RNA–Protein interactions for RNA: ENST00000635865.1

ATRX-220, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 100 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-220ENST00000635865 MAP1BP46821 2468 aaKnown RBP0.35□□□□□ -2.35
ATRX-220ENST00000635865 CACNA1AO00555 2505 aa0.34□□□□□ -2.35
ATRX-220ENST00000635865 H3BNG1 76 aa0.34□□□□□ -2.36
ATRX-220ENST00000635865 HRNRQ86YZ3 2850 aaPredicted RBP0.34□□□□□ -2.36
ATRX-220ENST00000635865 IGSF10Q6WRI0 2623 aa0.34□□□□□ -2.36
ATRX-220ENST00000635865 ACANP16112 2415 aa0.33□□□□□ -2.36
ATRX-220ENST00000635865 HECTD4Q9Y4D8 3996 aa0.33□□□□□ -2.36
ATRX-220ENST00000635865 M0QY20 66 aa0.33□□□□□ -2.36
ATRX-220ENST00000635865 SPRR2BP35325 72 aa0.33□□□□□ -2.36
ATRX-220ENST00000635865 NF1P21359 2839 aa0.33□□□□□ -2.36
ATRX-220ENST00000635865 TENM3Q9P273 2699 aa0.33□□□□□ -2.36
ATRX-220ENST00000635865 DNAH3Q8TD57 4116 aa0.33□□□□□ -2.36
ATRX-220ENST00000635865 PKD1L2Q7Z442 2459 aa0.32□□□□□ -2.36
ATRX-220ENST00000635865 NSD1Q96L73 2696 aaPredicted RBP0.32□□□□□ -2.36
ATRX-220ENST00000635865 AHNAKQ09666 5890 aaKnown RBP0.32□□□□□ -2.36
ATRX-220ENST00000635865 SACSQ9NZJ4 4579 aa0.32□□□□□ -2.36
ATRX-220ENST00000635865 MMP24-AS1A0A0U1RRL7 71 aa0.32□□□□□ -2.36
ATRX-220ENST00000635865 FAT4Q6V0I7 4981 aa0.32□□□□□ -2.36
ATRX-220ENST00000635865 DCHS2Q6V1P9 2916 aa0.31□□□□□ -2.36
ATRX-220ENST00000635865 ZZEF1O43149 2961 aa0.31□□□□□ -2.36
ATRX-220ENST00000635865 APC2O95996 2303 aa0.31□□□□□ -2.36
ATRX-220ENST00000635865 PDZD2O15018 2839 aa0.31□□□□□ -2.36
ATRX-220ENST00000635865 MAST4O15021 2626 aa0.31□□□□□ -2.36
ATRX-220ENST00000635865 NBASA2RRP1 2371 aa0.31□□□□□ -2.36
ATRX-220ENST00000635865 WNK1Q9H4A3 2382 aa0.31□□□□□ -2.36
ATRX-220ENST00000635865 FLNBO75369 2602 aaKnown RBP0.3□□□□□ -2.36
ATRX-220ENST00000635865 PKHD1P08F94 4074 aa0.3□□□□□ -2.36
ATRX-220ENST00000635865 HSPG2P98160 4391 aa0.3□□□□□ -2.36
ATRX-220ENST00000635865 A8MTW9 85 aa0.3□□□□□ -2.36
ATRX-220ENST00000635865 PKHD1L1Q86WI1 4243 aa0.29□□□□□ -2.36
ATRX-220ENST00000635865 SRRM2Q9UQ35 2752 aaKnown RBP0.29□□□□□ -2.36
ATRX-220ENST00000635865 MUC5BQ9HC84 5762 aaPredicted RBP0.29□□□□□ -2.36
ATRX-220ENST00000635865 GCN1Q92616 2671 aaKnown RBP0.29□□□□□ -2.36
ATRX-220ENST00000635865 FLNCQ14315 2725 aa0.29□□□□□ -2.36
ATRX-220ENST00000635865 LRP1BQ9NZR2 4599 aa0.28□□□□□ -2.36
ATRX-220ENST00000635865 SPTBN4Q9H254 2564 aa0.28□□□□□ -2.36
ATRX-220ENST00000635865 ANK3Q12955 4377 aaKnown RBP0.28□□□□□ -2.36
ATRX-220ENST00000635865 DNAH2Q9P225 4427 aa0.28□□□□□ -2.36
ATRX-220ENST00000635865 DNAH11Q96DT5 4516 aa0.28□□□□□ -2.36
ATRX-220ENST00000635865 COL7A1Q02388 2944 aa0.27□□□□□ -2.37
ATRX-220ENST00000635865 DNAH9Q9NYC9 4486 aa0.27□□□□□ -2.37
ATRX-220ENST00000635865 HTTP42858 3142 aa0.27□□□□□ -2.37
ATRX-220ENST00000635865 COL6A3P12111 3177 aa0.27□□□□□ -2.37
ATRX-220ENST00000635865 AKAP9Q99996 3911 aa0.27□□□□□ -2.37
ATRX-220ENST00000635865 FLGP20930 4061 aaPredicted RBP0.27□□□□□ -2.37
ATRX-220ENST00000635865 M0QZ58 72 aa0.27□□□□□ -2.37
ATRX-220ENST00000635865 TNP1P09430 55 aa0.27□□□□□ -2.37
ATRX-220ENST00000635865 TACC2O95359 2948 aa0.27□□□□□ -2.37
ATRX-220ENST00000635865 DMXL1Q9Y485 3027 aa0.27□□□□□ -2.37
ATRX-220ENST00000635865 CUBNO60494 3623 aa0.26□□□□□ -2.37
ATRX-220ENST00000635865 PHGR1C9JFL3 82 aa0.26□□□□□ -2.37
ATRX-220ENST00000635865 SPRR2AP35326 72 aa0.26□□□□□ -2.37
ATRX-220ENST00000635865 DEFB110Q30KQ9 67 aa0.26□□□□□ -2.37
ATRX-220ENST00000635865 FAT3Q8TDW7 4589 aa0.25□□□□□ -2.37
ATRX-220ENST00000635865 ANKRD11Q6UB99 2663 aaPredicted RBP0.25□□□□□ -2.37
ATRX-220ENST00000635865 HMCN2Q8NDA2 5059 aa0.25□□□□□ -2.37
ATRX-220ENST00000635865 APOBP04114 4563 aaKnown RBP0.25□□□□□ -2.37
ATRX-220ENST00000635865 FLNAP21333 2647 aaKnown RBP0.24□□□□□ -2.37
ATRX-220ENST00000635865 SETD2Q9BYW2 2564 aaPredicted RBP0.24□□□□□ -2.37
ATRX-220ENST00000635865 KALRNO60229 2985 aa0.24□□□□□ -2.37
ATRX-220ENST00000635865 DNAH6Q9C0G6 4158 aa0.24□□□□□ -2.37
ATRX-220ENST00000635865 MTORP42345 2549 aa0.24□□□□□ -2.37
ATRX-220ENST00000635865 RANBP2P49792 3224 aaKnown RBP0.24□□□□□ -2.37
ATRX-220ENST00000635865 MDN1Q9NU22 5596 aa0.24□□□□□ -2.37
ATRX-220ENST00000635865 DUOX1Q9NRD9 1551 aa0.23□□□□□ -2.37
ATRX-220ENST00000635865 DYNC2H1Q8NCM8 4307 aaKnown RBP0.23□□□□□ -2.37
ATRX-220ENST00000635865 MROH2BQ7Z745 1585 aa0.23□□□□□ -2.37
ATRX-220ENST00000635865 MAP1AP78559 2803 aaPredicted RBP0.23□□□□□ -2.37
ATRX-220ENST00000635865 STAB1Q9NY15 2570 aa0.22□□□□□ -2.37
ATRX-220ENST00000635865 SPENQ96T58 3664 aaKnown RBP0.22□□□□□ -2.37
ATRX-220ENST00000635865 DMBT1Q9UGM3 2413 aaPredicted RBP0.22□□□□□ -2.37
ATRX-220ENST00000635865 TENM2Q9NT68 2774 aa0.22□□□□□ -2.37
ATRX-220ENST00000635865 POLR2KP53803 58 aaKnown RBP0.22□□□□□ -2.37
ATRX-220ENST00000635865 KRTAP6-2Q3LI66 62 aa0.22□□□□□ -2.37
ATRX-220ENST00000635865 UTP20O75691 2785 aaKnown RBP0.22□□□□□ -2.37
ATRX-220ENST00000635865 GCC2Q8IWJ2 1684 aa0.21□□□□□ -2.38
ATRX-220ENST00000635865 VPS13DQ5THJ4 4388 aa0.21□□□□□ -2.38
ATRX-220ENST00000635865 LRP2P98164 4655 aa0.21□□□□□ -2.38
ATRX-220ENST00000635865 SONP18583 2426 aaKnown RBP0.21□□□□□ -2.38
ATRX-220ENST00000635865 TGP01266 2768 aa0.21□□□□□ -2.38
ATRX-220ENST00000635865 ZANQ9Y493 2812 aa0.2□□□□□ -2.38
ATRX-220ENST00000635865 MUC5ACP98088 5654 aa0.2□□□□□ -2.38
ATRX-220ENST00000635865 LRRK2Q5S007 2527 aa0.2□□□□□ -2.38
ATRX-220ENST00000635865 SNRPGP62308 76 aaKnown RBP0.2□□□□□ -2.38
ATRX-220ENST00000635865 DNAH7Q8WXX0 4024 aa0.2□□□□□ -2.38
ATRX-220ENST00000635865 ANKHD1Q8IWZ3 2542 aaKnown RBP0.2□□□□□ -2.38
ATRX-220ENST00000635865 NBEAQ8NFP9 2946 aa0.2□□□□□ -2.38
ATRX-220ENST00000635865 TRIOO75962 3097 aa0.19□□□□□ -2.38
ATRX-220ENST00000635865 ACACAQ13085 2346 aa0.19□□□□□ -2.38
ATRX-220ENST00000635865 DNAH1Q9P2D7 4330 aa0.19□□□□□ -2.38
ATRX-220ENST00000635865 MT1AP04731 61 aa0.19□□□□□ -2.38
ATRX-220ENST00000635865 SPRR2EP22531 72 aa0.19□□□□□ -2.38
ATRX-220ENST00000635865 CLPSL2Q6UWE3 100 aa0.19□□□□□ -2.38
ATRX-220ENST00000635865 SVEP1Q4LDE5 3571 aa0.19□□□□□ -2.38
ATRX-220ENST00000635865 FRYQ5TBA9 3013 aa0.19□□□□□ -2.38
ATRX-220ENST00000635865 SPG11Q96JI7 2443 aa0.18□□□□□ -2.38
ATRX-220ENST00000635865 NBPF19A0A087WUL8 3843 aa0.18□□□□□ -2.38
ATRX-220ENST00000635865 HIVEP1P15822 2718 aa0.18□□□□□ -2.38
ATRX-220ENST00000635865 TEP1Q99973 2627 aaKnown RBP0.17□□□□□ -2.38
ATRX-220ENST00000635865 COL6A5A8TX70 2615 aa0.17□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms