RNA–Protein interactions for RNA: ENST00000637432.1

CACNA1A-240, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,809 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-240ENST00000637432 ZZEF1O43149 2961 aa9.33□□□□□ -0.92
CACNA1A-240ENST00000637432 LRBAP50851 2863 aa9.3□□□□□ -0.92
CACNA1A-240ENST00000637432 SPRR1AP35321 89 aa9.29□□□□□ -0.92
CACNA1A-240ENST00000637432 NDUFAF8A1L188 74 aa9.29□□□□□ -0.92
CACNA1A-240ENST00000637432 ZNF292O60281 2723 aa9.26□□□□□ -0.93
CACNA1A-240ENST00000637432 NOTCH2NLQ7Z3S9 236 aa9.25□□□□□ -0.93
CACNA1A-240ENST00000637432 IGSF10Q6WRI0 2623 aa9.24□□□□□ -0.93
CACNA1A-240ENST00000637432 UTP20O75691 2785 aaKnown RBP9.24□□□□□ -0.93
CACNA1A-240ENST00000637432 LOC400499M0QZD8 3231 aa9.23□□□□□ -0.93
CACNA1A-240ENST00000637432 NBPF19A0A087WUL8 3843 aa9.22□□□□□ -0.93
CACNA1A-240ENST00000637432 KRTAP25-1Q3LHN0 102 aa9.22□□□□□ -0.93
CACNA1A-240ENST00000637432 FRYLO94915 3013 aa9.22□□□□□ -0.93
CACNA1A-240ENST00000637432 ZFHX4Q86UP3 3567 aa9.2□□□□□ -0.94
CACNA1A-240ENST00000637432 ITPR1Q14643 2758 aa9.16□□□□□ -0.94
CACNA1A-240ENST00000637432 ADGRG4Q8IZF6 3080 aa9.14□□□□□ -0.95
CACNA1A-240ENST00000637432 DCHS1Q96JQ0 3298 aa9.13□□□□□ -0.95
CACNA1A-240ENST00000637432 KRTAP10-10P60014 251 aa9.13□□□□□ -0.95
CACNA1A-240ENST00000637432 TNRC18O15417 2968 aaPredicted RBP9.1□□□□□ -0.95
CACNA1A-240ENST00000637432 UBR5O95071 2799 aaPredicted RBP9.1□□□□□ -0.95
CACNA1A-240ENST00000637432 CHD9Q3L8U1 2897 aa9.1□□□□□ -0.95
CACNA1A-240ENST00000637432 LAMA5O15230 3695 aa9.09□□□□□ -0.95
CACNA1A-240ENST00000637432 A6NN06 94 aa9.06□□□□□ -0.96
CACNA1A-240ENST00000637432 EYSQ5T1H1 3165 aa9.02□□□□□ -0.97
CACNA1A-240ENST00000637432 KRTAP11-1Q8IUC1 163 aa9.01□□□□□ -0.97
CACNA1A-240ENST00000637432 PRO2289Q9P1D8 64 aa8.96□□□□□ -0.98
CACNA1A-240ENST00000637432 KRTAP29-1A8MX34 341 aaPredicted RBP8.93□□□□□ -0.98
CACNA1A-240ENST00000637432 HIVEP1P15822 2718 aa8.92□□□□□ -0.98
CACNA1A-240ENST00000637432 CELSR1Q9NYQ6 3014 aa8.91□□□□□ -0.98
CACNA1A-240ENST00000637432 DMXL1Q9Y485 3027 aa8.9□□□□□ -0.99
CACNA1A-240ENST00000637432 NBEAQ8NFP9 2946 aa8.88□□□□□ -0.99
CACNA1A-240ENST00000637432 KRTAP13-2Q52LG2 175 aa8.88□□□□□ -0.99
CACNA1A-240ENST00000637432 RELNP78509 3460 aa8.87□□□□□ -0.99
CACNA1A-240ENST00000637432 TACC2O95359 2948 aa8.84□□□□□ -0.99
CACNA1A-240ENST00000637432 TENM1Q9UKZ4 2725 aa8.84□□□□□ -1
CACNA1A-240ENST00000637432 RPS29P62273 56 aaKnown RBP8.82□□□□□ -1
CACNA1A-240ENST00000637432 KRTAP4-16G5E9R7 235 aaPredicted RBP8.82□□□□□ -1
CACNA1A-240ENST00000637432 Q6ZRN7 208 aaPredicted RBP8.81□□□□□ -1
CACNA1A-240ENST00000637432 FLNCQ14315 2725 aa8.73□□□□□ -1.01
CACNA1A-240ENST00000637432 CELSR2Q9HCU4 2923 aa8.73□□□□□ -1.01
CACNA1A-240ENST00000637432 CSMD1Q96PZ7 3565 aa8.72□□□□□ -1.01
CACNA1A-240ENST00000637432 PP632Q6XCG6 107 aa8.69□□□□□ -1.02
CACNA1A-240ENST00000637432 SPENQ96T58 3664 aaKnown RBP8.68□□□□□ -1.02
CACNA1A-240ENST00000637432 XP32Q5T750 250 aa8.66□□□□□ -1.02
CACNA1A-240ENST00000637432 NF1P21359 2839 aa8.61□□□□□ -1.03
CACNA1A-240ENST00000637432 KRTAP21-3Q3LHN1 58 aa8.56□□□□□ -1.04
CACNA1A-240ENST00000637432 SMG1Q96Q15 3661 aaKnown RBP8.54□□□□□ -1.04
CACNA1A-240ENST00000637432 KRTAP7-1Q8IUC3 87 aa8.53□□□□□ -1.04
CACNA1A-240ENST00000637432 ZFHX3Q15911 3703 aa8.5□□□□□ -1.05
CACNA1A-240ENST00000637432 TENM3Q9P273 2699 aa8.49□□□□□ -1.05
CACNA1A-240ENST00000637432 NIPBLQ6KC79 2804 aaeCLIP8.47□□□□□ -1.05
CACNA1A-240ENST00000637432 CRCT1Q9UGL9 99 aa8.46□□□□□ -1.06
CACNA1A-240ENST00000637432 VWFP04275 2813 aa8.44□□□□□ -1.06
CACNA1A-240ENST00000637432 DCHS2Q6V1P9 2916 aa8.44□□□□□ -1.06
CACNA1A-240ENST00000637432 ZANQ9Y493 2812 aa8.42□□□□□ -1.06
CACNA1A-240ENST00000637432 PKD1L1Q8TDX9 2849 aa8.41□□□□□ -1.06
CACNA1A-240ENST00000637432 PDZD2O15018 2839 aa8.41□□□□□ -1.06
CACNA1A-240ENST00000637432 TPRXLQ17RH7 258 aa8.4□□□□□ -1.06
CACNA1A-240ENST00000637432 CUBNO60494 3623 aa8.39□□□□□ -1.07
CACNA1A-240ENST00000637432 KRTAP13-1Q8IUC0 172 aa8.38□□□□□ -1.07
CACNA1A-240ENST00000637432 H0YAA0 97 aa8.37□□□□□ -1.07
CACNA1A-240ENST00000637432 TGP01266 2768 aa8.36□□□□□ -1.07
CACNA1A-240ENST00000637432 DMDP11532 3685 aa8.33□□□□□ -1.08
CACNA1A-240ENST00000637432 KRTAP12-2P59991 146 aa8.32□□□□□ -1.08
CACNA1A-240ENST00000637432 TENM4Q6N022 2769 aa8.31□□□□□ -1.08
CACNA1A-240ENST00000637432 MUC3AQ02505 3323 aa8.22□□□□□ -1.09
CACNA1A-240ENST00000637432 FBN2P35556 2912 aa8.22□□□□□ -1.09
CACNA1A-240ENST00000637432 SRRM2Q9UQ35 2752 aaKnown RBP8.21□□□□□ -1.1
CACNA1A-240ENST00000637432 KRTAP15-1Q3LI76 137 aa8.18□□□□□ -1.1
CACNA1A-240ENST00000637432 KRTAP1-4P0C5Y4 121 aa8.17□□□□□ -1.1
CACNA1A-240ENST00000637432 KRTAP13-3Q3SY46 172 aa8.15□□□□□ -1.1
CACNA1A-240ENST00000637432 TENM2Q9NT68 2774 aa8.14□□□□□ -1.11
CACNA1A-240ENST00000637432 CSMD2Q7Z408 3487 aa8.11□□□□□ -1.11
CACNA1A-240ENST00000637432 SVEP1Q4LDE5 3571 aa8.1□□□□□ -1.11
CACNA1A-240ENST00000637432 MEGF8Q7Z7M0 2845 aa8.08□□□□□ -1.12
CACNA1A-240ENST00000637432 HRNRQ86YZ3 2850 aaPredicted RBP7.98□□□□□ -1.13
CACNA1A-240ENST00000637432 CSMD3Q7Z407 3707 aa7.94□□□□□ -1.14
CACNA1A-240ENST00000637432 COL7A1Q02388 2944 aa7.93□□□□□ -1.14
CACNA1A-240ENST00000637432 MXRA5Q9NR99 2828 aa7.9□□□□□ -1.14
CACNA1A-240ENST00000637432 VPS13CQ709C8 3753 aa7.88□□□□□ -1.15
CACNA1A-240ENST00000637432 KRTAP13-4Q3LI77 160 aa7.86□□□□□ -1.15
CACNA1A-240ENST00000637432 TRRAPQ9Y4A5 3859 aa7.69□□□□□ -1.18
CACNA1A-240ENST00000637432 KRTAP12-1P59990 96 aa7.68□□□□□ -1.18
CACNA1A-240ENST00000637432 INE1O15225 51 aa7.61□□□□□ -1.19
CACNA1A-240ENST00000637432 LORP23490 312 aaPredicted RBP7.57□□□□□ -1.2
CACNA1A-240ENST00000637432 KRTAP10-6P60371 365 aaPredicted RBP7.55□□□□□ -1.2
CACNA1A-240ENST00000637432 KRTAP10-12P60413 245 aa7.54□□□□□ -1.2
CACNA1A-240ENST00000637432 OTOGQ6ZRI0 2925 aa7.48□□□□□ -1.21
CACNA1A-240ENST00000637432 KRTAP10-5P60370 271 aa7.44□□□□□ -1.22
CACNA1A-240ENST00000637432 BSNQ9UPA5 3926 aa7.42□□□□□ -1.22
CACNA1A-240ENST00000637432 FBN3Q75N90 2809 aa7.4□□□□□ -1.22
CACNA1A-240ENST00000637432 FBN1P35555 2871 aaKnown RBP7.36□□□□□ -1.23
CACNA1A-240ENST00000637432 AKAP9Q99996 3911 aa7.34□□□□□ -1.23
CACNA1A-240ENST00000637432 KRTAP8-1Q8IUC2 63 aa7.25□□□□□ -1.25
CACNA1A-240ENST00000637432 KRTAP3-1Q9BYR8 98 aa7.21□□□□□ -1.26
CACNA1A-240ENST00000637432 KRTAP12-3P60328 96 aa7.18□□□□□ -1.26
CACNA1A-240ENST00000637432 KRTAP4-5Q9BYR2 181 aa7.14□□□□□ -1.27
CACNA1A-240ENST00000637432 LCE3AQ5TA76 89 aa7.12□□□□□ -1.27
CACNA1A-240ENST00000637432 ZNF469Q96JG9 3925 aaPredicted RBP7.02□□□□□ -1.29
CACNA1A-240ENST00000637432 FRAS1Q86XX4 4008 aa6.93□□□□□ -1.3
CACNA1A-240ENST00000637432 ANK3Q12955 4377 aaKnown RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms