SCARB2-215ENST00000639145 KRTAP7-1Q8IUC3 87 aa8.03□□□□□ -1.12
SCARB2-215ENST00000639145 SPANXA2-OT1Q8N9U9 137 aa8.03□□□□□ -1.12
SCARB2-215ENST00000639145 LINC00483Q53H64 154 aa8.02□□□□□ -1.13
SCARB2-215ENST00000639145 PRO0628Q9UI54 55 aa8.01□□□□□ -1.13
SCARB2-215ENST00000639145 MIR22HGQ0VDD5 57 aa7.99□□□□□ -1.13
SCARB2-215ENST00000639145 COL7A1Q02388 2944 aa7.99□□□□□ -1.13
SCARB2-215ENST00000639145 SPINT4Q6UDR6 99 aa7.98□□□□□ -1.13
SCARB2-215ENST00000639145 SEC61BP60468 96 aaKnown RBP7.98□□□□□ -1.13
SCARB2-215ENST00000639145 Q5W150 140 aa7.98□□□□□ -1.13
SCARB2-215ENST00000639145 CYP4F30PQ9H0H9 118 aa7.97□□□□□ -1.13
SCARB2-215ENST00000639145 FBN3Q75N90 2809 aa7.95□□□□□ -1.14
SCARB2-215ENST00000639145 CSMD3Q7Z407 3707 aa7.91□□□□□ -1.14
SCARB2-215ENST00000639145 CSAG1Q6PB30 78 aa7.9□□□□□ -1.14
SCARB2-215ENST00000639145 CYSTM1Q9H1C7 97 aa7.9□□□□□ -1.15
SCARB2-215ENST00000639145 NOTCH2NLQ7Z3S9 236 aa7.87□□□□□ -1.15
SCARB2-215ENST00000639145 FP248Q71RG6 208 aaPredicted RBP7.87□□□□□ -1.15
SCARB2-215ENST00000639145 KRTAP13-2Q52LG2 175 aa7.85□□□□□ -1.15
SCARB2-215ENST00000639145 S4R3F8 94 aa7.83□□□□□ -1.16
SCARB2-215ENST00000639145 A0A1B0GU33 70 aa7.82□□□□□ -1.16
SCARB2-215ENST00000639145 OXTP01178 125 aa7.81□□□□□ -1.16
SCARB2-215ENST00000639145 KRTAP13-1Q8IUC0 172 aa7.81□□□□□ -1.16
SCARB2-215ENST00000639145 CRIPTQ9P021 101 aa7.81□□□□□ -1.16
SCARB2-215ENST00000639145 CAMK2N1Q7Z7J9 78 aa7.81□□□□□ -1.16
SCARB2-215ENST00000639145 KRTAP29-1A8MX34 341 aaPredicted RBP7.76□□□□□ -1.17
SCARB2-215ENST00000639145 AKAP9Q99996 3911 aa7.76□□□□□ -1.17
SCARB2-215ENST00000639145 MEGF8Q7Z7M0 2845 aa7.73□□□□□ -1.17
SCARB2-215ENST00000639145 R4GN34 69 aa7.73□□□□□ -1.17
SCARB2-215ENST00000639145 CDC42SE1Q9NRR8 79 aa7.72□□□□□ -1.17
SCARB2-215ENST00000639145 ASB16-AS1Q495Z4 193 aa7.68□□□□□ -1.18
SCARB2-215ENST00000639145 Q1T7F1 81 aa7.68□□□□□ -1.18
SCARB2-215ENST00000639145 RPS29P62273 56 aaKnown RBP7.66□□□□□ -1.18
SCARB2-215ENST00000639145 LINC01558Q9Y6Z2 57 aa7.64□□□□□ -1.19
SCARB2-215ENST00000639145 DMAC1Q96GE9 116 aa7.63□□□□□ -1.19
SCARB2-215ENST00000639145 Q5XG85 94 aa7.6□□□□□ -1.19
SCARB2-215ENST00000639145 M0QZ58 72 aa7.58□□□□□ -1.2
SCARB2-215ENST00000639145 Q75L30 129 aa7.57□□□□□ -1.2
SCARB2-215ENST00000639145 KRTAP1-4P0C5Y4 121 aa7.57□□□□□ -1.2
SCARB2-215ENST00000639145 DNHD1Q96M86 4753 aa7.55□□□□□ -1.2
SCARB2-215ENST00000639145 RPL37P61927 97 aaKnown RBP7.53□□□□□ -1.2
SCARB2-215ENST00000639145 ADM2Q7Z4H4 148 aa7.52□□□□□ -1.2
SCARB2-215ENST00000639145 Q5VV11 94 aa7.51□□□□□ -1.21
SCARB2-215ENST00000639145 H1FX-AS1Q4G0G2 97 aa7.5□□□□□ -1.21
SCARB2-215ENST00000639145 LCA10Q71F78 164 aa7.49□□□□□ -1.21
SCARB2-215ENST00000639145 KTN1-AS1Q86SY8 53 aa7.48□□□□□ -1.21
SCARB2-215ENST00000639145 SPATA8Q6RVD6 105 aa7.46□□□□□ -1.21
SCARB2-215ENST00000639145 C20orf166-AS1Q96NR2 134 aa7.44□□□□□ -1.22
SCARB2-215ENST00000639145 A8MUU9 505 aa7.41□□□□□ -1.22
SCARB2-215ENST00000639145 HUWE1Q7Z6Z7 4374 aaKnown RBP7.38□□□□□ -1.23
SCARB2-215ENST00000639145 XP32Q5T750 250 aa7.37□□□□□ -1.23
SCARB2-215ENST00000639145 PLAC4Q8WY50 150 aa7.36□□□□□ -1.23
SCARB2-215ENST00000639145 PRAC1Q96KF2 57 aa7.35□□□□□ -1.23
SCARB2-215ENST00000639145 A0A1B0GVY2 172 aa7.35□□□□□ -1.23
SCARB2-215ENST00000639145 A8MU10 97 aa7.27□□□□□ -1.25
SCARB2-215ENST00000639145 LUZP6Q538Z0 58 aa7.25□□□□□ -1.25
SCARB2-215ENST00000639145 TPRXLQ17RH7 258 aa7.24□□□□□ -1.25
SCARB2-215ENST00000639145 ROMO1P60602 79 aa7.22□□□□□ -1.25
SCARB2-215ENST00000639145 KRTAP10-8P60410 259 aa7.2□□□□□ -1.26
SCARB2-215ENST00000639145 DNAH9Q9NYC9 4486 aa7.18□□□□□ -1.26
SCARB2-215ENST00000639145 KRTAP13-3Q3SY46 172 aa7.18□□□□□ -1.26
SCARB2-215ENST00000639145 PLECQ15149 4684 aaKnown RBP7.17□□□□□ -1.26
SCARB2-215ENST00000639145 KRTAP16-1A8MUX0 517 aa7.14□□□□□ -1.27
SCARB2-215ENST00000639145 DNAH10Q8IVF4 4471 aa7.12□□□□□ -1.27
SCARB2-215ENST00000639145 PRKDCP78527 4128 aaKnown RBP7.11□□□□□ -1.27
SCARB2-215ENST00000639145 ANK2Q01484 3957 aa7.08□□□□□ -1.28
SCARB2-215ENST00000639145 STARD9Q9P2P6 4700 aa7.04□□□□□ -1.28
SCARB2-215ENST00000639145 DNAH11Q96DT5 4516 aa7.03□□□□□ -1.28
SCARB2-215ENST00000639145 KRTAP10-10P60014 251 aa7□□□□□ -1.29
SCARB2-215ENST00000639145 DNAH5Q8TE73 4624 aa6.97□□□□□ -1.29
SCARB2-215ENST00000639145 FAT1Q14517 4588 aa6.93□□□□□ -1.3
SCARB2-215ENST00000639145 LYSTQ99698 3801 aa6.93□□□□□ -1.3
SCARB2-215ENST00000639145 KRTAP4-5Q9BYR2 181 aa6.91□□□□□ -1.3
SCARB2-215ENST00000639145 DNAH1Q9P2D7 4330 aa6.91□□□□□ -1.3
SCARB2-215ENST00000639145 KMT2AQ03164 3969 aa6.91□□□□□ -1.3
SCARB2-215ENST00000639145 TNP1P09430 55 aa6.9□□□□□ -1.3
SCARB2-215ENST00000639145 P0C880 135 aa6.89□□□□□ -1.31
SCARB2-215ENST00000639145 A6NN06 94 aa6.84□□□□□ -1.31
SCARB2-215ENST00000639145 KIAA1109Q2LD37 5005 aa6.79□□□□□ -1.32
SCARB2-215ENST00000639145 KRTAP25-1Q3LHN0 102 aa6.79□□□□□ -1.32
SCARB2-215ENST00000639145 H0YAA0 97 aa6.78□□□□□ -1.32
SCARB2-215ENST00000639145 MT1HL1P0DM35 61 aa6.77□□□□□ -1.33
SCARB2-215ENST00000639145 RYR1P21817 5038 aa6.76□□□□□ -1.33
SCARB2-215ENST00000639145 DNAH8Q96JB1 4490 aa6.74□□□□□ -1.33
SCARB2-215ENST00000639145 DYNC1H1Q14204 4646 aaKnown RBP6.73□□□□□ -1.33
SCARB2-215ENST00000639145 LRP1BQ9NZR2 4599 aa6.73□□□□□ -1.33
SCARB2-215ENST00000639145 VPS13DQ5THJ4 4388 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms