RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 LINC01554Q52M75 96 aa9.09□□□□□ -0.95
PMS1-221ENST00000624204 A0A1B0GU69 56 aa9.08□□□□□ -0.96
PMS1-221ENST00000624204 H3BS24 57 aa9.06□□□□□ -0.96
PMS1-221ENST00000624204 TGP01266 2768 aa9.04□□□□□ -0.96
PMS1-221ENST00000624204 J3QKU1 62 aa9.04□□□□□ -0.96
PMS1-221ENST00000624204 PLA2G1BP04054 148 aaKnown RBP9.03□□□□□ -0.96
PMS1-221ENST00000624204 C14orf177Q52M58 125 aa9.02□□□□□ -0.97
PMS1-221ENST00000624204 DNAH1Q9P2D7 4330 aa9.02□□□□□ -0.97
PMS1-221ENST00000624204 DMBT1Q9UGM3 2413 aaPredicted RBP9.02□□□□□ -0.97
PMS1-221ENST00000624204 KRTAP13-1Q8IUC0 172 aa9.01□□□□□ -0.97
PMS1-221ENST00000624204 RTL8CO15255 209 aa8.99□□□□□ -0.97
PMS1-221ENST00000624204 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.99□□□□□ -0.97
PMS1-221ENST00000624204 IGKV2D-30A0A075B6S6 120 aa8.98□□□□□ -0.97
PMS1-221ENST00000624204 IGKV2-30P06310 120 aa8.98□□□□□ -0.97
PMS1-221ENST00000624204 MIR22HGQ0VDD5 57 aa8.98□□□□□ -0.97
PMS1-221ENST00000624204 CSAG1Q6PB30 78 aa8.97□□□□□ -0.97
PMS1-221ENST00000624204 WWC2-AS2Q96NR7 200 aa8.96□□□□□ -0.98
PMS1-221ENST00000624204 FBN3Q75N90 2809 aa8.96□□□□□ -0.98
PMS1-221ENST00000624204 UQCR11O14957 56 aa8.95□□□□□ -0.98
PMS1-221ENST00000624204 SPATA8Q6RVD6 105 aa8.94□□□□□ -0.98
PMS1-221ENST00000624204 DMAC1Q96GE9 116 aa8.93□□□□□ -0.98
PMS1-221ENST00000624204 KRTAP24-1Q3LI83 254 aa8.92□□□□□ -0.98
PMS1-221ENST00000624204 ZNF706Q9Y5V0 76 aaPredicted RBP8.92□□□□□ -0.98
PMS1-221ENST00000624204 KRTAP13-3Q3SY46 172 aa8.91□□□□□ -0.98
PMS1-221ENST00000624204 LINC00483Q53H64 154 aa8.9□□□□□ -0.98
PMS1-221ENST00000624204 CRIPTQ9P021 101 aa8.89□□□□□ -0.99
PMS1-221ENST00000624204 PSORS1C2Q9UIG4 136 aa8.89□□□□□ -0.99
PMS1-221ENST00000624204 DNAH9Q9NYC9 4486 aa8.89□□□□□ -0.99
PMS1-221ENST00000624204 FRAS1Q86XX4 4008 aa8.86□□□□□ -0.99
PMS1-221ENST00000624204 SPACA4Q8TDM5 124 aa8.83□□□□□ -1
PMS1-221ENST00000624204 FAM229AH3BQW9 127 aa8.82□□□□□ -1
PMS1-221ENST00000624204 Q8N1X5 172 aa8.82□□□□□ -1
PMS1-221ENST00000624204 ZNF861PO60384 105 aa8.8□□□□□ -1
PMS1-221ENST00000624204 IGLV5-52A0A0A0MRZ9 124 aa8.79□□□□□ -1
PMS1-221ENST00000624204 MEGF8Q7Z7M0 2845 aa8.79□□□□□ -1
PMS1-221ENST00000624204 ALMS1Q8TCU4 4167 aa8.78□□□□□ -1
PMS1-221ENST00000624204 HUWE1Q7Z6Z7 4374 aaKnown RBP8.78□□□□□ -1
PMS1-221ENST00000624204 APLNQ9ULZ1 77 aa8.77□□□□□ -1
PMS1-221ENST00000624204 NBDYA0A0U1RRE5 68 aa8.77□□□□□ -1.01
PMS1-221ENST00000624204 DNAH7Q8WXX0 4024 aa8.77□□□□□ -1.01
PMS1-221ENST00000624204 CMYA5Q8N3K9 4069 aa8.72□□□□□ -1.01
PMS1-221ENST00000624204 C1orf134Q5TEV5 83 aa8.7□□□□□ -1.02
PMS1-221ENST00000624204 Q6ZRN7 208 aaPredicted RBP8.7□□□□□ -1.02
PMS1-221ENST00000624204 IGLV7-43P04211 117 aa8.67□□□□□ -1.02
PMS1-221ENST00000624204 DNAH8Q96JB1 4490 aa8.65□□□□□ -1.02
PMS1-221ENST00000624204 A0A087WTM6 91 aa8.65□□□□□ -1.02
PMS1-221ENST00000624204 DNAH3Q8TD57 4116 aa8.61□□□□□ -1.03
PMS1-221ENST00000624204 PLECQ15149 4684 aaKnown RBP8.61□□□□□ -1.03
PMS1-221ENST00000624204 SSBP3-AS1Q7Z2R9 100 aa8.61□□□□□ -1.03
PMS1-221ENST00000624204 KRTAP16-1A8MUX0 517 aa8.54□□□□□ -1.04
PMS1-221ENST00000624204 KRTAP25-1Q3LHN0 102 aa8.54□□□□□ -1.04
PMS1-221ENST00000624204 DNAH17Q9UFH2 4485 aa8.53□□□□□ -1.04
PMS1-221ENST00000624204 H0YAA0 97 aa8.52□□□□□ -1.05
PMS1-221ENST00000624204 Q6ZSA8 131 aa8.52□□□□□ -1.05
PMS1-221ENST00000624204 LY6G6CO95867 125 aa8.51□□□□□ -1.05
PMS1-221ENST00000624204 A8MUU9 505 aa8.51□□□□□ -1.05
PMS1-221ENST00000624204 LINC00304Q8N9R0 145 aa8.51□□□□□ -1.05
PMS1-221ENST00000624204 TYMSOSQ8TAI1 123 aa8.51□□□□□ -1.05
PMS1-221ENST00000624204 ROMO1P60602 79 aa8.5□□□□□ -1.05
PMS1-221ENST00000624204 C9orf92A6NGG3 77 aa8.48□□□□□ -1.05
PMS1-221ENST00000624204 NUPR2A6NF83 97 aa8.48□□□□□ -1.05
PMS1-221ENST00000624204 KRTAP13-2Q52LG2 175 aa8.48□□□□□ -1.05
PMS1-221ENST00000624204 KMT2AQ03164 3969 aa8.46□□□□□ -1.06
PMS1-221ENST00000624204 A0A1B0GU33 70 aa8.44□□□□□ -1.06
PMS1-221ENST00000624204 HECTD4Q9Y4D8 3996 aa8.43□□□□□ -1.06
PMS1-221ENST00000624204 A0A0D9SG42 100 aa8.41□□□□□ -1.06
PMS1-221ENST00000624204 STARD9Q9P2P6 4700 aa8.37□□□□□ -1.07
PMS1-221ENST00000624204 KRTAP10-2P60368 255 aa8.37□□□□□ -1.07
PMS1-221ENST00000624204 SPINT4Q6UDR6 99 aa8.36□□□□□ -1.07
PMS1-221ENST00000624204 DNAH11Q96DT5 4516 aa8.35□□□□□ -1.07
PMS1-221ENST00000624204 DNAH6Q9C0G6 4158 aa8.35□□□□□ -1.07
PMS1-221ENST00000624204 K7ERS5 55 aa8.34□□□□□ -1.07
PMS1-221ENST00000624204 H1FX-AS1Q4G0G2 97 aa8.33□□□□□ -1.08
PMS1-221ENST00000624204 VPS13DQ5THJ4 4388 aa8.3□□□□□ -1.08
PMS1-221ENST00000624204 DNAH2Q9P225 4427 aa8.27□□□□□ -1.08
PMS1-221ENST00000624204 DYNC2H1Q8NCM8 4307 aaKnown RBP8.27□□□□□ -1.09
PMS1-221ENST00000624204 P0C880 135 aa8.26□□□□□ -1.09
PMS1-221ENST00000624204 LRP1BQ9NZR2 4599 aa8.25□□□□□ -1.09
PMS1-221ENST00000624204 SMR3BP02814 79 aaPredicted RBP8.23□□□□□ -1.09
PMS1-221ENST00000624204 C10orf95Q9H7T3 257 aa8.23□□□□□ -1.09
PMS1-221ENST00000624204 KRTAP1-4P0C5Y4 121 aa8.23□□□□□ -1.09
PMS1-221ENST00000624204 KRTAP10-1P60331 282 aa8.2□□□□□ -1.1
PMS1-221ENST00000624204 KRTAP3-1Q9BYR8 98 aa8.2□□□□□ -1.1
PMS1-221ENST00000624204 COX6B2Q6YFQ2 88 aa8.19□□□□□ -1.1
PMS1-221ENST00000624204 PRKDCP78527 4128 aaKnown RBP8.13□□□□□ -1.11
PMS1-221ENST00000624204 NDUFAF8A1L188 74 aa8.13□□□□□ -1.11
PMS1-221ENST00000624204 RPL37P61927 97 aaKnown RBP8.06□□□□□ -1.12
PMS1-221ENST00000624204 VPS13BQ7Z7G8 4022 aa8.06□□□□□ -1.12
PMS1-221ENST00000624204 DNAH5Q8TE73 4624 aa8.05□□□□□ -1.12
PMS1-221ENST00000624204 TPRXLQ17RH7 258 aa8.04□□□□□ -1.12
PMS1-221ENST00000624204 C20orf166-AS1Q96NR2 134 aa8□□□□□ -1.13
PMS1-221ENST00000624204 FAT2Q9NYQ8 4349 aa7.99□□□□□ -1.13
PMS1-221ENST00000624204 KRTAP13-4Q3LI77 160 aa7.96□□□□□ -1.13
PMS1-221ENST00000624204 FAT1Q14517 4588 aa7.93□□□□□ -1.14
PMS1-221ENST00000624204 MYCBP2O75592 4640 aa7.9□□□□□ -1.14
PMS1-221ENST00000624204 KRTAP10-6P60371 365 aaPredicted RBP7.9□□□□□ -1.14
PMS1-221ENST00000624204 RPS29P62273 56 aaKnown RBP7.88□□□□□ -1.15
PMS1-221ENST00000624204 HYDINQ4G0P3 5121 aa7.86□□□□□ -1.15
PMS1-221ENST00000624204 KRTAP15-1Q3LI76 137 aa7.84□□□□□ -1.15
PMS1-221ENST00000624204 PKHD1P08F94 4074 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms