RNA–Protein interactions for RNA: ENST00000627049.2

FARP1-242, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5 BASIC

Gene FARP1, Length 5,103 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-242ENST00000627049 ZFHX4Q86UP3 3567 aa10.39□□□□□ -0.75
FARP1-242ENST00000627049 ITPR2Q14571 2701 aa10.38□□□□□ -0.75
FARP1-242ENST00000627049 ASPMQ8IZT6 3477 aa10.37□□□□□ -0.75
FARP1-242ENST00000627049 STAB2Q8WWQ8 2551 aa10.36□□□□□ -0.75
FARP1-242ENST00000627049 DCHS2Q6V1P9 2916 aa10.31□□□□□ -0.76
FARP1-242ENST00000627049 RELNP78509 3460 aa10.31□□□□□ -0.76
FARP1-242ENST00000627049 KRTAP13-1Q8IUC0 172 aa10.3□□□□□ -0.76
FARP1-242ENST00000627049 ADM2Q7Z4H4 148 aa10.3□□□□□ -0.76
FARP1-242ENST00000627049 MXRA5Q9NR99 2828 aa10.29□□□□□ -0.76
FARP1-242ENST00000627049 CRYBG3Q68DQ2 2970 aa10.26□□□□□ -0.77
FARP1-242ENST00000627049 DMDP11532 3685 aa10.24□□□□□ -0.77
FARP1-242ENST00000627049 LAMA5O15230 3695 aa10.24□□□□□ -0.77
FARP1-242ENST00000627049 H1FX-AS1Q4G0G2 97 aa10.22□□□□□ -0.77
FARP1-242ENST00000627049 Q6ZSA8 131 aa10.21□□□□□ -0.77
FARP1-242ENST00000627049 CSMD1Q96PZ7 3565 aa10.21□□□□□ -0.78
FARP1-242ENST00000627049 DMBT1Q9UGM3 2413 aaPredicted RBP10.2□□□□□ -0.78
FARP1-242ENST00000627049 MUC3AQ02505 3323 aa10.2□□□□□ -0.78
FARP1-242ENST00000627049 Q6ZRN7 208 aaPredicted RBP10.18□□□□□ -0.78
FARP1-242ENST00000627049 SMG1Q96Q15 3661 aaKnown RBP10.16□□□□□ -0.78
FARP1-242ENST00000627049 RPL37P61927 97 aaKnown RBP10.15□□□□□ -0.78
FARP1-242ENST00000627049 ROMO1P60602 79 aa10.15□□□□□ -0.79
FARP1-242ENST00000627049 KMT2BQ9UMN6 2715 aaPredicted RBP10.12□□□□□ -0.79
FARP1-242ENST00000627049 KRTAP10-2P60368 255 aa10.12□□□□□ -0.79
FARP1-242ENST00000627049 KRTAP10-1P60331 282 aa10.09□□□□□ -0.79
FARP1-242ENST00000627049 KRTAP25-1Q3LHN0 102 aa10.08□□□□□ -0.8
FARP1-242ENST00000627049 S4R3F8 94 aa10.04□□□□□ -0.8
FARP1-242ENST00000627049 M0R2T5 61 aa10.02□□□□□ -0.8
FARP1-242ENST00000627049 FLG2Q5D862 2391 aaPredicted RBP10□□□□□ -0.81
FARP1-242ENST00000627049 KRTAP13-2Q52LG2 175 aa9.99□□□□□ -0.81
FARP1-242ENST00000627049 LUZP6Q538Z0 58 aa9.98□□□□□ -0.81
FARP1-242ENST00000627049 CELSR1Q9NYQ6 3014 aa9.96□□□□□ -0.81
FARP1-242ENST00000627049 Q5VSD8 79 aa9.92□□□□□ -0.82
FARP1-242ENST00000627049 SEC61BP60468 96 aaKnown RBP9.92□□□□□ -0.82
FARP1-242ENST00000627049 SVEP1Q4LDE5 3571 aa9.89□□□□□ -0.83
FARP1-242ENST00000627049 TENM3Q9P273 2699 aa9.87□□□□□ -0.83
FARP1-242ENST00000627049 CAMK2N1Q7Z7J9 78 aa9.86□□□□□ -0.83
FARP1-242ENST00000627049 RPS29P62273 56 aaKnown RBP9.84□□□□□ -0.83
FARP1-242ENST00000627049 R4GN34 69 aa9.76□□□□□ -0.85
FARP1-242ENST00000627049 A8MUU9 505 aa9.74□□□□□ -0.85
FARP1-242ENST00000627049 KRTAP13-3Q3SY46 172 aa9.68□□□□□ -0.86
FARP1-242ENST00000627049 H0YAA0 97 aa9.67□□□□□ -0.86
FARP1-242ENST00000627049 PDZD2O15018 2839 aa9.67□□□□□ -0.86
FARP1-242ENST00000627049 A0A0A0MQY5 61 aa9.66□□□□□ -0.86
FARP1-242ENST00000627049 SPENQ96T58 3664 aaKnown RBP9.66□□□□□ -0.86
FARP1-242ENST00000627049 CUBNO60494 3623 aa9.65□□□□□ -0.86
FARP1-242ENST00000627049 M0QZ58 72 aa9.65□□□□□ -0.86
FARP1-242ENST00000627049 KRTAP16-1A8MUX0 517 aa9.64□□□□□ -0.87
FARP1-242ENST00000627049 TENM1Q9UKZ4 2725 aa9.64□□□□□ -0.87
FARP1-242ENST00000627049 VWFP04275 2813 aa9.63□□□□□ -0.87
FARP1-242ENST00000627049 NDUFAF8A1L188 74 aa9.63□□□□□ -0.87
FARP1-242ENST00000627049 C20orf166-AS1Q96NR2 134 aa9.62□□□□□ -0.87
FARP1-242ENST00000627049 KRTAP21-3Q3LHN1 58 aa9.62□□□□□ -0.87
FARP1-242ENST00000627049 TGP01266 2768 aa9.6□□□□□ -0.87
FARP1-242ENST00000627049 TENM4Q6N022 2769 aa9.6□□□□□ -0.87
FARP1-242ENST00000627049 KRTAP1-4P0C5Y4 121 aa9.58□□□□□ -0.88
FARP1-242ENST00000627049 BSNQ9UPA5 3926 aa9.44□□□□□ -0.9
FARP1-242ENST00000627049 PKD1L1Q8TDX9 2849 aa9.42□□□□□ -0.9
FARP1-242ENST00000627049 C10orf95Q9H7T3 257 aa9.41□□□□□ -0.9
FARP1-242ENST00000627049 FBN1P35555 2871 aaKnown RBP9.36□□□□□ -0.91
FARP1-242ENST00000627049 PLAC4Q8WY50 150 aa9.35□□□□□ -0.91
FARP1-242ENST00000627049 OTOGQ6ZRI0 2925 aa9.3□□□□□ -0.92
FARP1-242ENST00000627049 NBPF19A0A087WUL8 3843 aa9.28□□□□□ -0.92
FARP1-242ENST00000627049 CSMD2Q7Z408 3487 aa9.28□□□□□ -0.92
FARP1-242ENST00000627049 SRRM2Q9UQ35 2752 aaKnown RBP9.25□□□□□ -0.93
FARP1-242ENST00000627049 P0C880 135 aa9.16□□□□□ -0.94
FARP1-242ENST00000627049 TENM2Q9NT68 2774 aa9.15□□□□□ -0.94
FARP1-242ENST00000627049 XP32Q5T750 250 aa9.14□□□□□ -0.95
FARP1-242ENST00000627049 ANK3Q12955 4377 aaKnown RBP9.08□□□□□ -0.96
FARP1-242ENST00000627049 FBN3Q75N90 2809 aa9.06□□□□□ -0.96
FARP1-242ENST00000627049 KRTAP3-1Q9BYR8 98 aa9.05□□□□□ -0.96
FARP1-242ENST00000627049 TRRAPQ9Y4A5 3859 aa9.05□□□□□ -0.96
FARP1-242ENST00000627049 ZFHX3Q15911 3703 aa9.03□□□□□ -0.96
FARP1-242ENST00000627049 VPS13CQ709C8 3753 aa9.02□□□□□ -0.97
FARP1-242ENST00000627049 PP632Q6XCG6 107 aa9□□□□□ -0.97
FARP1-242ENST00000627049 TPRXLQ17RH7 258 aa8.97□□□□□ -0.97
FARP1-242ENST00000627049 TNP1P09430 55 aa8.96□□□□□ -0.98
FARP1-242ENST00000627049 KRTAP12-2P59991 146 aa8.92□□□□□ -0.98
FARP1-242ENST00000627049 KRTAP10-8P60410 259 aa8.89□□□□□ -0.99
FARP1-242ENST00000627049 MEGF8Q7Z7M0 2845 aa8.88□□□□□ -0.99
FARP1-242ENST00000627049 KRTAP12-1P59990 96 aa8.81□□□□□ -1
FARP1-242ENST00000627049 KRTAP10-6P60371 365 aaPredicted RBP8.8□□□□□ -1
FARP1-242ENST00000627049 KRTAP13-4Q3LI77 160 aa8.79□□□□□ -1
FARP1-242ENST00000627049 COL7A1Q02388 2944 aa8.69□□□□□ -1.02
FARP1-242ENST00000627049 ZNF469Q96JG9 3925 aaPredicted RBP8.68□□□□□ -1.02
FARP1-242ENST00000627049 A0A1B0GVY2 172 aa8.63□□□□□ -1.03
FARP1-242ENST00000627049 AKAP9Q99996 3911 aa8.58□□□□□ -1.04
FARP1-242ENST00000627049 KRTAP15-1Q3LI76 137 aa8.56□□□□□ -1.04
FARP1-242ENST00000627049 KRTAP3-2Q9BYR7 98 aa8.55□□□□□ -1.04
FARP1-242ENST00000627049 KRTAP3-3Q9BYR6 98 aa8.52□□□□□ -1.05
FARP1-242ENST00000627049 HUWE1Q7Z6Z7 4374 aaKnown RBP8.52□□□□□ -1.05
FARP1-242ENST00000627049 CSMD3Q7Z407 3707 aa8.49□□□□□ -1.05
FARP1-242ENST00000627049 KRTAP10-10P60014 251 aa8.47□□□□□ -1.05
FARP1-242ENST00000627049 PRO2289Q9P1D8 64 aa8.41□□□□□ -1.06
FARP1-242ENST00000627049 KRTAP10-4P60372 401 aaPredicted RBP8.21□□□□□ -1.1
FARP1-242ENST00000627049 DNAH10Q8IVF4 4471 aa8.15□□□□□ -1.1
FARP1-242ENST00000627049 DNAH9Q9NYC9 4486 aa8.09□□□□□ -1.11
FARP1-242ENST00000627049 DNAH1Q9P2D7 4330 aa8.07□□□□□ -1.12
FARP1-242ENST00000627049 MT1HL1P0DM35 61 aa8.07□□□□□ -1.12
FARP1-242ENST00000627049 PLECQ15149 4684 aaKnown RBP8.04□□□□□ -1.12
FARP1-242ENST00000627049 ALMS1Q8TCU4 4167 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms