RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 Q6ZRN7 208 aaPredicted RBP6.62□□□□□ -1.35
SHPRH-211ENST00000629427 UTP20O75691 2785 aaKnown RBP6.61□□□□□ -1.35
SHPRH-211ENST00000629427 KRTAP13-2Q52LG2 175 aa6.57□□□□□ -1.36
SHPRH-211ENST00000629427 COL12A1Q99715 3063 aa6.57□□□□□ -1.36
SHPRH-211ENST00000629427 ADGRG4Q8IZF6 3080 aa6.55□□□□□ -1.36
SHPRH-211ENST00000629427 TACC2O95359 2948 aa6.54□□□□□ -1.36
SHPRH-211ENST00000629427 KRTAP25-1Q3LHN0 102 aa6.53□□□□□ -1.36
SHPRH-211ENST00000629427 KRTAP7-1Q8IUC3 87 aa6.53□□□□□ -1.36
SHPRH-211ENST00000629427 TNP1P09430 55 aa6.53□□□□□ -1.36
SHPRH-211ENST00000629427 ITPR1Q14643 2758 aa6.51□□□□□ -1.37
SHPRH-211ENST00000629427 ATMQ13315 3056 aa6.51□□□□□ -1.37
SHPRH-211ENST00000629427 KRTAP16-1A8MUX0 517 aa6.5□□□□□ -1.37
SHPRH-211ENST00000629427 SPTBN5Q9NRC6 3674 aaKnown RBP6.49□□□□□ -1.37
SHPRH-211ENST00000629427 HIVEP1P15822 2718 aa6.48□□□□□ -1.37
SHPRH-211ENST00000629427 EYSQ5T1H1 3165 aa6.48□□□□□ -1.37
SHPRH-211ENST00000629427 KRTAP13-1Q8IUC0 172 aa6.47□□□□□ -1.37
SHPRH-211ENST00000629427 NBEAQ8NFP9 2946 aa6.44□□□□□ -1.38
SHPRH-211ENST00000629427 C10orf95Q9H7T3 257 aa6.44□□□□□ -1.38
SHPRH-211ENST00000629427 ZZEF1O43149 2961 aa6.43□□□□□ -1.38
SHPRH-211ENST00000629427 CELSR2Q9HCU4 2923 aa6.42□□□□□ -1.38
SHPRH-211ENST00000629427 KRTAP10-8P60410 259 aa6.41□□□□□ -1.38
SHPRH-211ENST00000629427 A0A1B0GVY2 172 aa6.41□□□□□ -1.38
SHPRH-211ENST00000629427 A6NN06 94 aa6.4□□□□□ -1.38
SHPRH-211ENST00000629427 KRTAP21-3Q3LHN1 58 aa6.4□□□□□ -1.39
SHPRH-211ENST00000629427 NDUFAF8A1L188 74 aa6.38□□□□□ -1.39
SHPRH-211ENST00000629427 TNRC18O15417 2968 aaPredicted RBP6.38□□□□□ -1.39
SHPRH-211ENST00000629427 WDFY3Q8IZQ1 3526 aa6.34□□□□□ -1.39
SHPRH-211ENST00000629427 DMXL1Q9Y485 3027 aa6.33□□□□□ -1.4
SHPRH-211ENST00000629427 MYO15AQ9UKN7 3530 aa6.32□□□□□ -1.4
SHPRH-211ENST00000629427 ASPMQ8IZT6 3477 aa6.3□□□□□ -1.4
SHPRH-211ENST00000629427 XP32Q5T750 250 aa6.29□□□□□ -1.4
SHPRH-211ENST00000629427 LOC400499M0QZD8 3231 aa6.29□□□□□ -1.4
SHPRH-211ENST00000629427 FLNCQ14315 2725 aa6.28□□□□□ -1.4
SHPRH-211ENST00000629427 DCHS2Q6V1P9 2916 aa6.28□□□□□ -1.4
SHPRH-211ENST00000629427 TENM1Q9UKZ4 2725 aa6.28□□□□□ -1.4
SHPRH-211ENST00000629427 CELSR1Q9NYQ6 3014 aa6.27□□□□□ -1.41
SHPRH-211ENST00000629427 KRTAP10-10P60014 251 aa6.26□□□□□ -1.41
SHPRH-211ENST00000629427 NBPF19A0A087WUL8 3843 aa6.25□□□□□ -1.41
SHPRH-211ENST00000629427 DCHS1Q96JQ0 3298 aa6.23□□□□□ -1.41
SHPRH-211ENST00000629427 PP632Q6XCG6 107 aa6.22□□□□□ -1.41
SHPRH-211ENST00000629427 TENM4Q6N022 2769 aa6.22□□□□□ -1.41
SHPRH-211ENST00000629427 KRTAP1-4P0C5Y4 121 aa6.19□□□□□ -1.42
SHPRH-211ENST00000629427 PRO2289Q9P1D8 64 aa6.19□□□□□ -1.42
SHPRH-211ENST00000629427 TPRXLQ17RH7 258 aa6.19□□□□□ -1.42
SHPRH-211ENST00000629427 NF1P21359 2839 aa6.15□□□□□ -1.42
SHPRH-211ENST00000629427 FBN2P35556 2912 aa6.15□□□□□ -1.42
SHPRH-211ENST00000629427 ZANQ9Y493 2812 aa6.12□□□□□ -1.43
SHPRH-211ENST00000629427 H0YAA0 97 aa6.11□□□□□ -1.43
SHPRH-211ENST00000629427 ZFHX4Q86UP3 3567 aa6.11□□□□□ -1.43
SHPRH-211ENST00000629427 LAMA5O15230 3695 aa6.11□□□□□ -1.43
SHPRH-211ENST00000629427 NIPBLQ6KC79 2804 aaeCLIP6.1□□□□□ -1.43
SHPRH-211ENST00000629427 HRNRQ86YZ3 2850 aaPredicted RBP6.05□□□□□ -1.44
SHPRH-211ENST00000629427 KRTAP13-3Q3SY46 172 aa6.04□□□□□ -1.44
SHPRH-211ENST00000629427 CSMD1Q96PZ7 3565 aa6.03□□□□□ -1.44
SHPRH-211ENST00000629427 RELNP78509 3460 aa6.03□□□□□ -1.44
SHPRH-211ENST00000629427 P0C880 135 aa6.03□□□□□ -1.44
SHPRH-211ENST00000629427 TGP01266 2768 aa6□□□□□ -1.45
SHPRH-211ENST00000629427 TENM2Q9NT68 2774 aa5.97□□□□□ -1.45
SHPRH-211ENST00000629427 TENM3Q9P273 2699 aa5.97□□□□□ -1.45
SHPRH-211ENST00000629427 PKD1L1Q8TDX9 2849 aa5.96□□□□□ -1.46
SHPRH-211ENST00000629427 PDZD2O15018 2839 aa5.92□□□□□ -1.46
SHPRH-211ENST00000629427 VWFP04275 2813 aa5.91□□□□□ -1.46
SHPRH-211ENST00000629427 MXRA5Q9NR99 2828 aa5.88□□□□□ -1.47
SHPRH-211ENST00000629427 ZFHX3Q15911 3703 aa5.86□□□□□ -1.47
SHPRH-211ENST00000629427 SPENQ96T58 3664 aaKnown RBP5.81□□□□□ -1.48
SHPRH-211ENST00000629427 KRTAP12-2P59991 146 aa5.8□□□□□ -1.48
SHPRH-211ENST00000629427 SMG1Q96Q15 3661 aaKnown RBP5.76□□□□□ -1.49
SHPRH-211ENST00000629427 DMDP11532 3685 aa5.74□□□□□ -1.49
SHPRH-211ENST00000629427 KRTAP13-4Q3LI77 160 aa5.71□□□□□ -1.5
SHPRH-211ENST00000629427 CUBNO60494 3623 aa5.67□□□□□ -1.5
SHPRH-211ENST00000629427 SVEP1Q4LDE5 3571 aa5.67□□□□□ -1.5
SHPRH-211ENST00000629427 KRTAP12-1P59990 96 aa5.65□□□□□ -1.51
SHPRH-211ENST00000629427 KRTAP15-1Q3LI76 137 aa5.63□□□□□ -1.51
SHPRH-211ENST00000629427 COL7A1Q02388 2944 aa5.6□□□□□ -1.51
SHPRH-211ENST00000629427 CSMD2Q7Z408 3487 aa5.55□□□□□ -1.52
SHPRH-211ENST00000629427 MEGF8Q7Z7M0 2845 aa5.55□□□□□ -1.52
SHPRH-211ENST00000629427 TRRAPQ9Y4A5 3859 aa5.54□□□□□ -1.52
SHPRH-211ENST00000629427 MUC3AQ02505 3323 aa5.53□□□□□ -1.52
SHPRH-211ENST00000629427 FBN1P35555 2871 aaKnown RBP5.52□□□□□ -1.53
SHPRH-211ENST00000629427 FBN3Q75N90 2809 aa5.51□□□□□ -1.53
SHPRH-211ENST00000629427 KRTAP3-1Q9BYR8 98 aa5.5□□□□□ -1.53
SHPRH-211ENST00000629427 SRRM2Q9UQ35 2752 aaKnown RBP5.49□□□□□ -1.53
SHPRH-211ENST00000629427 BSNQ9UPA5 3926 aa5.47□□□□□ -1.53
SHPRH-211ENST00000629427 VPS13CQ709C8 3753 aa5.47□□□□□ -1.53
SHPRH-211ENST00000629427 CRCT1Q9UGL9 99 aa5.44□□□□□ -1.54
SHPRH-211ENST00000629427 ANK3Q12955 4377 aaKnown RBP5.4□□□□□ -1.54
SHPRH-211ENST00000629427 KRTAP10-6P60371 365 aaPredicted RBP5.35□□□□□ -1.55
SHPRH-211ENST00000629427 KRTAP10-12P60413 245 aa5.33□□□□□ -1.56
SHPRH-211ENST00000629427 CSMD3Q7Z407 3707 aa5.32□□□□□ -1.56
SHPRH-211ENST00000629427 OTOGQ6ZRI0 2925 aa5.29□□□□□ -1.56
SHPRH-211ENST00000629427 MT1HL1P0DM35 61 aa5.27□□□□□ -1.57
SHPRH-211ENST00000629427 HUWE1Q7Z6Z7 4374 aaKnown RBP5.24□□□□□ -1.57
SHPRH-211ENST00000629427 KRTAP4-5Q9BYR2 181 aa5.2□□□□□ -1.58
SHPRH-211ENST00000629427 AKAP9Q99996 3911 aa5.19□□□□□ -1.58
SHPRH-211ENST00000629427 INE1O15225 51 aa5.17□□□□□ -1.58
SHPRH-211ENST00000629427 KRTAP3-3Q9BYR6 98 aa5.16□□□□□ -1.58
SHPRH-211ENST00000629427 KRTAP12-3P60328 96 aa5.13□□□□□ -1.59
SHPRH-211ENST00000629427 KRTAP3-2Q9BYR7 98 aa5.12□□□□□ -1.59
SHPRH-211ENST00000629427 ALMS1Q8TCU4 4167 aa5.1□□□□□ -1.59
SHPRH-211ENST00000629427 ZNF469Q96JG9 3925 aaPredicted RBP5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms