RNA–Protein interactions for RNA: ENST00000638448.1

GYPB-216, Transcript of glycophorin B (MNS blood group), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GYPB, Length 363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-216ENST00000638448 TACC2O95359 2948 aa-0.17□□□□□ -2.44
GYPB-216ENST00000638448 AKAP9Q99996 3911 aa-0.17□□□□□ -2.44
GYPB-216ENST00000638448 MGAM2Q2M2H8 2515 aa-0.17□□□□□ -2.44
GYPB-216ENST00000638448 PKHD1L1Q86WI1 4243 aa-0.17□□□□□ -2.44
GYPB-216ENST00000638448 LINC01549A6NIU2 74 aa-0.17□□□□□ -2.44
GYPB-216ENST00000638448 LAMA5O15230 3695 aa-0.17□□□□□ -2.44
GYPB-216ENST00000638448 MT1AP04731 61 aa-0.17□□□□□ -2.44
GYPB-216ENST00000638448 RPS27P42677 84 aaKnown RBP-0.17□□□□□ -2.44
GYPB-216ENST00000638448 RPS27LQ71UM5 84 aaKnown RBP-0.17□□□□□ -2.44
GYPB-216ENST00000638448 C6orf48Q9UBA6 75 aa-0.17□□□□□ -2.44
GYPB-216ENST00000638448 INO80Q9ULG1 1556 aaPredicted RBP-0.17□□□□□ -2.44
GYPB-216ENST00000638448 ZZEF1O43149 2961 aa-0.17□□□□□ -2.44
GYPB-216ENST00000638448 ABCC6O95255 1503 aa-0.18□□□□□ -2.44
GYPB-216ENST00000638448 DSTQ03001 7570 aaKnown RBP-0.18□□□□□ -2.44
GYPB-216ENST00000638448 DMXL1Q9Y485 3027 aa-0.18□□□□□ -2.44
GYPB-216ENST00000638448 PARP4Q9UKK3 1724 aaKnown RBP-0.18□□□□□ -2.44
GYPB-216ENST00000638448 DNMBPQ6XZF7 1577 aa-0.18□□□□□ -2.44
GYPB-216ENST00000638448 FCER1GP30273 86 aa-0.18□□□□□ -2.44
GYPB-216ENST00000638448 KRTAP19-8Q3LI54 63 aa-0.18□□□□□ -2.44
GYPB-216ENST00000638448 SPRR2FQ96RM1 72 aa-0.18□□□□□ -2.44
GYPB-216ENST00000638448 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.18□□□□□ -2.44
GYPB-216ENST00000638448 ABCA9Q8IUA7 1624 aa-0.18□□□□□ -2.44
GYPB-216ENST00000638448 STARD9Q9P2P6 4700 aa-0.18□□□□□ -2.44
GYPB-216ENST00000638448 MUC17Q685J3 4493 aa-0.19□□□□□ -2.44
GYPB-216ENST00000638448 NCBP2-AS2Q69YL0 99 aa-0.19□□□□□ -2.44
GYPB-216ENST00000638448 NHSQ6T4R5 1651 aa-0.19□□□□□ -2.44
GYPB-216ENST00000638448 ACACBO00763 2458 aa-0.19□□□□□ -2.44
GYPB-216ENST00000638448 SACSQ9NZJ4 4579 aa-0.2□□□□□ -2.44
GYPB-216ENST00000638448 USP9YO00507 2555 aaPredicted RBP-0.2□□□□□ -2.44
GYPB-216ENST00000638448 H3BUA1 57 aa-0.2□□□□□ -2.44
GYPB-216ENST00000638448 K7EMI3 77 aa-0.2□□□□□ -2.44
GYPB-216ENST00000638448 SFTA3P0C7M3 94 aa-0.2□□□□□ -2.44
GYPB-216ENST00000638448 DEFB110Q30KQ9 67 aa-0.2□□□□□ -2.44
GYPB-216ENST00000638448 ANKRD36CQ5JPF3 1778 aa-0.2□□□□□ -2.44
GYPB-216ENST00000638448 MACF1Q9UPN3 7388 aaKnown RBP-0.2□□□□□ -2.44
GYPB-216ENST00000638448 BPTFQ12830 3046 aa-0.2□□□□□ -2.44
GYPB-216ENST00000638448 ITPR3Q14573 2671 aa-0.2□□□□□ -2.44
GYPB-216ENST00000638448 ITSN2Q9NZM3 1697 aa-0.21□□□□□ -2.44
GYPB-216ENST00000638448 EFCAB5A4FU69 1503 aa-0.21□□□□□ -2.44
GYPB-216ENST00000638448 NBEAQ8NFP9 2946 aa-0.21□□□□□ -2.44
GYPB-216ENST00000638448 NBEAL2Q6ZNJ1 2754 aa-0.21□□□□□ -2.44
GYPB-216ENST00000638448 MADDQ8WXG6 1647 aa-0.21□□□□□ -2.44
GYPB-216ENST00000638448 C3P01024 1663 aa-0.21□□□□□ -2.44
GYPB-216ENST00000638448 KIF1AQ12756 1690 aa-0.21□□□□□ -2.44
GYPB-216ENST00000638448 UBR4Q5T4S7 5183 aa-0.21□□□□□ -2.44
GYPB-216ENST00000638448 DNAH2Q9P225 4427 aa-0.22□□□□□ -2.44
GYPB-216ENST00000638448 IGLV5-48A0A075B6I7 105 aa-0.22□□□□□ -2.44
GYPB-216ENST00000638448 A0A087WWC5 75 aa-0.22□□□□□ -2.44
GYPB-216ENST00000638448 M0R1W7 72 aa-0.22□□□□□ -2.44
GYPB-216ENST00000638448 TOGARAM1Q9Y4F4 1720 aa-0.22□□□□□ -2.44
GYPB-216ENST00000638448 DNAH8Q96JB1 4490 aa-0.22□□□□□ -2.45
GYPB-216ENST00000638448 DNAH1Q9P2D7 4330 aa-0.23□□□□□ -2.45
GYPB-216ENST00000638448 TLN2Q9Y4G6 2542 aa-0.23□□□□□ -2.45
GYPB-216ENST00000638448 USP9XQ93008 2570 aaPredicted RBP-0.23□□□□□ -2.45
GYPB-216ENST00000638448 SERF2P84101 59 aa-0.23□□□□□ -2.45
GYPB-216ENST00000638448 NMES1Q9C002 83 aa-0.23□□□□□ -2.45
GYPB-216ENST00000638448 NOP10Q9NPE3 64 aaKnown RBP-0.23□□□□□ -2.45
GYPB-216ENST00000638448 MROH1Q8NDA8 1641 aa-0.24□□□□□ -2.45
GYPB-216ENST00000638448 MMP24-AS1A0A0U1RRL7 71 aa-0.24□□□□□ -2.45
GYPB-216ENST00000638448 HTTP42858 3142 aa-0.24□□□□□ -2.45
GYPB-216ENST00000638448 S100ZQ8WXG8 99 aa-0.25□□□□□ -2.45
GYPB-216ENST00000638448 CLASP1Q7Z460 1538 aa-0.25□□□□□ -2.45
GYPB-216ENST00000638448 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.26□□□□□ -2.45
GYPB-216ENST00000638448 SMIM31A0A1B0GVY4 71 aa-0.26□□□□□ -2.45
GYPB-216ENST00000638448 TNP1P09430 55 aa-0.26□□□□□ -2.45
GYPB-216ENST00000638448 KRTAP20-2Q3LI61 65 aa-0.26□□□□□ -2.45
GYPB-216ENST00000638448 SMIM5Q71RC9 77 aa-0.26□□□□□ -2.45
GYPB-216ENST00000638448 TMEM167BQ9NRX6 74 aa-0.26□□□□□ -2.45
GYPB-216ENST00000638448 ABRACLQ9P1F3 81 aa-0.26□□□□□ -2.45
GYPB-216ENST00000638448 KALRNO60229 2985 aa-0.26□□□□□ -2.45
GYPB-216ENST00000638448 WDR87Q6ZQQ6 2873 aa-0.26□□□□□ -2.45
GYPB-216ENST00000638448 ABCA6Q8N139 1617 aa-0.27□□□□□ -2.45
GYPB-216ENST00000638448 TIAM1Q13009 1591 aa-0.27□□□□□ -2.45
GYPB-216ENST00000638448 EEA1Q15075 1411 aa-0.27□□□□□ -2.45
GYPB-216ENST00000638448 LAMA1P25391 3075 aa-0.27□□□□□ -2.45
GYPB-216ENST00000638448 IGIPA6NJ69 53 aa-0.27□□□□□ -2.45
GYPB-216ENST00000638448 LINC00308Q8TCZ7 52 aa-0.27□□□□□ -2.45
GYPB-216ENST00000638448 CCDC180Q9P1Z9 1646 aa-0.27□□□□□ -2.45
GYPB-216ENST00000638448 GLI2P10070 1586 aa-0.28□□□□□ -2.45
GYPB-216ENST00000638448 HERC2O95714 4834 aa-0.28□□□□□ -2.45
GYPB-216ENST00000638448 CDC42BPAQ5VT25 1732 aa-0.28□□□□□ -2.45
GYPB-216ENST00000638448 CROCC2H7BZ55 1655 aa-0.28□□□□□ -2.45
GYPB-216ENST00000638448 SPTAN1Q13813 2472 aaKnown RBP-0.28□□□□□ -2.45
GYPB-216ENST00000638448 USH2AO75445 5202 aa-0.29□□□□□ -2.46
GYPB-216ENST00000638448 PLECQ15149 4684 aaKnown RBP-0.29□□□□□ -2.46
GYPB-216ENST00000638448 LY75O60449 1722 aa-0.29□□□□□ -2.46
GYPB-216ENST00000638448 SMIM27A0A1W2PRY6 76 aa-0.29□□□□□ -2.46
GYPB-216ENST00000638448 MT4P47944 62 aa-0.29□□□□□ -2.46
GYPB-216ENST00000638448 CLPSL2Q6UWE3 100 aa-0.29□□□□□ -2.46
GYPB-216ENST00000638448 KAAG1Q9UBP8 84 aa-0.29□□□□□ -2.46
GYPB-216ENST00000638448 CPS1P31327 1500 aa-0.29□□□□□ -2.46
GYPB-216ENST00000638448 DOPEY1Q5JWR5 2465 aa-0.3□□□□□ -2.46
GYPB-216ENST00000638448 H0YGX0 51 aa-0.3□□□□□ -2.46
GYPB-216ENST00000638448 M0QY20 66 aa-0.3□□□□□ -2.46
GYPB-216ENST00000638448 DEFB1P60022 68 aa-0.3□□□□□ -2.46
GYPB-216ENST00000638448 RANBP2P49792 3224 aaKnown RBP-0.3□□□□□ -2.46
GYPB-216ENST00000638448 UGGT1Q9NYU2 1555 aa-0.31□□□□□ -2.46
GYPB-216ENST00000638448 ABCA10Q8WWZ4 1543 aa-0.31□□□□□ -2.46
GYPB-216ENST00000638448 RYR1P21817 5038 aa-0.31□□□□□ -2.46
GYPB-216ENST00000638448 KRTAP19-5Q3LI72 72 aa-0.31□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms