RNA–Protein interactions for RNA: ENST00000638448.1

GYPB-216, Transcript of glycophorin B (MNS blood group), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GYPB, Length 363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-216ENST00000638448 AEBP2Q6ZN18 517 aaPredicted RBP15.8■□□□□ 0.12
GYPB-216ENST00000638448 CHIC1Q5VXU3 224 aa15.1■□□□□ 0.01
GYPB-216ENST00000638448 SENP3Q9H4L4 574 aaPredicted RBP13.43□□□□□ -0.26
GYPB-216ENST00000638448 PHF23Q9BUL5 403 aaPredicted RBP13.26□□□□□ -0.29
GYPB-216ENST00000638448 FOXD1Q16676 465 aa12.52□□□□□ -0.41
GYPB-216ENST00000638448 PLPPR3Q6T4P5 718 aa12.11□□□□□ -0.47
GYPB-216ENST00000638448 PPP6R1Q9UPN7 881 aa11.8□□□□□ -0.52
GYPB-216ENST00000638448 ADRA2BP18089 450 aa11.77□□□□□ -0.53
GYPB-216ENST00000638448 PIAS4Q8N2W9 510 aaPredicted RBP11.74□□□□□ -0.53
GYPB-216ENST00000638448 MSH5O43196 834 aa11.65□□□□□ -0.54
GYPB-216ENST00000638448 POTEDQ86YR6 584 aa11.38□□□□□ -0.59
GYPB-216ENST00000638448 MAPK8IP2Q13387 824 aaPredicted RBP10.77□□□□□ -0.69
GYPB-216ENST00000638448 SCAF1Q9H7N4 1312 aaKnown RBP10.71□□□□□ -0.69
GYPB-216ENST00000638448 DMRT2Q9Y5R5 561 aa10.68□□□□□ -0.7
GYPB-216ENST00000638448 PPP4R3CPQ6ZMV5 832 aa10.64□□□□□ -0.71
GYPB-216ENST00000638448 CNKSR2Q8WXI2 1034 aa10.4□□□□□ -0.74
GYPB-216ENST00000638448 HOXD11P31277 338 aaPredicted RBP10.32□□□□□ -0.76
GYPB-216ENST00000638448 RNF216Q9NWF9 866 aaPredicted RBP10.27□□□□□ -0.77
GYPB-216ENST00000638448 DCAF8L1A6NGE4 600 aa10.24□□□□□ -0.77
GYPB-216ENST00000638448 NCBP3Q53F19 620 aaKnown RBP10.23□□□□□ -0.77
GYPB-216ENST00000638448 NPM3O75607 178 aaKnown RBP10.13□□□□□ -0.79
GYPB-216ENST00000638448 KCNA4P22459 653 aa10.06□□□□□ -0.8
GYPB-216ENST00000638448 RNF39Q9H2S5 420 aa9.96□□□□□ -0.82
GYPB-216ENST00000638448 CACNB1Q02641 598 aaPredicted RBP9.92□□□□□ -0.82
GYPB-216ENST00000638448 DNAJC5BQ9UF47 199 aa9.92□□□□□ -0.82
GYPB-216ENST00000638448 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.84□□□□□ -0.83
GYPB-216ENST00000638448 C1QBPQ07021 282 aaKnown RBP9.8□□□□□ -0.84
GYPB-216ENST00000638448 U3KPZ7 1027 aaPredicted RBP9.67□□□□□ -0.86
GYPB-216ENST00000638448 SLC4A2P04920 1241 aa9.65□□□□□ -0.86
GYPB-216ENST00000638448 SLC4A1APQ9BWU0 796 aaKnown RBP9.51□□□□□ -0.89
GYPB-216ENST00000638448 SPINK5Q9NQ38 1064 aaPredicted RBP9.49□□□□□ -0.89
GYPB-216ENST00000638448 CAPN15O75808 1086 aa9.46□□□□□ -0.9
GYPB-216ENST00000638448 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.38□□□□□ -0.91
GYPB-216ENST00000638448 HNRNPUL2Q1KMD3 747 aaKnown RBP9.38□□□□□ -0.91
GYPB-216ENST00000638448 DSG3P32926 999 aa9.37□□□□□ -0.91
GYPB-216ENST00000638448 MYCNP04198 464 aaPredicted RBP9.36□□□□□ -0.91
GYPB-216ENST00000638448 APLP2Q06481 763 aa9.36□□□□□ -0.91
GYPB-216ENST00000638448 SAMD1Q6SPF0 538 aaPredicted RBP9.36□□□□□ -0.91
GYPB-216ENST00000638448 FOXD4L1Q9NU39 408 aa9.34□□□□□ -0.91
GYPB-216ENST00000638448 TRHP20396 242 aaPredicted RBP9.33□□□□□ -0.92
GYPB-216ENST00000638448 ZNF219Q9P2Y4 722 aaPredicted RBP9.31□□□□□ -0.92
GYPB-216ENST00000638448 ZBTB22O15209 634 aa9.27□□□□□ -0.93
GYPB-216ENST00000638448 ABCB7O75027 752 aa9.27□□□□□ -0.93
GYPB-216ENST00000638448 ATF5Q9Y2D1 282 aaPredicted RBP9.16□□□□□ -0.94
GYPB-216ENST00000638448 POLA2Q14181 598 aa9.1□□□□□ -0.95
GYPB-216ENST00000638448 ATXN8OSP0DMR3 200 aa9□□□□□ -0.97
GYPB-216ENST00000638448 CSRNP3Q8WYN3 585 aa8.92□□□□□ -0.98
GYPB-216ENST00000638448 RBM42Q9BTD8 480 aaKnown RBP8.92□□□□□ -0.98
GYPB-216ENST00000638448 ZBTB12Q9Y330 459 aaPredicted RBP8.92□□□□□ -0.98
GYPB-216ENST00000638448 POTEHQ6S545 545 aa8.9□□□□□ -0.98
GYPB-216ENST00000638448 EHMT2Q96KQ7 1210 aa8.9□□□□□ -0.98
GYPB-216ENST00000638448 OSCARQ8IYS5 282 aa8.84□□□□□ -0.99
GYPB-216ENST00000638448 FBLN2P98095 1184 aa8.76□□□□□ -1.01
GYPB-216ENST00000638448 MKRN4PQ13434 485 aaPredicted RBP8.74□□□□□ -1.01
GYPB-216ENST00000638448 AKT1S1Q96B36 256 aa8.74□□□□□ -1.01
GYPB-216ENST00000638448 CHRDL2Q6WN34 429 aa8.7□□□□□ -1.02
GYPB-216ENST00000638448 REM2Q8IYK8 340 aaPredicted RBP8.67□□□□□ -1.02
GYPB-216ENST00000638448 SPDYE2BA6NHP3 402 aa8.65□□□□□ -1.02
GYPB-216ENST00000638448 SPDYE6P0CI01 402 aa8.65□□□□□ -1.02
GYPB-216ENST00000638448 SPDYE2Q495Y8 402 aa8.65□□□□□ -1.02
GYPB-216ENST00000638448 PITPNM1O00562 1244 aa8.6□□□□□ -1.03
GYPB-216ENST00000638448 SSUH2Q9Y2M2 353 aa8.58□□□□□ -1.04
GYPB-216ENST00000638448 ZNF692Q9BU19 519 aaPredicted RBP8.56□□□□□ -1.04
GYPB-216ENST00000638448 PIP4P2Q8N4L2 257 aa8.52□□□□□ -1.05
GYPB-216ENST00000638448 SPDYE1Q8NFV5 336 aaPredicted RBP8.48□□□□□ -1.05
GYPB-216ENST00000638448 FXR2P51116 673 aaKnown RBP eCLIP8.47□□□□□ -1.05
GYPB-216ENST00000638448 PABPN1Q86U42 306 aaKnown RBP eCLIP8.47□□□□□ -1.05
GYPB-216ENST00000638448 CLEC11AQ9Y240 323 aa8.46□□□□□ -1.06
GYPB-216ENST00000638448 SPDYE4A6NLX3 237 aa8.37□□□□□ -1.07
GYPB-216ENST00000638448 PRKAR2AP13861 404 aaKnown RBP8.36□□□□□ -1.07
GYPB-216ENST00000638448 SP7Q8TDD2 431 aaPredicted RBP8.33□□□□□ -1.08
GYPB-216ENST00000638448 PRR29P0C7W0 189 aa8.32□□□□□ -1.08
GYPB-216ENST00000638448 HAX1O00165 279 aa8.31□□□□□ -1.08
GYPB-216ENST00000638448 CHADLQ6NUI6 762 aa8.31□□□□□ -1.08
GYPB-216ENST00000638448 EVX2Q03828 476 aa8.25□□□□□ -1.09
GYPB-216ENST00000638448 STAG3Q9UJ98 1225 aa8.21□□□□□ -1.1
GYPB-216ENST00000638448 C19orf67A6NJJ6 358 aa8.2□□□□□ -1.1
GYPB-216ENST00000638448 PROM2Q8N271 834 aa8.19□□□□□ -1.1
GYPB-216ENST00000638448 CREBZFQ9NS37 354 aa8.18□□□□□ -1.1
GYPB-216ENST00000638448 FARP1Q9Y4F1 1045 aaPredicted RBP8.18□□□□□ -1.1
GYPB-216ENST00000638448 CD44P16070 742 aaKnown RBP8.11□□□□□ -1.11
GYPB-216ENST00000638448 FKBP8Q14318 412 aa8.09□□□□□ -1.11
GYPB-216ENST00000638448 MNX1P50219 401 aaPredicted RBP8.05□□□□□ -1.12
GYPB-216ENST00000638448 GABBR2O75899 941 aa8.04□□□□□ -1.12
GYPB-216ENST00000638448 ZRANB1Q9UGI0 708 aa8.01□□□□□ -1.13
GYPB-216ENST00000638448 NPM1P06748 294 aaKnown RBP eCLIP7.99□□□□□ -1.13
GYPB-216ENST00000638448 ZNF579Q8NAF0 562 aaKnown RBP7.99□□□□□ -1.13
GYPB-216ENST00000638448 PAK3O75914 559 aaPredicted RBP7.95□□□□□ -1.14
GYPB-216ENST00000638448 MIER1Q8N108 512 aa7.95□□□□□ -1.14
GYPB-216ENST00000638448 CLCN6P51797 869 aa7.94□□□□□ -1.14
GYPB-216ENST00000638448 PHF12Q96QT6 1004 aa7.94□□□□□ -1.14
GYPB-216ENST00000638448 PLEKHG5O94827 1062 aa7.92□□□□□ -1.14
GYPB-216ENST00000638448 PLCD3Q8N3E9 789 aa7.91□□□□□ -1.14
GYPB-216ENST00000638448 GALR2O43603 387 aaPredicted RBP7.9□□□□□ -1.14
GYPB-216ENST00000638448 POTEIP0CG38 1075 aa7.9□□□□□ -1.14
GYPB-216ENST00000638448 TSPYL2Q9H2G4 693 aaPredicted RBP7.89□□□□□ -1.15
GYPB-216ENST00000638448 RASEFQ8IZ41 740 aa7.86□□□□□ -1.15
GYPB-216ENST00000638448 DCBLD2Q96PD2 775 aa7.85□□□□□ -1.15
GYPB-216ENST00000638448 FBXO3Q9UK99 471 aa7.84□□□□□ -1.15
GYPB-216ENST00000638448 CCDC61Q9Y6R9 512 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms