RNA–Protein interactions for RNA: ENST00000636822.2

TCF4-281, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-281ENST00000636822 CSMD1Q96PZ7 3565 aa2.8□□□□□ -1.96
TCF4-281ENST00000636822 TRIOO75962 3097 aa2.8□□□□□ -1.96
TCF4-281ENST00000636822 RELNP78509 3460 aa2.8□□□□□ -1.96
TCF4-281ENST00000636822 TRANK1O15050 2925 aa2.8□□□□□ -1.96
TCF4-281ENST00000636822 KALRNO60229 2985 aa2.8□□□□□ -1.96
TCF4-281ENST00000636822 TEP1Q99973 2627 aaKnown RBP2.78□□□□□ -1.96
TCF4-281ENST00000636822 UTP20O75691 2785 aaKnown RBP2.78□□□□□ -1.96
TCF4-281ENST00000636822 UBR5O95071 2799 aaPredicted RBP2.78□□□□□ -1.96
TCF4-281ENST00000636822 APCP25054 2843 aa2.78□□□□□ -1.96
TCF4-281ENST00000636822 Q5VSD8 79 aa2.78□□□□□ -1.97
TCF4-281ENST00000636822 MGAM2Q2M2H8 2515 aa2.77□□□□□ -1.97
TCF4-281ENST00000636822 ATRQ13535 2644 aa2.77□□□□□ -1.97
TCF4-281ENST00000636822 CMYA5Q8N3K9 4069 aa2.76□□□□□ -1.97
TCF4-281ENST00000636822 ANKRD11Q6UB99 2663 aaPredicted RBP2.76□□□□□ -1.97
TCF4-281ENST00000636822 KRTAP1-5Q9BYS1 174 aa2.76□□□□□ -1.97
TCF4-281ENST00000636822 ANK2Q01484 3957 aa2.75□□□□□ -1.97
TCF4-281ENST00000636822 STAB1Q9NY15 2570 aa2.73□□□□□ -1.97
TCF4-281ENST00000636822 NBEAL2Q6ZNJ1 2754 aa2.73□□□□□ -1.97
TCF4-281ENST00000636822 NBEAQ8NFP9 2946 aa2.72□□□□□ -1.97
TCF4-281ENST00000636822 FRYQ5TBA9 3013 aa2.71□□□□□ -1.98
TCF4-281ENST00000636822 KRTAP7-1Q8IUC3 87 aa2.71□□□□□ -1.98
TCF4-281ENST00000636822 MAP1AP78559 2803 aaPredicted RBP2.71□□□□□ -1.98
TCF4-281ENST00000636822 KRTAP10-2P60368 255 aa2.71□□□□□ -1.98
TCF4-281ENST00000636822 KRTAP17-1Q9BYP8 105 aa2.71□□□□□ -1.98
TCF4-281ENST00000636822 FRYLO94915 3013 aa2.7□□□□□ -1.98
TCF4-281ENST00000636822 Q6ZRN7 208 aaPredicted RBP2.7□□□□□ -1.98
TCF4-281ENST00000636822 ASH1LQ9NR48 2969 aaKnown RBP2.69□□□□□ -1.98
TCF4-281ENST00000636822 IGSF10Q6WRI0 2623 aa2.69□□□□□ -1.98
TCF4-281ENST00000636822 KRTAP10-1P60331 282 aa2.69□□□□□ -1.98
TCF4-281ENST00000636822 TEX15Q9BXT5 2789 aa2.68□□□□□ -1.98
TCF4-281ENST00000636822 SETXQ7Z333 2677 aaKnown RBP2.68□□□□□ -1.98
TCF4-281ENST00000636822 KRTAP12-2P59991 146 aa2.67□□□□□ -1.98
TCF4-281ENST00000636822 ITPR3Q14573 2671 aa2.66□□□□□ -1.98
TCF4-281ENST00000636822 CELSR2Q9HCU4 2923 aa2.66□□□□□ -1.98
TCF4-281ENST00000636822 TRRAPQ9Y4A5 3859 aa2.66□□□□□ -1.98
TCF4-281ENST00000636822 SVEP1Q4LDE5 3571 aa2.66□□□□□ -1.98
TCF4-281ENST00000636822 CUBNO60494 3623 aa2.66□□□□□ -1.98
TCF4-281ENST00000636822 MAST4O15021 2626 aa2.66□□□□□ -1.98
TCF4-281ENST00000636822 COL12A1Q99715 3063 aa2.66□□□□□ -1.98
TCF4-281ENST00000636822 LOC400499M0QZD8 3231 aa2.65□□□□□ -1.99
TCF4-281ENST00000636822 DMXL1Q9Y485 3027 aa2.64□□□□□ -1.99
TCF4-281ENST00000636822 TGP01266 2768 aa2.64□□□□□ -1.99
TCF4-281ENST00000636822 KRTAP13-1Q8IUC0 172 aa2.63□□□□□ -1.99
TCF4-281ENST00000636822 RYR1P21817 5038 aa2.63□□□□□ -1.99
TCF4-281ENST00000636822 CFAP47Q6ZTR5 3102 aa2.62□□□□□ -1.99
TCF4-281ENST00000636822 ZNF469Q96JG9 3925 aaPredicted RBP2.62□□□□□ -1.99
TCF4-281ENST00000636822 ZNF292O60281 2723 aa2.62□□□□□ -1.99
TCF4-281ENST00000636822 RPS29P62273 56 aaKnown RBP2.62□□□□□ -1.99
TCF4-281ENST00000636822 CSMD2Q7Z408 3487 aa2.61□□□□□ -1.99
TCF4-281ENST00000636822 KRTAP13-3Q3SY46 172 aa2.61□□□□□ -1.99
TCF4-281ENST00000636822 KMT2BQ9UMN6 2715 aaPredicted RBP2.6□□□□□ -1.99
TCF4-281ENST00000636822 KRTAP13-2Q52LG2 175 aa2.6□□□□□ -1.99
TCF4-281ENST00000636822 ZZEF1O43149 2961 aa2.6□□□□□ -1.99
TCF4-281ENST00000636822 KRTAP13-4Q3LI77 160 aa2.6□□□□□ -1.99
TCF4-281ENST00000636822 TACC2O95359 2948 aa2.6□□□□□ -1.99
TCF4-281ENST00000636822 KRTAP12-1P59990 96 aa2.6□□□□□ -1.99
TCF4-281ENST00000636822 FLNAP21333 2647 aaKnown RBP2.59□□□□□ -2
TCF4-281ENST00000636822 DNAH7Q8WXX0 4024 aa2.59□□□□□ -2
TCF4-281ENST00000636822 DMXL2Q8TDJ6 3036 aa2.58□□□□□ -2
TCF4-281ENST00000636822 MUC3AQ02505 3323 aa2.56□□□□□ -2
TCF4-281ENST00000636822 BOD1L1Q8NFC6 3051 aa2.56□□□□□ -2
TCF4-281ENST00000636822 XP32Q5T750 250 aa2.56□□□□□ -2
TCF4-281ENST00000636822 CRYBG3Q68DQ2 2970 aa2.56□□□□□ -2
TCF4-281ENST00000636822 ITPR2Q14571 2701 aa2.55□□□□□ -2
TCF4-281ENST00000636822 FRAS1Q86XX4 4008 aa2.55□□□□□ -2
TCF4-281ENST00000636822 A0A1B0GVY2 172 aa2.54□□□□□ -2
TCF4-281ENST00000636822 HIVEP1P15822 2718 aa2.54□□□□□ -2
TCF4-281ENST00000636822 ATMQ13315 3056 aa2.54□□□□□ -2
TCF4-281ENST00000636822 DNAH3Q8TD57 4116 aa2.53□□□□□ -2
TCF4-281ENST00000636822 PDZD2O15018 2839 aa2.53□□□□□ -2.01
TCF4-281ENST00000636822 LYSTQ99698 3801 aa2.52□□□□□ -2.01
TCF4-281ENST00000636822 DCHS2Q6V1P9 2916 aa2.52□□□□□ -2.01
TCF4-281ENST00000636822 PRKDCP78527 4128 aaKnown RBP2.5□□□□□ -2.01
TCF4-281ENST00000636822 ADGRG4Q8IZF6 3080 aa2.5□□□□□ -2.01
TCF4-281ENST00000636822 NF1P21359 2839 aa2.5□□□□□ -2.01
TCF4-281ENST00000636822 FLNBO75369 2602 aaKnown RBP2.49□□□□□ -2.01
TCF4-281ENST00000636822 TENM3Q9P273 2699 aa2.48□□□□□ -2.01
TCF4-281ENST00000636822 OTOGQ6ZRI0 2925 aa2.48□□□□□ -2.01
TCF4-281ENST00000636822 CSMD3Q7Z407 3707 aa2.46□□□□□ -2.02
TCF4-281ENST00000636822 CELSR1Q9NYQ6 3014 aa2.46□□□□□ -2.02
TCF4-281ENST00000636822 KRTAP1-4P0C5Y4 121 aa2.45□□□□□ -2.02
TCF4-281ENST00000636822 ANK3Q12955 4377 aaKnown RBP2.45□□□□□ -2.02
TCF4-281ENST00000636822 KRTAP10-6P60371 365 aaPredicted RBP2.44□□□□□ -2.02
TCF4-281ENST00000636822 ALMS1Q8TCU4 4167 aa2.42□□□□□ -2.02
TCF4-281ENST00000636822 LCE2DQ5TA82 110 aaPredicted RBP2.42□□□□□ -2.02
TCF4-281ENST00000636822 HECTD4Q9Y4D8 3996 aa2.42□□□□□ -2.02
TCF4-281ENST00000636822 FLNCQ14315 2725 aa2.41□□□□□ -2.02
TCF4-281ENST00000636822 TENM1Q9UKZ4 2725 aa2.41□□□□□ -2.02
TCF4-281ENST00000636822 DNAH6Q9C0G6 4158 aa2.41□□□□□ -2.02
TCF4-281ENST00000636822 KRTAP3-1Q9BYR8 98 aa2.41□□□□□ -2.02
TCF4-281ENST00000636822 COL7A1Q02388 2944 aa2.39□□□□□ -2.03
TCF4-281ENST00000636822 DNHD1Q96M86 4753 aa2.39□□□□□ -2.03
TCF4-281ENST00000636822 KRTAP10-10P60014 251 aa2.38□□□□□ -2.03
TCF4-281ENST00000636822 KRTAP21-3Q3LHN1 58 aa2.38□□□□□ -2.03
TCF4-281ENST00000636822 NIPBLQ6KC79 2804 aaeCLIP2.38□□□□□ -2.03
TCF4-281ENST00000636822 KMT2AQ03164 3969 aa2.38□□□□□ -2.03
TCF4-281ENST00000636822 HRNRQ86YZ3 2850 aaPredicted RBP2.37□□□□□ -2.03
TCF4-281ENST00000636822 HUWE1Q7Z6Z7 4374 aaKnown RBP2.37□□□□□ -2.03
TCF4-281ENST00000636822 TENM2Q9NT68 2774 aa2.36□□□□□ -2.03
TCF4-281ENST00000636822 TENM4Q6N022 2769 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms