RNA–Protein interactions for RNA: ENST00000623196.1

C9orf139-202, Transcript of chromosome 9 open reading frame 139, humanhuman

TSL 2 BASIC

Gene C9orf139, Length 4,990 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139-202ENST00000623196 RPL37P61927 97 aaKnown RBP8.97□□□□□ -0.97
C9orf139-202ENST00000623196 R4GN34 69 aa8.97□□□□□ -0.97
C9orf139-202ENST00000623196 DCHS2Q6V1P9 2916 aa8.96□□□□□ -0.97
C9orf139-202ENST00000623196 CSMD1Q96PZ7 3565 aa8.96□□□□□ -0.98
C9orf139-202ENST00000623196 KRTAP1-5Q9BYS1 174 aa8.96□□□□□ -0.98
C9orf139-202ENST00000623196 M0R2T5 61 aa8.94□□□□□ -0.98
C9orf139-202ENST00000623196 APCP25054 2843 aa8.93□□□□□ -0.98
C9orf139-202ENST00000623196 NSD1Q96L73 2696 aaPredicted RBP8.93□□□□□ -0.98
C9orf139-202ENST00000623196 ROMO1P60602 79 aa8.9□□□□□ -0.98
C9orf139-202ENST00000623196 Q6ZR54 194 aa8.88□□□□□ -0.99
C9orf139-202ENST00000623196 KRTAP4-16G5E9R7 235 aaPredicted RBP8.86□□□□□ -0.99
C9orf139-202ENST00000623196 KRTAP29-1A8MX34 341 aaPredicted RBP8.86□□□□□ -0.99
C9orf139-202ENST00000623196 ASB16-AS1Q495Z4 193 aa8.85□□□□□ -0.99
C9orf139-202ENST00000623196 H1FX-AS1Q4G0G2 97 aa8.85□□□□□ -0.99
C9orf139-202ENST00000623196 MXRA5Q9NR99 2828 aa8.81□□□□□ -1
C9orf139-202ENST00000623196 NIPBLQ6KC79 2804 aaeCLIP8.79□□□□□ -1
C9orf139-202ENST00000623196 SEC61BP60468 96 aaKnown RBP8.79□□□□□ -1
C9orf139-202ENST00000623196 PANO1I0J062 215 aa8.77□□□□□ -1.01
C9orf139-202ENST00000623196 SVEP1Q4LDE5 3571 aa8.77□□□□□ -1.01
C9orf139-202ENST00000623196 M0QZ58 72 aa8.76□□□□□ -1.01
C9orf139-202ENST00000623196 KRTAP7-1Q8IUC3 87 aa8.74□□□□□ -1.01
C9orf139-202ENST00000623196 SPATA8Q6RVD6 105 aa8.73□□□□□ -1.01
C9orf139-202ENST00000623196 KRTAP10-1P60331 282 aa8.72□□□□□ -1.01
C9orf139-202ENST00000623196 CELSR1Q9NYQ6 3014 aa8.72□□□□□ -1.01
C9orf139-202ENST00000623196 KRTAP11-1Q8IUC1 163 aa8.71□□□□□ -1.01
C9orf139-202ENST00000623196 KRTAP10-2P60368 255 aa8.68□□□□□ -1.02
C9orf139-202ENST00000623196 A0A087X002 238 aa8.65□□□□□ -1.03
C9orf139-202ENST00000623196 Q5VSD8 79 aa8.65□□□□□ -1.03
C9orf139-202ENST00000623196 NOTCH2NLQ7Z3S9 236 aa8.65□□□□□ -1.03
C9orf139-202ENST00000623196 ADM2Q7Z4H4 148 aa8.63□□□□□ -1.03
C9orf139-202ENST00000623196 A6NN06 94 aa8.61□□□□□ -1.03
C9orf139-202ENST00000623196 KMT2BQ9UMN6 2715 aaPredicted RBP8.6□□□□□ -1.03
C9orf139-202ENST00000623196 CUBNO60494 3623 aa8.59□□□□□ -1.03
C9orf139-202ENST00000623196 LCE6AA0A183 80 aa8.59□□□□□ -1.03
C9orf139-202ENST00000623196 KRTAP16-1A8MUX0 517 aa8.57□□□□□ -1.04
C9orf139-202ENST00000623196 KRTAP25-1Q3LHN0 102 aa8.56□□□□□ -1.04
C9orf139-202ENST00000623196 PLAC4Q8WY50 150 aa8.53□□□□□ -1.04
C9orf139-202ENST00000623196 SPENQ96T58 3664 aaKnown RBP8.53□□□□□ -1.04
C9orf139-202ENST00000623196 A8MU10 97 aa8.51□□□□□ -1.05
C9orf139-202ENST00000623196 RPS29P62273 56 aaKnown RBP8.45□□□□□ -1.06
C9orf139-202ENST00000623196 Q6ZRN7 208 aaPredicted RBP8.44□□□□□ -1.06
C9orf139-202ENST00000623196 TENM3Q9P273 2699 aa8.41□□□□□ -1.06
C9orf139-202ENST00000623196 A8MUU9 505 aa8.39□□□□□ -1.07
C9orf139-202ENST00000623196 KRTAP13-1Q8IUC0 172 aa8.39□□□□□ -1.07
C9orf139-202ENST00000623196 NDUFAF8A1L188 74 aa8.38□□□□□ -1.07
C9orf139-202ENST00000623196 TENM1Q9UKZ4 2725 aa8.36□□□□□ -1.07
C9orf139-202ENST00000623196 TENM4Q6N022 2769 aa8.35□□□□□ -1.07
C9orf139-202ENST00000623196 KRTAP13-2Q52LG2 175 aa8.34□□□□□ -1.07
C9orf139-202ENST00000623196 VWFP04275 2813 aa8.32□□□□□ -1.08
C9orf139-202ENST00000623196 C20orf166-AS1Q96NR2 134 aa8.31□□□□□ -1.08
C9orf139-202ENST00000623196 BSNQ9UPA5 3926 aa8.28□□□□□ -1.08
C9orf139-202ENST00000623196 NBPF19A0A087WUL8 3843 aa8.26□□□□□ -1.09
C9orf139-202ENST00000623196 CSMD2Q7Z408 3487 aa8.26□□□□□ -1.09
C9orf139-202ENST00000623196 PDZD2O15018 2839 aa8.23□□□□□ -1.09
C9orf139-202ENST00000623196 FBN1P35555 2871 aaKnown RBP8.23□□□□□ -1.09
C9orf139-202ENST00000623196 KRTAP21-3Q3LHN1 58 aa8.2□□□□□ -1.1
C9orf139-202ENST00000623196 TNP1P09430 55 aa8.18□□□□□ -1.1
C9orf139-202ENST00000623196 OTOGQ6ZRI0 2925 aa8.09□□□□□ -1.11
C9orf139-202ENST00000623196 PKD1L1Q8TDX9 2849 aa8.09□□□□□ -1.11
C9orf139-202ENST00000623196 C10orf95Q9H7T3 257 aa8.09□□□□□ -1.12
C9orf139-202ENST00000623196 ZFHX3Q15911 3703 aa8.04□□□□□ -1.12
C9orf139-202ENST00000623196 PP632Q6XCG6 107 aa8.03□□□□□ -1.12
C9orf139-202ENST00000623196 VPS13CQ709C8 3753 aa8□□□□□ -1.13
C9orf139-202ENST00000623196 TGP01266 2768 aa7.99□□□□□ -1.13
C9orf139-202ENST00000623196 TRRAPQ9Y4A5 3859 aa7.95□□□□□ -1.14
C9orf139-202ENST00000623196 H0YAA0 97 aa7.94□□□□□ -1.14
C9orf139-202ENST00000623196 ANK3Q12955 4377 aaKnown RBP7.93□□□□□ -1.14
C9orf139-202ENST00000623196 TENM2Q9NT68 2774 aa7.92□□□□□ -1.14
C9orf139-202ENST00000623196 KRTAP1-4P0C5Y4 121 aa7.92□□□□□ -1.14
C9orf139-202ENST00000623196 P0C880 135 aa7.91□□□□□ -1.14
C9orf139-202ENST00000623196 XP32Q5T750 250 aa7.86□□□□□ -1.15
C9orf139-202ENST00000623196 KRTAP10-8P60410 259 aa7.85□□□□□ -1.15
C9orf139-202ENST00000623196 SRRM2Q9UQ35 2752 aaKnown RBP7.82□□□□□ -1.16
C9orf139-202ENST00000623196 KRTAP13-3Q3SY46 172 aa7.75□□□□□ -1.17
C9orf139-202ENST00000623196 FBN3Q75N90 2809 aa7.69□□□□□ -1.18
C9orf139-202ENST00000623196 A0A1B0GVY2 172 aa7.68□□□□□ -1.18
C9orf139-202ENST00000623196 TPRXLQ17RH7 258 aa7.67□□□□□ -1.18
C9orf139-202ENST00000623196 ZNF469Q96JG9 3925 aaPredicted RBP7.65□□□□□ -1.19
C9orf139-202ENST00000623196 KRTAP10-10P60014 251 aa7.56□□□□□ -1.2
C9orf139-202ENST00000623196 MEGF8Q7Z7M0 2845 aa7.54□□□□□ -1.2
C9orf139-202ENST00000623196 AKAP9Q99996 3911 aa7.53□□□□□ -1.2
C9orf139-202ENST00000623196 PRO2289Q9P1D8 64 aa7.53□□□□□ -1.2
C9orf139-202ENST00000623196 CSMD3Q7Z407 3707 aa7.51□□□□□ -1.21
C9orf139-202ENST00000623196 COL7A1Q02388 2944 aa7.41□□□□□ -1.22
C9orf139-202ENST00000623196 KRTAP12-2P59991 146 aa7.4□□□□□ -1.23
C9orf139-202ENST00000623196 HUWE1Q7Z6Z7 4374 aaKnown RBP7.39□□□□□ -1.23
C9orf139-202ENST00000623196 KRTAP3-1Q9BYR8 98 aa7.37□□□□□ -1.23
C9orf139-202ENST00000623196 KRTAP13-4Q3LI77 160 aa7.32□□□□□ -1.24
C9orf139-202ENST00000623196 KRTAP12-1P59990 96 aa7.3□□□□□ -1.24
C9orf139-202ENST00000623196 DNAH10Q8IVF4 4471 aa7.11□□□□□ -1.27
C9orf139-202ENST00000623196 KRTAP10-6P60371 365 aaPredicted RBP7.09□□□□□ -1.27
C9orf139-202ENST00000623196 DNAH9Q9NYC9 4486 aa7.05□□□□□ -1.28
C9orf139-202ENST00000623196 PLECQ15149 4684 aaKnown RBP7.02□□□□□ -1.29
C9orf139-202ENST00000623196 KRTAP15-1Q3LI76 137 aa7□□□□□ -1.29
C9orf139-202ENST00000623196 DNAH1Q9P2D7 4330 aa6.97□□□□□ -1.29
C9orf139-202ENST00000623196 KRTAP3-3Q9BYR6 98 aa6.93□□□□□ -1.3
C9orf139-202ENST00000623196 KRTAP3-2Q9BYR7 98 aa6.9□□□□□ -1.3
C9orf139-202ENST00000623196 DNAH11Q96DT5 4516 aa6.9□□□□□ -1.31
C9orf139-202ENST00000623196 KRTAP10-4P60372 401 aaPredicted RBP6.87□□□□□ -1.31
C9orf139-202ENST00000623196 INE1O15225 51 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms