RNA–Protein interactions for RNA: ENST00000632629.1

NPHP3-ACAD11-202, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2

Gene NPHP3-ACAD11, Length 695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-202ENST00000632629 ANKRD50Q9ULJ7 1429 aa0.13□□□□□ -2.39
NPHP3-ACAD11-202ENST00000632629 EFCAB5A4FU69 1503 aa0.13□□□□□ -2.39
NPHP3-ACAD11-202ENST00000632629 CLASP1Q7Z460 1538 aa0.13□□□□□ -2.39
NPHP3-ACAD11-202ENST00000632629 DEPDC5O75140 1603 aa0.13□□□□□ -2.39
NPHP3-ACAD11-202ENST00000632629 ZZEF1O43149 2961 aa0.13□□□□□ -2.39
NPHP3-ACAD11-202ENST00000632629 LRP2P98164 4655 aa0.13□□□□□ -2.39
NPHP3-ACAD11-202ENST00000632629 COX6B1P14854 86 aa0.13□□□□□ -2.39
NPHP3-ACAD11-202ENST00000632629 SMIM11AP58511 58 aa0.13□□□□□ -2.39
NPHP3-ACAD11-202ENST00000632629 C18orf32Q8TCD1 76 aa0.13□□□□□ -2.39
NPHP3-ACAD11-202ENST00000632629 MAST1Q9Y2H9 1570 aa0.13□□□□□ -2.39
NPHP3-ACAD11-202ENST00000632629 ITSN2Q9NZM3 1697 aa0.13□□□□□ -2.39
NPHP3-ACAD11-202ENST00000632629 PKDREJQ9NTG1 2253 aa0.13□□□□□ -2.39
NPHP3-ACAD11-202ENST00000632629 ANK3Q12955 4377 aaKnown RBP0.13□□□□□ -2.39
NPHP3-ACAD11-202ENST00000632629 ABCC6O95255 1503 aa0.13□□□□□ -2.39
NPHP3-ACAD11-202ENST00000632629 ERICH3Q5RHP9 1530 aa0.13□□□□□ -2.39
NPHP3-ACAD11-202ENST00000632629 DNAH11Q96DT5 4516 aa0.12□□□□□ -2.39
NPHP3-ACAD11-202ENST00000632629 DNAH7Q8WXX0 4024 aa0.12□□□□□ -2.39
NPHP3-ACAD11-202ENST00000632629 FXYD6-FXYD2A0A087WZ82 144 aa0.12□□□□□ -2.39
NPHP3-ACAD11-202ENST00000632629 A0A1B0GUT8 65 aa0.12□□□□□ -2.39
NPHP3-ACAD11-202ENST00000632629 CEBPZOSA8MTT3 80 aa0.12□□□□□ -2.39
NPHP3-ACAD11-202ENST00000632629 SPRR1BP22528 89 aa0.12□□□□□ -2.39
NPHP3-ACAD11-202ENST00000632629 COX7BP24311 80 aa0.12□□□□□ -2.39
NPHP3-ACAD11-202ENST00000632629 MT4P47944 62 aa0.12□□□□□ -2.39
NPHP3-ACAD11-202ENST00000632629 PIGYQ3MUY2 71 aa0.12□□□□□ -2.39
NPHP3-ACAD11-202ENST00000632629 ATP5EP2Q5VTU8 51 aa0.12□□□□□ -2.39
NPHP3-ACAD11-202ENST00000632629 S100A13Q99584 98 aa0.12□□□□□ -2.39
NPHP3-ACAD11-202ENST00000632629 UTRNP46939 3433 aa0.12□□□□□ -2.39
NPHP3-ACAD11-202ENST00000632629 LRP1BQ9NZR2 4599 aa0.12□□□□□ -2.39
NPHP3-ACAD11-202ENST00000632629 MUC12Q9UKN1 5478 aa0.11□□□□□ -2.39
NPHP3-ACAD11-202ENST00000632629 CSMD2Q7Z408 3487 aa0.11□□□□□ -2.39
NPHP3-ACAD11-202ENST00000632629 VPS13DQ5THJ4 4388 aa0.11□□□□□ -2.39
NPHP3-ACAD11-202ENST00000632629 XIRP2A4UGR9 3374 aa0.11□□□□□ -2.39
NPHP3-ACAD11-202ENST00000632629 TOGARAM1Q9Y4F4 1720 aa0.11□□□□□ -2.39
NPHP3-ACAD11-202ENST00000632629 TRAV21A0A0B4J279 112 aa0.11□□□□□ -2.39
NPHP3-ACAD11-202ENST00000632629 KANTRA0A1W2PQU2 76 aa0.11□□□□□ -2.39
NPHP3-ACAD11-202ENST00000632629 CPSF4LA6NMK7 179 aaKnown RBP0.11□□□□□ -2.39
NPHP3-ACAD11-202ENST00000632629 H3BUT2 72 aa0.11□□□□□ -2.39
NPHP3-ACAD11-202ENST00000632629 DEFB112Q30KQ8 113 aa0.11□□□□□ -2.39
NPHP3-ACAD11-202ENST00000632629 SPINK6Q6UWN8 80 aa0.11□□□□□ -2.39
NPHP3-ACAD11-202ENST00000632629 CUBNO60494 3623 aa0.11□□□□□ -2.39
NPHP3-ACAD11-202ENST00000632629 ALS2Q96Q42 1657 aa0.11□□□□□ -2.39
NPHP3-ACAD11-202ENST00000632629 CDH23Q9H251 3354 aa0.11□□□□□ -2.39
NPHP3-ACAD11-202ENST00000632629 DNAH2Q9P225 4427 aa0.1□□□□□ -2.39
NPHP3-ACAD11-202ENST00000632629 PREX2Q70Z35 1606 aa0.1□□□□□ -2.39
NPHP3-ACAD11-202ENST00000632629 DUOX2Q9NRD8 1548 aa0.1□□□□□ -2.39
NPHP3-ACAD11-202ENST00000632629 DNAH1Q9P2D7 4330 aa0.1□□□□□ -2.39
NPHP3-ACAD11-202ENST00000632629 CFDP00746 253 aaPredicted RBP0.1□□□□□ -2.39
NPHP3-ACAD11-202ENST00000632629 SPRR2EP22531 72 aa0.1□□□□□ -2.39
NPHP3-ACAD11-202ENST00000632629 SPRR2DP22532 72 aa0.1□□□□□ -2.39
NPHP3-ACAD11-202ENST00000632629 SPRR2BP35325 72 aa0.1□□□□□ -2.39
NPHP3-ACAD11-202ENST00000632629 SPRR2AP35326 72 aa0.1□□□□□ -2.39
NPHP3-ACAD11-202ENST00000632629 GNGT1P63211 74 aa0.1□□□□□ -2.39
NPHP3-ACAD11-202ENST00000632629 ADIRFQ15847 76 aa0.1□□□□□ -2.39
NPHP3-ACAD11-202ENST00000632629 Q5BKY6 102 aa0.1□□□□□ -2.39
NPHP3-ACAD11-202ENST00000632629 MRPL34Q9BQ48 92 aaKnown RBP0.1□□□□□ -2.39
NPHP3-ACAD11-202ENST00000632629 CRIPTQ9P021 101 aa0.1□□□□□ -2.39
NPHP3-ACAD11-202ENST00000632629 LAMA5O15230 3695 aa0.1□□□□□ -2.39
NPHP3-ACAD11-202ENST00000632629 MROH2AA6NES4 1674 aa0.09□□□□□ -2.39
NPHP3-ACAD11-202ENST00000632629 WDFY3Q8IZQ1 3526 aa0.09□□□□□ -2.39
NPHP3-ACAD11-202ENST00000632629 PRM1P04553 51 aa0.09□□□□□ -2.4
NPHP3-ACAD11-202ENST00000632629 IFI6P09912 130 aa0.09□□□□□ -2.4
NPHP3-ACAD11-202ENST00000632629 S100A3P33764 101 aa0.09□□□□□ -2.4
NPHP3-ACAD11-202ENST00000632629 USMG5Q96IX5 58 aa0.09□□□□□ -2.4
NPHP3-ACAD11-202ENST00000632629 DNAH14Q0VDD8 3507 aa0.09□□□□□ -2.4
NPHP3-ACAD11-202ENST00000632629 EFCAB6Q5THR3 1501 aa0.08□□□□□ -2.4
NPHP3-ACAD11-202ENST00000632629 DEFB105AQ8NG35 78 aa0.08□□□□□ -2.4
NPHP3-ACAD11-202ENST00000632629 MYO15AQ9UKN7 3530 aa0.08□□□□□ -2.4
NPHP3-ACAD11-202ENST00000632629 KIF21BO75037 1637 aa0.08□□□□□ -2.4
NPHP3-ACAD11-202ENST00000632629 SPENQ96T58 3664 aaKnown RBP0.08□□□□□ -2.4
NPHP3-ACAD11-202ENST00000632629 CROCC2H7BZ55 1655 aa0.08□□□□□ -2.4
NPHP3-ACAD11-202ENST00000632629 SPTY2D1-AS1A0A0U1RR47 76 aa0.07□□□□□ -2.4
NPHP3-ACAD11-202ENST00000632629 H0YAA0 97 aa0.07□□□□□ -2.4
NPHP3-ACAD11-202ENST00000632629 NDUFB1O75438 58 aa0.07□□□□□ -2.4
NPHP3-ACAD11-202ENST00000632629 IFI27P40305 119 aaPredicted RBP0.07□□□□□ -2.4
NPHP3-ACAD11-202ENST00000632629 NREPQ16612 68 aa0.07□□□□□ -2.4
NPHP3-ACAD11-202ENST00000632629 H1FX-AS1Q4G0G2 97 aa0.07□□□□□ -2.4
NPHP3-ACAD11-202ENST00000632629 COX6B2Q6YFQ2 88 aa0.07□□□□□ -2.4
NPHP3-ACAD11-202ENST00000632629 GAFA1Q96PS6 74 aa0.07□□□□□ -2.4
NPHP3-ACAD11-202ENST00000632629 KIAA0586Q9BVV6 1533 aa0.07□□□□□ -2.4
NPHP3-ACAD11-202ENST00000632629 NRXN3Q9Y4C0 1643 aa0.06□□□□□ -2.4
NPHP3-ACAD11-202ENST00000632629 DNAH8Q96JB1 4490 aa0.06□□□□□ -2.4
NPHP3-ACAD11-202ENST00000632629 DYNC2H1Q8NCM8 4307 aaKnown RBP0.06□□□□□ -2.4
NPHP3-ACAD11-202ENST00000632629 CCL22O00626 93 aa0.06□□□□□ -2.4
NPHP3-ACAD11-202ENST00000632629 SMIM13P0DJ93 91 aa0.06□□□□□ -2.4
NPHP3-ACAD11-202ENST00000632629 DEFB109BQ30KR1 87 aa0.06□□□□□ -2.4
NPHP3-ACAD11-202ENST00000632629 HEPN1Q6WQI6 88 aa0.06□□□□□ -2.4
NPHP3-ACAD11-202ENST00000632629 CDC42BPAQ5VT25 1732 aa0.06□□□□□ -2.4
NPHP3-ACAD11-202ENST00000632629 ABCA10Q8WWZ4 1543 aa0.06□□□□□ -2.4
NPHP3-ACAD11-202ENST00000632629 COX8AP10176 69 aa0.05□□□□□ -2.4
NPHP3-ACAD11-202ENST00000632629 KLK9Q2XQG4 91 aa0.05□□□□□ -2.4
NPHP3-ACAD11-202ENST00000632629 KCNQ1DNQ9H478 68 aa0.05□□□□□ -2.4
NPHP3-ACAD11-202ENST00000632629 SMCO4Q9NRQ5 59 aa0.05□□□□□ -2.4
NPHP3-ACAD11-202ENST00000632629 SMG1Q96Q15 3661 aaKnown RBP0.05□□□□□ -2.4
NPHP3-ACAD11-202ENST00000632629 HFM1A2PYH4 1435 aa0.04□□□□□ -2.4
NPHP3-ACAD11-202ENST00000632629 UGGT1Q9NYU2 1555 aa0.04□□□□□ -2.4
NPHP3-ACAD11-202ENST00000632629 UMAD1C9J7I0 102 aa0.04□□□□□ -2.4
NPHP3-ACAD11-202ENST00000632629 I3L3M4 83 aa0.04□□□□□ -2.4
NPHP3-ACAD11-202ENST00000632629 NDUFA4O00483 81 aa0.04□□□□□ -2.4
NPHP3-ACAD11-202ENST00000632629 WFDC9Q8NEX5 89 aa0.04□□□□□ -2.4
NPHP3-ACAD11-202ENST00000632629 PRO3102Q9H379 93 aa0.04□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms