RNA–Protein interactions for RNA: ENST00000635727.1

CACNA1A-215, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-215ENST00000635727 APCP25054 2843 aa9.42□□□□□ -0.9
CACNA1A-215ENST00000635727 TRANK1O15050 2925 aa9.42□□□□□ -0.9
CACNA1A-215ENST00000635727 Q6ZRN7 208 aaPredicted RBP9.41□□□□□ -0.9
CACNA1A-215ENST00000635727 DMXL2Q8TDJ6 3036 aa9.4□□□□□ -0.9
CACNA1A-215ENST00000635727 KRTAP7-1Q8IUC3 87 aa9.37□□□□□ -0.91
CACNA1A-215ENST00000635727 USP34Q70CQ2 3546 aa9.36□□□□□ -0.91
CACNA1A-215ENST00000635727 SPTBN5Q9NRC6 3674 aaKnown RBP9.36□□□□□ -0.91
CACNA1A-215ENST00000635727 RPS29P62273 56 aaKnown RBP9.35□□□□□ -0.91
CACNA1A-215ENST00000635727 LRBAP50851 2863 aa9.34□□□□□ -0.91
CACNA1A-215ENST00000635727 ATMQ13315 3056 aa9.32□□□□□ -0.92
CACNA1A-215ENST00000635727 NSD1Q96L73 2696 aaPredicted RBP9.31□□□□□ -0.92
CACNA1A-215ENST00000635727 COL12A1Q99715 3063 aa9.3□□□□□ -0.92
CACNA1A-215ENST00000635727 ZNF292O60281 2723 aa9.3□□□□□ -0.92
CACNA1A-215ENST00000635727 PRO2289Q9P1D8 64 aa9.28□□□□□ -0.92
CACNA1A-215ENST00000635727 CHD9Q3L8U1 2897 aa9.26□□□□□ -0.93
CACNA1A-215ENST00000635727 DCHS1Q96JQ0 3298 aa9.25□□□□□ -0.93
CACNA1A-215ENST00000635727 WDFY3Q8IZQ1 3526 aa9.24□□□□□ -0.93
CACNA1A-215ENST00000635727 XP32Q5T750 250 aa9.23□□□□□ -0.93
CACNA1A-215ENST00000635727 FRYLO94915 3013 aa9.23□□□□□ -0.93
CACNA1A-215ENST00000635727 LOC400499M0QZD8 3231 aa9.19□□□□□ -0.94
CACNA1A-215ENST00000635727 BOD1L1Q8NFC6 3051 aa9.18□□□□□ -0.94
CACNA1A-215ENST00000635727 PP632Q6XCG6 107 aa9.18□□□□□ -0.94
CACNA1A-215ENST00000635727 H0YAA0 97 aa9.15□□□□□ -0.94
CACNA1A-215ENST00000635727 IGSF10Q6WRI0 2623 aa9.13□□□□□ -0.95
CACNA1A-215ENST00000635727 UBR5O95071 2799 aaPredicted RBP9.11□□□□□ -0.95
CACNA1A-215ENST00000635727 KRTAP13-1Q8IUC0 172 aa9.1□□□□□ -0.95
CACNA1A-215ENST00000635727 ZFHX4Q86UP3 3567 aa9.09□□□□□ -0.95
CACNA1A-215ENST00000635727 ZZEF1O43149 2961 aa9.09□□□□□ -0.95
CACNA1A-215ENST00000635727 UTP20O75691 2785 aaKnown RBP9.06□□□□□ -0.96
CACNA1A-215ENST00000635727 ADGRG4Q8IZF6 3080 aa9.04□□□□□ -0.96
CACNA1A-215ENST00000635727 HIVEP1P15822 2718 aa9.04□□□□□ -0.96
CACNA1A-215ENST00000635727 NBPF19A0A087WUL8 3843 aa9.01□□□□□ -0.97
CACNA1A-215ENST00000635727 EYSQ5T1H1 3165 aa8.98□□□□□ -0.97
CACNA1A-215ENST00000635727 CRCT1Q9UGL9 99 aa8.96□□□□□ -0.97
CACNA1A-215ENST00000635727 LAMA5O15230 3695 aa8.96□□□□□ -0.98
CACNA1A-215ENST00000635727 TACC2O95359 2948 aa8.93□□□□□ -0.98
CACNA1A-215ENST00000635727 KRTAP12-2P59991 146 aa8.93□□□□□ -0.98
CACNA1A-215ENST00000635727 TNRC18O15417 2968 aaPredicted RBP8.92□□□□□ -0.98
CACNA1A-215ENST00000635727 ITPR1Q14643 2758 aa8.89□□□□□ -0.99
CACNA1A-215ENST00000635727 NBEAQ8NFP9 2946 aa8.86□□□□□ -0.99
CACNA1A-215ENST00000635727 CSMD1Q96PZ7 3565 aa8.85□□□□□ -0.99
CACNA1A-215ENST00000635727 TPRXLQ17RH7 258 aa8.83□□□□□ -1
CACNA1A-215ENST00000635727 KRTAP1-4P0C5Y4 121 aa8.82□□□□□ -1
CACNA1A-215ENST00000635727 DMXL1Q9Y485 3027 aa8.81□□□□□ -1
CACNA1A-215ENST00000635727 CELSR2Q9HCU4 2923 aa8.79□□□□□ -1
CACNA1A-215ENST00000635727 CELSR1Q9NYQ6 3014 aa8.78□□□□□ -1
CACNA1A-215ENST00000635727 RELNP78509 3460 aa8.74□□□□□ -1.01
CACNA1A-215ENST00000635727 KRTAP15-1Q3LI76 137 aa8.72□□□□□ -1.01
CACNA1A-215ENST00000635727 KRTAP13-3Q3SY46 172 aa8.69□□□□□ -1.02
CACNA1A-215ENST00000635727 TENM1Q9UKZ4 2725 aa8.63□□□□□ -1.03
CACNA1A-215ENST00000635727 DCHS2Q6V1P9 2916 aa8.57□□□□□ -1.04
CACNA1A-215ENST00000635727 FLNCQ14315 2725 aa8.54□□□□□ -1.04
CACNA1A-215ENST00000635727 SPENQ96T58 3664 aaKnown RBP8.53□□□□□ -1.04
CACNA1A-215ENST00000635727 SMG1Q96Q15 3661 aaKnown RBP8.51□□□□□ -1.05
CACNA1A-215ENST00000635727 KRTAP21-3Q3LHN1 58 aa8.5□□□□□ -1.05
CACNA1A-215ENST00000635727 NF1P21359 2839 aa8.47□□□□□ -1.05
CACNA1A-215ENST00000635727 TGP01266 2768 aa8.46□□□□□ -1.06
CACNA1A-215ENST00000635727 KRTAP13-4Q3LI77 160 aa8.46□□□□□ -1.06
CACNA1A-215ENST00000635727 FBN2P35556 2912 aa8.43□□□□□ -1.06
CACNA1A-215ENST00000635727 TENM4Q6N022 2769 aa8.41□□□□□ -1.06
CACNA1A-215ENST00000635727 NIPBLQ6KC79 2804 aaeCLIP8.38□□□□□ -1.07
CACNA1A-215ENST00000635727 TENM3Q9P273 2699 aa8.37□□□□□ -1.07
CACNA1A-215ENST00000635727 CUBNO60494 3623 aa8.35□□□□□ -1.07
CACNA1A-215ENST00000635727 KRTAP12-1P59990 96 aa8.35□□□□□ -1.07
CACNA1A-215ENST00000635727 ZANQ9Y493 2812 aa8.33□□□□□ -1.08
CACNA1A-215ENST00000635727 TENM2Q9NT68 2774 aa8.32□□□□□ -1.08
CACNA1A-215ENST00000635727 DMDP11532 3685 aa8.32□□□□□ -1.08
CACNA1A-215ENST00000635727 VWFP04275 2813 aa8.3□□□□□ -1.08
CACNA1A-215ENST00000635727 PDZD2O15018 2839 aa8.26□□□□□ -1.09
CACNA1A-215ENST00000635727 PKD1L1Q8TDX9 2849 aa8.23□□□□□ -1.09
CACNA1A-215ENST00000635727 ZFHX3Q15911 3703 aa8.22□□□□□ -1.09
CACNA1A-215ENST00000635727 HRNRQ86YZ3 2850 aaPredicted RBP8.21□□□□□ -1.1
CACNA1A-215ENST00000635727 SVEP1Q4LDE5 3571 aa8.2□□□□□ -1.1
CACNA1A-215ENST00000635727 MUC3AQ02505 3323 aa8.1□□□□□ -1.11
CACNA1A-215ENST00000635727 MXRA5Q9NR99 2828 aa8.08□□□□□ -1.12
CACNA1A-215ENST00000635727 KRTAP10-12P60413 245 aa8□□□□□ -1.13
CACNA1A-215ENST00000635727 KRTAP3-1Q9BYR8 98 aa7.95□□□□□ -1.14
CACNA1A-215ENST00000635727 CSMD3Q7Z407 3707 aa7.95□□□□□ -1.14
CACNA1A-215ENST00000635727 KRTAP10-5P60370 271 aa7.93□□□□□ -1.14
CACNA1A-215ENST00000635727 CSMD2Q7Z408 3487 aa7.88□□□□□ -1.15
CACNA1A-215ENST00000635727 LORP23490 312 aaPredicted RBP7.84□□□□□ -1.15
CACNA1A-215ENST00000635727 KRTAP10-6P60371 365 aaPredicted RBP7.83□□□□□ -1.16
CACNA1A-215ENST00000635727 MEGF8Q7Z7M0 2845 aa7.83□□□□□ -1.16
CACNA1A-215ENST00000635727 VPS13CQ709C8 3753 aa7.82□□□□□ -1.16
CACNA1A-215ENST00000635727 INE1O15225 51 aa7.8□□□□□ -1.16
CACNA1A-215ENST00000635727 SRRM2Q9UQ35 2752 aaKnown RBP7.79□□□□□ -1.16
CACNA1A-215ENST00000635727 COL7A1Q02388 2944 aa7.74□□□□□ -1.17
CACNA1A-215ENST00000635727 TRRAPQ9Y4A5 3859 aa7.71□□□□□ -1.17
CACNA1A-215ENST00000635727 LCE3AQ5TA76 89 aa7.71□□□□□ -1.18
CACNA1A-215ENST00000635727 KRTAP12-3P60328 96 aa7.68□□□□□ -1.18
CACNA1A-215ENST00000635727 BSNQ9UPA5 3926 aa7.65□□□□□ -1.19
CACNA1A-215ENST00000635727 KRTAP4-5Q9BYR2 181 aa7.6□□□□□ -1.19
CACNA1A-215ENST00000635727 KRTAP8-1Q8IUC2 63 aa7.58□□□□□ -1.2
CACNA1A-215ENST00000635727 FBN1P35555 2871 aaKnown RBP7.55□□□□□ -1.2
CACNA1A-215ENST00000635727 FBN3Q75N90 2809 aa7.51□□□□□ -1.21
CACNA1A-215ENST00000635727 AKAP9Q99996 3911 aa7.38□□□□□ -1.23
CACNA1A-215ENST00000635727 ANK3Q12955 4377 aaKnown RBP7.38□□□□□ -1.23
CACNA1A-215ENST00000635727 KRTAP3-3Q9BYR6 98 aa7.36□□□□□ -1.23
CACNA1A-215ENST00000635727 OTOGQ6ZRI0 2925 aa7.36□□□□□ -1.23
CACNA1A-215ENST00000635727 HUWE1Q7Z6Z7 4374 aaKnown RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms