RNA–Protein interactions for RNA: ENST00000635865.1

ATRX-220, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 100 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-220ENST00000635865 AEBP2Q6ZN18 517 aaPredicted RBP11.47□□□□□ -0.57
ATRX-220ENST00000635865 CHIC1Q5VXU3 224 aa10.62□□□□□ -0.71
ATRX-220ENST00000635865 SENP3Q9H4L4 574 aaPredicted RBP9.79□□□□□ -0.84
ATRX-220ENST00000635865 PHF23Q9BUL5 403 aaPredicted RBP9.62□□□□□ -0.87
ATRX-220ENST00000635865 POTEDQ86YR6 584 aa9.42□□□□□ -0.9
ATRX-220ENST00000635865 FOXD1Q16676 465 aa9.22□□□□□ -0.93
ATRX-220ENST00000635865 MSH5O43196 834 aa8.78□□□□□ -1
ATRX-220ENST00000635865 PIAS4Q8N2W9 510 aaPredicted RBP8.45□□□□□ -1.06
ATRX-220ENST00000635865 PPP6R1Q9UPN7 881 aa8.27□□□□□ -1.09
ATRX-220ENST00000635865 ADRA2BP18089 450 aa8.18□□□□□ -1.1
ATRX-220ENST00000635865 PLPPR3Q6T4P5 718 aa8.05□□□□□ -1.12
ATRX-220ENST00000635865 CACNB1Q02641 598 aaPredicted RBP7.79□□□□□ -1.16
ATRX-220ENST00000635865 DMRT2Q9Y5R5 561 aa7.72□□□□□ -1.17
ATRX-220ENST00000635865 MAPK8IP2Q13387 824 aaPredicted RBP7.67□□□□□ -1.18
ATRX-220ENST00000635865 RNF39Q9H2S5 420 aa7.48□□□□□ -1.21
ATRX-220ENST00000635865 SCAF1Q9H7N4 1312 aaKnown RBP7.43□□□□□ -1.22
ATRX-220ENST00000635865 DCAF8L1A6NGE4 600 aa7.32□□□□□ -1.24
ATRX-220ENST00000635865 C1QBPQ07021 282 aaKnown RBP7.32□□□□□ -1.24
ATRX-220ENST00000635865 HOXD11P31277 338 aaPredicted RBP7.26□□□□□ -1.25
ATRX-220ENST00000635865 POTEHQ6S545 545 aa7.26□□□□□ -1.25
ATRX-220ENST00000635865 DNAJC5BQ9UF47 199 aa7.13□□□□□ -1.27
ATRX-220ENST00000635865 RNF216Q9NWF9 866 aaPredicted RBP7.06□□□□□ -1.28
ATRX-220ENST00000635865 PPP4R3CPQ6ZMV5 832 aa7□□□□□ -1.29
ATRX-220ENST00000635865 CNKSR2Q8WXI2 1034 aa6.97□□□□□ -1.29
ATRX-220ENST00000635865 DSG3P32926 999 aa6.84□□□□□ -1.31
ATRX-220ENST00000635865 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.83□□□□□ -1.324e-8■□□□□ 8.4
ATRX-220ENST00000635865 SPINK5Q9NQ38 1064 aaPredicted RBP6.74□□□□□ -1.33
ATRX-220ENST00000635865 U3KPZ7 1027 aaPredicted RBP6.71□□□□□ -1.34
ATRX-220ENST00000635865 CAPN15O75808 1086 aa6.69□□□□□ -1.34
ATRX-220ENST00000635865 SP7Q8TDD2 431 aaPredicted RBP6.58□□□□□ -1.36
ATRX-220ENST00000635865 CHRDL2Q6WN34 429 aa6.55□□□□□ -1.36
ATRX-220ENST00000635865 NCBP3Q53F19 620 aaKnown RBP6.54□□□□□ -1.36
ATRX-220ENST00000635865 ABCB7O75027 752 aa6.51□□□□□ -1.37
ATRX-220ENST00000635865 NPM3O75607 178 aaKnown RBP6.51□□□□□ -1.37
ATRX-220ENST00000635865 RBM42Q9BTD8 480 aaKnown RBP6.48□□□□□ -1.37
ATRX-220ENST00000635865 TRHP20396 242 aaPredicted RBP6.47□□□□□ -1.37
ATRX-220ENST00000635865 ZNF219Q9P2Y4 722 aaPredicted RBP6.46□□□□□ -1.38
ATRX-220ENST00000635865 APLP2Q06481 763 aa6.38□□□□□ -1.39
ATRX-220ENST00000635865 SLC4A2P04920 1241 aa6.37□□□□□ -1.39
ATRX-220ENST00000635865 PIP4P2Q8N4L2 257 aa6.31□□□□□ -1.4
ATRX-220ENST00000635865 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.28□□□□□ -1.4
ATRX-220ENST00000635865 HNRNPUL2Q1KMD3 747 aaKnown RBP6.28□□□□□ -1.4
ATRX-220ENST00000635865 HAX1O00165 279 aa6.27□□□□□ -1.41
ATRX-220ENST00000635865 AKT1S1Q96B36 256 aa6.26□□□□□ -1.41
ATRX-220ENST00000635865 EVX2Q03828 476 aa6.25□□□□□ -1.41
ATRX-220ENST00000635865 SAMD1Q6SPF0 538 aaPredicted RBP6.23□□□□□ -1.41
ATRX-220ENST00000635865 FXR2P51116 673 aaKnown RBP eCLIP6.22□□□□□ -1.41
ATRX-220ENST00000635865 POLA2Q14181 598 aa6.22□□□□□ -1.41
ATRX-220ENST00000635865 REM2Q8IYK8 340 aaPredicted RBP6.21□□□□□ -1.42
ATRX-220ENST00000635865 LHX8Q68G74 356 aa6.16□□□□□ -1.42
ATRX-220ENST00000635865 PITPNM1O00562 1244 aa6.15□□□□□ -1.42
ATRX-220ENST00000635865 PLSCR2Q9NRY7 297 aa6.1□□□□□ -1.43
ATRX-220ENST00000635865 EHMT2Q96KQ7 1210 aa6.07□□□□□ -1.44
ATRX-220ENST00000635865 C19orf67A6NJJ6 358 aa6.04□□□□□ -1.44
ATRX-220ENST00000635865 GABBR2O75899 941 aa6.04□□□□□ -1.44
ATRX-220ENST00000635865 OSCARQ8IYS5 282 aa6.04□□□□□ -1.44
ATRX-220ENST00000635865 ZBTB12Q9Y330 459 aaPredicted RBP6.03□□□□□ -1.44
ATRX-220ENST00000635865 MYCNP04198 464 aaPredicted RBP6□□□□□ -1.45
ATRX-220ENST00000635865 POTEIP0CG38 1075 aa5.96□□□□□ -1.46
ATRX-220ENST00000635865 PRKAR2AP13861 404 aaKnown RBP5.96□□□□□ -1.46
ATRX-220ENST00000635865 KCNA4P22459 653 aa5.95□□□□□ -1.46
ATRX-220ENST00000635865 ATF5Q9Y2D1 282 aaPredicted RBP5.95□□□□□ -1.46
ATRX-220ENST00000635865 SPDYE2BA6NHP3 402 aa5.83□□□□□ -1.48
ATRX-220ENST00000635865 SPDYE6P0CI01 402 aa5.83□□□□□ -1.48
ATRX-220ENST00000635865 SPDYE2Q495Y8 402 aa5.83□□□□□ -1.48
ATRX-220ENST00000635865 SPDYE1Q8NFV5 336 aaPredicted RBP5.83□□□□□ -1.48
ATRX-220ENST00000635865 POTEMA6NI47 508 aa5.81□□□□□ -1.48
ATRX-220ENST00000635865 OTUD5Q96G74 571 aa5.81□□□□□ -1.48
ATRX-220ENST00000635865 CLEC11AQ9Y240 323 aa5.8□□□□□ -1.48
ATRX-220ENST00000635865 CHADLQ6NUI6 762 aa5.79□□□□□ -1.48
ATRX-220ENST00000635865 SLC24A1O60721 1099 aa5.78□□□□□ -1.48
ATRX-220ENST00000635865 POTEGQ6S5H5 508 aa5.78□□□□□ -1.48
ATRX-220ENST00000635865 CSRNP3Q8WYN3 585 aa5.78□□□□□ -1.48
ATRX-220ENST00000635865 CLCN6P51797 869 aa5.76□□□□□ -1.49
ATRX-220ENST00000635865 POTEB2H3BUK9 544 aa5.75□□□□□ -1.49
ATRX-220ENST00000635865 PCDH10Q9P2E7 1040 aa5.75□□□□□ -1.49
ATRX-220ENST00000635865 SSUH2Q9Y2M2 353 aa5.74□□□□□ -1.49
ATRX-220ENST00000635865 CD44P16070 742 aaKnown RBP5.73□□□□□ -1.49
ATRX-220ENST00000635865 DCBLD2Q96PD2 775 aa5.72□□□□□ -1.49
ATRX-220ENST00000635865 SLC4A1APQ9BWU0 796 aaKnown RBP5.72□□□□□ -1.49
ATRX-220ENST00000635865 FOXD4L1Q9NU39 408 aa5.68□□□□□ -1.5
ATRX-220ENST00000635865 ZNF579Q8NAF0 562 aaKnown RBP5.67□□□□□ -1.5
ATRX-220ENST00000635865 FARP1Q9Y4F1 1045 aaPredicted RBP5.67□□□□□ -1.5
ATRX-220ENST00000635865 PRR29P0C7W0 189 aa5.66□□□□□ -1.5
ATRX-220ENST00000635865 FBLN2P98095 1184 aa5.66□□□□□ -1.5
ATRX-220ENST00000635865 MKRN4PQ13434 485 aaPredicted RBP5.66□□□□□ -1.5
ATRX-220ENST00000635865 LCE2DQ5TA82 110 aaPredicted RBP5.66□□□□□ -1.5
ATRX-220ENST00000635865 ZNF692Q9BU19 519 aaPredicted RBP5.66□□□□□ -1.5
ATRX-220ENST00000635865 GALR2O43603 387 aaPredicted RBP5.62□□□□□ -1.51
ATRX-220ENST00000635865 POTEJP0CG39 1038 aa5.6□□□□□ -1.51
ATRX-220ENST00000635865 PELP1Q8IZL8 1130 aaKnown RBP5.59□□□□□ -1.51
ATRX-220ENST00000635865 ATXN8OSP0DMR3 200 aa5.57□□□□□ -1.52
ATRX-220ENST00000635865 AMER1Q5JTC6 1135 aaPredicted RBP5.57□□□□□ -1.52
ATRX-220ENST00000635865 PABPN1Q86U42 306 aaKnown RBP eCLIP5.57□□□□□ -1.52
ATRX-220ENST00000635865 ZRANB1Q9UGI0 708 aa5.57□□□□□ -1.52
ATRX-220ENST00000635865 RTN4Q9NQC3 1192 aaKnown RBP5.54□□□□□ -1.52
ATRX-220ENST00000635865 FAM163AQ96GL9 167 aaPredicted RBP5.51□□□□□ -1.53
ATRX-220ENST00000635865 ZBTB22O15209 634 aa5.5□□□□□ -1.53
ATRX-220ENST00000635865 METRNQ9UJH8 293 aa5.5□□□□□ -1.53
ATRX-220ENST00000635865 MAMSTRQ6ZN01 415 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms